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The map label for this gene is 45656779

Identifier: 45656779

GI number: 45656779

Start: 1072657

End: 1073286

Strand: Reverse

Name: 45656779

Synonym: LIC10888

Alternate gene names: NA

Gene position: 1073286-1072657 (Counterclockwise)

Preceding gene: 45656780

Following gene: 45656778

Centisome position: 25.09

GC content: 34.44

Gene sequence:

>630_bases
ATGAAAAGTCAAGAAATCAAATACGTAGGAATCGACTGTGGAAAAAAAACTTTAGAAGTCATACGGATCGGAGACAACTC
TCTTCATCAAAGACAACAATTTTCAACAACAGAAATTGGAATTTCTAAATTGATAAATTGGCTCAATCCAAATGATGTAG
TAGGCTTAGAAGCAGGCTCTCAATCTTTTAGAATTGCAAAATCAATATTAAACAAAGGGATTCAAGTGATCGTCTTGAAT
CCAGGAGACTTAGCAACAATCTATCAATCTTTAAAAAAAACAGATAAAGAAGACTCTCTCAAGATTGCGAGACTCATACA
ACGTTTTCCAATAGAAGAATTACCGGTCGTTCCGATTCCAAACGATGAAGAGGAGGACAATAGAAGACTATGCACGGAAC
AAGAGAACTGGACAAGGCAACTAACGCAAAGTAAGAATCGACTTCATAGTTTATTTACTCAAGCCGGTTTGACACATATC
ACTAAAAAGCATTTAAGAACAAAAGCAAATAGAGAAATCTCTGTAGCCTTACTTCCAAGTCGATACAAAAAGAAGCGGAA
AGATATTAAAAGTTTTAGATTTAGTGGAACAAATTTTAAACCTCATAGAGAAGAAATTAAAGAAGCCTAA

Upstream 100 bases:

>100_bases
GTGGCAACTTCACAAAGTTGACCACGAATAGGAGTGCTGGTATATCACAACTCGGGCTTGTTAAGACCTTCCGCTCCACT
TAAAACTTTAGGAGAAAGAA

Downstream 100 bases:

>100_bases
AAGAAAAATAAGGCTTATGCTCAAACGATTATGTCAATGCCTGGGGTCGGGTATGATTACTTCTTTGGCGATCAAAGCAA
ACTCAATATCTCACTCCCTA

Product: transposase, ISlin1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKSQEIKYVGIDCGKKTLEVIRIGDNSLHQRQQFSTTEIGISKLINWLNPNDVVGLEAGSQSFRIAKSILNKGIQVIVLN
PGDLATIYQSLKKTDKEDSLKIARLIQRFPIEELPVVPIPNDEEEDNRRLCTEQENWTRQLTQSKNRLHSLFTQAGLTHI
TKKHLRTKANREISVALLPSRYKKKRKDIKSFRFSGTNFKPHREEIKEA

Sequences:

>Translated_209_residues
MKSQEIKYVGIDCGKKTLEVIRIGDNSLHQRQQFSTTEIGISKLINWLNPNDVVGLEAGSQSFRIAKSILNKGIQVIVLN
PGDLATIYQSLKKTDKEDSLKIARLIQRFPIEELPVVPIPNDEEEDNRRLCTEQENWTRQLTQSKNRLHSLFTQAGLTHI
TKKHLRTKANREISVALLPSRYKKKRKDIKSFRFSGTNFKPHREEIKEA
>Mature_209_residues
MKSQEIKYVGIDCGKKTLEVIRIGDNSLHQRQQFSTTEIGISKLINWLNPNDVVGLEAGSQSFRIAKSILNKGIQVIVLN
PGDLATIYQSLKKTDKEDSLKIARLIQRFPIEELPVVPIPNDEEEDNRRLCTEQENWTRQLTQSKNRLHSLFTQAGLTHI
TKKHLRTKANREISVALLPSRYKKKRKDIKSFRFSGTNFKPHREEIKEA

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24060; Mature: 24060

Theoretical pI: Translated: 10.45; Mature: 10.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSQEIKYVGIDCGKKTLEVIRIGDNSLHQRQQFSTTEIGISKLINWLNPNDVVGLEAGS
CCCCCEEEEECCCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC
QSFRIAKSILNKGIQVIVLNPGDLATIYQSLKKTDKEDSLKIARLIQRFPIEELPVVPIP
HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCC
NDEEEDNRRLCTEQENWTRQLTQSKNRLHSLFTQAGLTHITKKHLRTKANREISVALLPS
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCH
RYKKKRKDIKSFRFSGTNFKPHREEIKEA
HHHHHHHHHHHHHCCCCCCCCCHHHHCCC
>Mature Secondary Structure
MKSQEIKYVGIDCGKKTLEVIRIGDNSLHQRQQFSTTEIGISKLINWLNPNDVVGLEAGS
CCCCCEEEEECCCCHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC
QSFRIAKSILNKGIQVIVLNPGDLATIYQSLKKTDKEDSLKIARLIQRFPIEELPVVPIP
HHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCCCCC
NDEEEDNRRLCTEQENWTRQLTQSKNRLHSLFTQAGLTHITKKHLRTKANREISVALLPS
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCH
RYKKKRKDIKSFRFSGTNFKPHREEIKEA
HHHHHHHHHHHHHCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA