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The map label for this gene is 45657898

Identifier: 45657898

GI number: 45657898

Start: 2479593

End: 2480417

Strand: Direct

Name: 45657898

Synonym: LIC12049

Alternate gene names: NA

Gene position: 2479593-2480417 (Clockwise)

Preceding gene: 45657887

Following gene: 45657899

Centisome position: 57.97

GC content: 37.09

Gene sequence:

>825_bases
GTGAAGCAGTCTAAAACATTACAAATTCATTCGAAACTTTTTTTTCTAACATTCTTATTTTTAATTACATGTAAAGCTCC
CAGTTCAGGCGATTCTAGCAACCTTCTTGGCTTATTCGCTTTGAATTCTTTCAATCAAGCAAATGGACCGACAAACCCAG
TGAAACCTACAGAGTCACCAAATCTTGTTGTCAAAATAAATTCATCTTTAATCTCAGAAGGCAATACAGTAACGATTCCT
AGTGCAGTCATCAATACCCATGGAACGTCCTTAAACATAGAAGTTTTCAATAGTGGCACTACGGATCTAGAAATCAATTC
CGTCTTCTTATCAAATGGTGACACAAGTCAATTCTCTATGAATACTTCTACATTTGTTAAAAAAATCAAACCTTCCGCAA
ATTCTTCTTTCTCGATTGCTCTTGCACCGACTACCTATGGTAACAAAGCAGTCTTTCTATTTATTTCTAGTAATGATCAG
AAAAACAAAAATTTTAATTTCTCATTGCAAGGAACGGCACAATTGACTCCAGCTCCTTCCATTATGATTACTATGGGTCA
AGACATTCTTCAGTCCGGCAATTCAATTGACATCGGCGGCCTCAGTACTTGTTCCTCTGGAAAAGATTACTCATTTAAAA
TTAAAAATTATGGAACGGCAGATTTGAATTTAACCGGTGCACCTATCATACAAATTTCTGGAACCAATGCGAACCTTTTC
AGTATCTCTCAACTACCGACCACAATTCTAACCCCGGAATCGGAGACGGATTTTAAAATACGTTTTACCCCATCCGGCCT
GGTACAAGGAATGCAGGATTCTTAA

Upstream 100 bases:

>100_bases
AAAACAAAAGTGAAAAAGAAATCACTTATAAATTAAAGACTATTCACATATCTTTCTTTGATTCCCTTGACTCAAGGAAA
TCAAAAATAATTCTGGCTCC

Downstream 100 bases:

>100_bases
TACAAAATAATGATAGCTCCAATAGTGGATTCGCGTTCAATCTTACGGCATTAGAAACCAATCCTGAAATTAATCTTTCT
TTCAATTCAAATACGGTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MKQSKTLQIHSKLFFLTFLFLITCKAPSSGDSSNLLGLFALNSFNQANGPTNPVKPTESPNLVVKINSSLISEGNTVTIP
SAVINTHGTSLNIEVFNSGTTDLEINSVFLSNGDTSQFSMNTSTFVKKIKPSANSSFSIALAPTTYGNKAVFLFISSNDQ
KNKNFNFSLQGTAQLTPAPSIMITMGQDILQSGNSIDIGGLSTCSSGKDYSFKIKNYGTADLNLTGAPIIQISGTNANLF
SISQLPTTILTPESETDFKIRFTPSGLVQGMQDS

Sequences:

>Translated_274_residues
MKQSKTLQIHSKLFFLTFLFLITCKAPSSGDSSNLLGLFALNSFNQANGPTNPVKPTESPNLVVKINSSLISEGNTVTIP
SAVINTHGTSLNIEVFNSGTTDLEINSVFLSNGDTSQFSMNTSTFVKKIKPSANSSFSIALAPTTYGNKAVFLFISSNDQ
KNKNFNFSLQGTAQLTPAPSIMITMGQDILQSGNSIDIGGLSTCSSGKDYSFKIKNYGTADLNLTGAPIIQISGTNANLF
SISQLPTTILTPESETDFKIRFTPSGLVQGMQDS
>Mature_274_residues
MKQSKTLQIHSKLFFLTFLFLITCKAPSSGDSSNLLGLFALNSFNQANGPTNPVKPTESPNLVVKINSSLISEGNTVTIP
SAVINTHGTSLNIEVFNSGTTDLEINSVFLSNGDTSQFSMNTSTFVKKIKPSANSSFSIALAPTTYGNKAVFLFISSNDQ
KNKNFNFSLQGTAQLTPAPSIMITMGQDILQSGNSIDIGGLSTCSSGKDYSFKIKNYGTADLNLTGAPIIQISGTNANLF
SISQLPTTILTPESETDFKIRFTPSGLVQGMQDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29222; Mature: 29222

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSKTLQIHSKLFFLTFLFLITCKAPSSGDSSNLLGLFALNSFNQANGPTNPVKPTESP
CCCCCEEEEHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC
NLVVKINSSLISEGNTVTIPSAVINTHGTSLNIEVFNSGTTDLEINSVFLSNGDTSQFSM
CEEEEECHHHHCCCCEEEECHHHEECCCCEEEEEEEECCCCEEEEEEEEEECCCCCEEEE
NTSTFVKKIKPSANSSFSIALAPTTYGNKAVFLFISSNDQKNKNFNFSLQGTAQLTPAPS
CHHHHHHEECCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEECCEEECCCCE
IMITMGQDILQSGNSIDIGGLSTCSSGKDYSFKIKNYGTADLNLTGAPIIQISGTNANLF
EEEEECHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCEE
SISQLPTTILTPESETDFKIRFTPSGLVQGMQDS
EECCCCEEEECCCCCCCEEEEECCHHHCCCCCCC
>Mature Secondary Structure
MKQSKTLQIHSKLFFLTFLFLITCKAPSSGDSSNLLGLFALNSFNQANGPTNPVKPTESP
CCCCCEEEEHHHHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCC
NLVVKINSSLISEGNTVTIPSAVINTHGTSLNIEVFNSGTTDLEINSVFLSNGDTSQFSM
CEEEEECHHHHCCCCEEEECHHHEECCCCEEEEEEEECCCCEEEEEEEEEECCCCCEEEE
NTSTFVKKIKPSANSSFSIALAPTTYGNKAVFLFISSNDQKNKNFNFSLQGTAQLTPAPS
CHHHHHHEECCCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEECCEEECCCCE
IMITMGQDILQSGNSIDIGGLSTCSSGKDYSFKIKNYGTADLNLTGAPIIQISGTNANLF
EEEEECHHHHHCCCEEEECCCCCCCCCCCEEEEECCCCCEEEEECCCCEEEEECCCCCEE
SISQLPTTILTPESETDFKIRFTPSGLVQGMQDS
EECCCCEEEECCCCCCCEEEEECCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA