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The map label for this gene is flhO

Identifier: 45657887

GI number: 45657887

Start: 2456309

End: 2457172

Strand: Direct

Name: flhO

Synonym: LIC12035

Alternate gene names: 45657887

Gene position: 2456309-2457172 (Clockwise)

Preceding gene: 45657886

Following gene: 45657898

Centisome position: 57.43

GC content: 42.71

Gene sequence:

>864_bases
ATGCTTAGAGGAATCTATACAGGCGCAAACGGGATGATTATCCAGCAAACTAGAATGGACGTGATTTCGAACAATCTCGC
TAACGTCGATAAGACCGCCTTTAAAAGAGACACCACAATTTTTAAAACATTCCCCGAACTCCTGCTCCACCGTTTCGACG
AGGATGGTGTTGGTAAGGTTCCTATGGGTTCCTTTGATACTGCGCCTGTAATCGGTAAATTAGGGTTAGGCGGAGAAGTA
AACGAAGTTTATACTCGTTTCGAACAAGGCGCCGTCAAAAAAACAGAAAATCCTTTTGATTTGATGCTTCAAGACAAACC
CGGTAGCGAACATCCAGCATTTTTTTCCGTTATGACAAACAGAGGCGAAAGACTTTCCAGAAGCGGTGCATTCGTGATGG
ACACCAACGGCTTTCTTGTCACTCCACAGGGTTTTCCTTTGTTAGGTGAGAACGGCCCAATCCGAGTTGCAAGAGGAAAT
TTTTTGATTAAGGAAAACGGCGAAGTCTGGATCAACGGAGAAATCGGCAACGATCCTGTGAACGGAACTTCCATCGATAA
GAATCGTTTCGAAACTCCTGTATTATTGGATAAAATCAAAATTCGTACGGTTGAAAATCCACGTCATCTTGATAAAGAAG
GTGATTCTTTTTATGCCGATACCCCAGAGTCCGGGGAACCGGTTCCTTTTGATCTTAAGGACGAACCTTCCGTTTTACAG
GGTTATCTCGAAGCGTCTAACGTGAGCGTTGTTACCGAAATGGTCGAAATGATCGAAGTCAATCGTTCTTATGAAGCAAA
TCAAAAGACGGTTCAAACTCAAGATAGTTTACTTGGAAAATTGATAAACGAAGTACTGAGATAA

Upstream 100 bases:

>100_bases
TGAGATCAGTAATTTCTTCCTAATTTCTCTCATTTATGTCTTCAAAATTGTTATGTGATTTTAAAAAATTTCCGATCTTT
AAAATGTTCAGGAGAAGTAT

Downstream 100 bases:

>100_bases
TCATCCCTTCCTTCCGATCCCAACTGCTGGACCTAACGGCCCTCGGGGATCGGAACCAAAGGATAATCTACCACATCTCT
TCGTCTCACCAACAACAGCA

Product: hook protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MLRGIYTGANGMIIQQTRMDVISNNLANVDKTAFKRDTTIFKTFPELLLHRFDEDGVGKVPMGSFDTAPVIGKLGLGGEV
NEVYTRFEQGAVKKTENPFDLMLQDKPGSEHPAFFSVMTNRGERLSRSGAFVMDTNGFLVTPQGFPLLGENGPIRVARGN
FLIKENGEVWINGEIGNDPVNGTSIDKNRFETPVLLDKIKIRTVENPRHLDKEGDSFYADTPESGEPVPFDLKDEPSVLQ
GYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKLINEVLR

Sequences:

>Translated_287_residues
MLRGIYTGANGMIIQQTRMDVISNNLANVDKTAFKRDTTIFKTFPELLLHRFDEDGVGKVPMGSFDTAPVIGKLGLGGEV
NEVYTRFEQGAVKKTENPFDLMLQDKPGSEHPAFFSVMTNRGERLSRSGAFVMDTNGFLVTPQGFPLLGENGPIRVARGN
FLIKENGEVWINGEIGNDPVNGTSIDKNRFETPVLLDKIKIRTVENPRHLDKEGDSFYADTPESGEPVPFDLKDEPSVLQ
GYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKLINEVLR
>Mature_287_residues
MLRGIYTGANGMIIQQTRMDVISNNLANVDKTAFKRDTTIFKTFPELLLHRFDEDGVGKVPMGSFDTAPVIGKLGLGGEV
NEVYTRFEQGAVKKTENPFDLMLQDKPGSEHPAFFSVMTNRGERLSRSGAFVMDTNGFLVTPQGFPLLGENGPIRVARGN
FLIKENGEVWINGEIGNDPVNGTSIDKNRFETPVLLDKIKIRTVENPRHLDKEGDSFYADTPESGEPVPFDLKDEPSVLQ
GYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKLINEVLR

Specific function: Not required for motility [H]

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787318, Length=287, Percent_Identity=32.7526132404181, Blast_Score=113, Evalue=2e-26,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 31875; Mature: 31875

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRGIYTGANGMIIQQTRMDVISNNLANVDKTAFKRDTTIFKTFPELLLHRFDEDGVGKV
CCCEEEECCCCEEEEHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
PMGSFDTAPVIGKLGLGGEVNEVYTRFEQGAVKKTENPFDLMLQDKPGSEHPAFFSVMTN
CCCCCCCCCHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEECC
RGERLSRSGAFVMDTNGFLVTPQGFPLLGENGPIRVARGNFLIKENGEVWINGEIGNDPV
CCHHHHCCCCEEEECCCEEECCCCCEEECCCCCEEEECCCEEEEECCCEEEECCCCCCCC
NGTSIDKNRFETPVLLDKIKIRTVENPRHLDKEGDSFYADTPESGEPVPFDLKDEPSVLQ
CCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHH
GYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKLINEVLR
HHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLRGIYTGANGMIIQQTRMDVISNNLANVDKTAFKRDTTIFKTFPELLLHRFDEDGVGKV
CCCEEEECCCCEEEEHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCC
PMGSFDTAPVIGKLGLGGEVNEVYTRFEQGAVKKTENPFDLMLQDKPGSEHPAFFSVMTN
CCCCCCCCCHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCEEEEEECC
RGERLSRSGAFVMDTNGFLVTPQGFPLLGENGPIRVARGNFLIKENGEVWINGEIGNDPV
CCHHHHCCCCEEEECCCEEECCCCCEEECCCCCEEEECCCEEEEECCCEEEECCCCCCCC
NGTSIDKNRFETPVLLDKIKIRTVENPRHLDKEGDSFYADTPESGEPVPFDLKDEPSVLQ
CCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHH
GYLEASNVSVVTEMVEMIEVNRSYEANQKTVQTQDSLLGKLINEVLR
HHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7836311; 9353933; 9384377 [H]