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The map label for this gene is 45657530

Identifier: 45657530

GI number: 45657530

Start: 2024107

End: 2024604

Strand: Reverse

Name: 45657530

Synonym: LIC11660

Alternate gene names: NA

Gene position: 2024604-2024107 (Counterclockwise)

Preceding gene: 45657531

Following gene: 45657526

Centisome position: 47.33

GC content: 38.55

Gene sequence:

>498_bases
TTGAAACGACTTTATTTTCTACTTATATTTCTGATGTTTTTTCTTTTTATCGGATGTCCTCATTATTCTACCACACGTCT
GATCTCCACTCCTCCTACTTTGATCAGTATTGTTCCTATTGCAACTGGATACGAACTCAGATTGAGAGCTGGAAATCCGG
AACTTCTATTTGATGGTTATAAATTATACGTGGGCAATACGGAAAACGATTCTAGATTTCCTGCAGATCTAAATTCAGGC
ATTGAATGTATGAACGGGATTTTAAATATTTTACCAAATCAACCTTTAGAGTATTCGATTGAACTAAGTCAGACCGAAGG
TCCGTTAGCCGCAATCGGAACCGGGGAAAATACAAATCGAATCTGTAAGATGCAAGTCTCTGTTACTTCAGGTCAGTATC
TAACTCTACGTTCCCAGGTTTTGGTAGTCAGCATCACAAACGGAACCGCTACTGGTTTTGTGTTTTCTATGCCTTCTAAT
TCGCTTAGGGTTCCTTAA

Upstream 100 bases:

>100_bases
TACCGGAAGAAAATCGGGTGACACCTAAACTACGATTTCCACTCTTTTCAATAACGGATCAGCAGGCTGAAAAGTTTGGC
TGGAGGGAGTATATTTCTTT

Downstream 100 bases:

>100_bases
ACCAAACTTCTATTTTTTCGAGGGTGTGTTTAGCGTCTGCAATCCAAATACTCTGAGGATACAAAACGATCAATTCCTCA
AATTTAGATTTGGAAATCTC

Product: putative lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MKRLYFLLIFLMFFLFIGCPHYSTTRLISTPPTLISIVPIATGYELRLRAGNPELLFDGYKLYVGNTENDSRFPADLNSG
IECMNGILNILPNQPLEYSIELSQTEGPLAAIGTGENTNRICKMQVSVTSGQYLTLRSQVLVVSITNGTATGFVFSMPSN
SLRVP

Sequences:

>Translated_165_residues
MKRLYFLLIFLMFFLFIGCPHYSTTRLISTPPTLISIVPIATGYELRLRAGNPELLFDGYKLYVGNTENDSRFPADLNSG
IECMNGILNILPNQPLEYSIELSQTEGPLAAIGTGENTNRICKMQVSVTSGQYLTLRSQVLVVSITNGTATGFVFSMPSN
SLRVP
>Mature_165_residues
MKRLYFLLIFLMFFLFIGCPHYSTTRLISTPPTLISIVPIATGYELRLRAGNPELLFDGYKLYVGNTENDSRFPADLNSG
IECMNGILNILPNQPLEYSIELSQTEGPLAAIGTGENTNRICKMQVSVTSGQYLTLRSQVLVVSITNGTATGFVFSMPSN
SLRVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18219; Mature: 18219

Theoretical pI: Translated: 7.18; Mature: 7.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLYFLLIFLMFFLFIGCPHYSTTRLISTPPTLISIVPIATGYELRLRAGNPELLFDGY
CHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCEEEEEECCCCCEEECCE
KLYVGNTENDSRFPADLNSGIECMNGILNILPNQPLEYSIELSQTEGPLAAIGTGENTNR
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCE
ICKMQVSVTSGQYLTLRSQVLVVSITNGTATGFVFSMPSNSLRVP
EEEEEEEECCCCEEEEEEEEEEEEEECCCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MKRLYFLLIFLMFFLFIGCPHYSTTRLISTPPTLISIVPIATGYELRLRAGNPELLFDGY
CHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEEEECCCEEEEEECCCCCEEECCE
KLYVGNTENDSRFPADLNSGIECMNGILNILPNQPLEYSIELSQTEGPLAAIGTGENTNR
EEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEEECCCCCCE
ICKMQVSVTSGQYLTLRSQVLVVSITNGTATGFVFSMPSNSLRVP
EEEEEEEECCCCEEEEEEEEEEEEEECCCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA