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The map label for this gene is 45657531

Identifier: 45657531

GI number: 45657531

Start: 2024601

End: 2025155

Strand: Reverse

Name: 45657531

Synonym: LIC11661

Alternate gene names: NA

Gene position: 2025155-2024601 (Counterclockwise)

Preceding gene: 45657532

Following gene: 45657530

Centisome position: 47.35

GC content: 37.84

Gene sequence:

>555_bases
ATGGACATTCTTGCGCAGCCGGTGCTTGTGCTGAATGCCGGTTACGTCCCCATCGGGATCCGGTCGGTCAAAGACGCCCT
CATCCTGATTATTCTTGAAAAAGCACAACTCATCAAAGATGATAAAAGTCTTTTCATTCGATCCGAAAAACTAAGATTTA
CAGCACCTAGGATCATACTTTTAAGAGACTATTATAAAGTTCCTCCCAGAAAAGATAAAGTTTCCAGAGAAAACATATTT
CAAAGAGATAATTACCACTGTGTATATTGTGGTAAAAAATTTCCAAGTTCTAAACTTACATTGGATCACGTAATTCCAAG
AAGTAGATGGGAACACGTTCCTAAAAAAGAAAGACCAAAAGAATTTAATTCTTGGGAAAATTTAGTCGCAGCCTGTAAAA
ACTGTAATACCCGGAAAGGAAATAAACTTCTAACAGAATTGAAGTGGAATTTACCGGAAGAAAATCGGGTGACACCTAAA
CTACGATTTCCACTCTTTTCAATAACGGATCAGCAGGCTGAAAAGTTTGGCTGGAGGGAGTATATTTCTTTTTGA

Upstream 100 bases:

>100_bases
TTTTTTGTTGTTTGGAATCGTTTATTGGATTCGCAAGAAACGTTCCTAAACTCGAGAATTTCTTTACATCTTCCAAGCGC
AGATTATTGTTTGACCAGTT

Downstream 100 bases:

>100_bases
AACGACTTTATTTTCTACTTATATTTCTGATGTTTTTTCTTTTTATCGGATGTCCTCATTATTCTACCACACGTCTGATC
TCCACTCCTCCTACTTTGAT

Product: HNH endonuclease family protein

Products: NA

Alternate protein names: HNH Endonuclease Family Protein; Endonuclease; HNH Endonuclease Domain-Containing Protein; Restriction Endonuclease; HNH Endonuclease Domain Protein; HNH Nuclease; Hnh Endonuclease; McrA/HNH Family Nuclease; 5-Methylcytosine-Specific Restriction A; 5-Methylcytosine-Specific Restriction Protein; Restriction Endonuclease McrA/HNH Family; HNH EndonucleaseHNH Nuclease; HNH Family Endonuclease; LOW QUALITY PROTEIN Endonuclease; Hnh Endonuclease Domain Protein; 5-Methylcytosine-Specific Restriction Protein A

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MDILAQPVLVLNAGYVPIGIRSVKDALILIILEKAQLIKDDKSLFIRSEKLRFTAPRIILLRDYYKVPPRKDKVSRENIF
QRDNYHCVYCGKKFPSSKLTLDHVIPRSRWEHVPKKERPKEFNSWENLVAACKNCNTRKGNKLLTELKWNLPEENRVTPK
LRFPLFSITDQQAEKFGWREYISF

Sequences:

>Translated_184_residues
MDILAQPVLVLNAGYVPIGIRSVKDALILIILEKAQLIKDDKSLFIRSEKLRFTAPRIILLRDYYKVPPRKDKVSRENIF
QRDNYHCVYCGKKFPSSKLTLDHVIPRSRWEHVPKKERPKEFNSWENLVAACKNCNTRKGNKLLTELKWNLPEENRVTPK
LRFPLFSITDQQAEKFGWREYISF
>Mature_184_residues
MDILAQPVLVLNAGYVPIGIRSVKDALILIILEKAQLIKDDKSLFIRSEKLRFTAPRIILLRDYYKVPPRKDKVSRENIF
QRDNYHCVYCGKKFPSSKLTLDHVIPRSRWEHVPKKERPKEFNSWENLVAACKNCNTRKGNKLLTELKWNLPEENRVTPK
LRFPLFSITDQQAEKFGWREYISF

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21730; Mature: 21730

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILAQPVLVLNAGYVPIGIRSVKDALILIILEKAQLIKDDKSLFIRSEKLRFTAPRIIL
CCCCCCCEEEEECCCCEECHHHHHHHHEEEEEHHHHHHHCCHHHEEECCCEEECCCEEEE
LRDYYKVPPRKDKVSRENIFQRDNYHCVYCGKKFPSSKLTLDHVIPRSRWEHVPKKERPK
EECCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCCHHHHCCCCCCCCC
EFNSWENLVAACKNCNTRKGNKLLTELKWNLPEENRVTPKLRFPLFSITDQQAEKFGWRE
CCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCEEECCEEECCHHHHHHCCHHH
YISF
HHCC
>Mature Secondary Structure
MDILAQPVLVLNAGYVPIGIRSVKDALILIILEKAQLIKDDKSLFIRSEKLRFTAPRIIL
CCCCCCCEEEEECCCCEECHHHHHHHHEEEEEHHHHHHHCCHHHEEECCCEEECCCEEEE
LRDYYKVPPRKDKVSRENIFQRDNYHCVYCGKKFPSSKLTLDHVIPRSRWEHVPKKERPK
EECCCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCHHHHCCCHHHHCCCCCCCCC
EFNSWENLVAACKNCNTRKGNKLLTELKWNLPEENRVTPKLRFPLFSITDQQAEKFGWRE
CCCHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCEEECCEEECCHHHHHHCCHHH
YISF
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA