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The map label for this gene is tonB

Identifier: 45656780

GI number: 45656780

Start: 1073955

End: 1074545

Strand: Reverse

Name: tonB

Synonym: LIC10889

Alternate gene names: NA

Gene position: 1074545-1073955 (Counterclockwise)

Preceding gene: 45656781

Following gene: 45656779

Centisome position: 25.12

GC content: 38.92

Gene sequence:

>591_bases
ATGGAACAACCTAACTCTACAATTACCATCGTGAAAAAGAACAGGCTCAGAAGATGGATTGATCGTTATCGGATGGAATT
TTTTCTTTCCGTGTCTTTTCTTCTACAAATATTCATTCTGTTTTTTTGGTACACACCTTCTATACAATTCGATCGATTGG
ATCGACTTGTAGATGAAGTTGCATTTGTAGATAATTTAGTCATCCAAGAACCAAACGTTGGAGAAGCAGCAGACGACGGA
GAATTTGAAGTAACCGATACGATTAAAAAAAAGGAAGATCCTAGAATAGCAGGCGCACAAGACGCAATCATTTCCGGTGC
AACCGCTCCAGTGGATCTAACCCCTAATATCACTCCAGACTATCCCGATGAAGCCAGATCTGCAGGTATCACTGGTACTT
CCACATTAGAAGTAATCATTGCAGAAAACGGACAAGTGCTAAGAGTTCGTTCTGTAGGCAAATCTCTTGGGTTCGGTTTA
GACGAAGCAGCAATCGAAGCATTTTATAAAAAAAGATACTCACCTTCTATATTAGAAGGCAAACCGATTACAGTTAAAGT
ATTAATTCCAGTTCGATTTAGTCTTTACTAA

Upstream 100 bases:

>100_bases
TTATGCAGAACTAGACAATACATTCGAACTTTTGAAAGAAGCAGGAGCATTGAAAATATCCCTCGTTACAAAAACCACTC
AAGGTGGAGGTCTTTGATCG

Downstream 100 bases:

>100_bases
AATATATAAGTTAGAATATTATAAAAATAGTATGTATAACAAATAAAAATTTTTTTTGTCATCAGTTTAGATAGAAGTAA
AAATAGTCAACCAACCTTTT

Product: TonB

Products: NA

Alternate protein names: NB-Related Protein

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MEQPNSTITIVKKNRLRRWIDRYRMEFFLSVSFLLQIFILFFWYTPSIQFDRLDRLVDEVAFVDNLVIQEPNVGEAADDG
EFEVTDTIKKKEDPRIAGAQDAIISGATAPVDLTPNITPDYPDEARSAGITGTSTLEVIIAENGQVLRVRSVGKSLGFGL
DEAAIEAFYKKRYSPSILEGKPITVKVLIPVRFSLY

Sequences:

>Translated_196_residues
MEQPNSTITIVKKNRLRRWIDRYRMEFFLSVSFLLQIFILFFWYTPSIQFDRLDRLVDEVAFVDNLVIQEPNVGEAADDG
EFEVTDTIKKKEDPRIAGAQDAIISGATAPVDLTPNITPDYPDEARSAGITGTSTLEVIIAENGQVLRVRSVGKSLGFGL
DEAAIEAFYKKRYSPSILEGKPITVKVLIPVRFSLY
>Mature_196_residues
MEQPNSTITIVKKNRLRRWIDRYRMEFFLSVSFLLQIFILFFWYTPSIQFDRLDRLVDEVAFVDNLVIQEPNVGEAADDG
EFEVTDTIKKKEDPRIAGAQDAIISGATAPVDLTPNITPDYPDEARSAGITGTSTLEVIIAENGQVLRVRSVGKSLGFGL
DEAAIEAFYKKRYSPSILEGKPITVKVLIPVRFSLY

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22079; Mature: 22079

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQPNSTITIVKKNRLRRWIDRYRMEFFLSVSFLLQIFILFFWYTPSIQFDRLDRLVDEV
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AFVDNLVIQEPNVGEAADDGEFEVTDTIKKKEDPRIAGAQDAIISGATAPVDLTPNITPD
HHHHHHEEECCCCCCCCCCCCEEEHHHHHCCCCCCCCCCCHHHHCCCCCCEEECCCCCCC
YPDEARSAGITGTSTLEVIIAENGQVLRVRSVGKSLGFGLDEAAIEAFYKKRYSPSILEG
CCCHHHHCCCCCCCEEEEEEECCCCEEEEEHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC
KPITVKVLIPVRFSLY
CCEEEEEEEEEEEECC
>Mature Secondary Structure
MEQPNSTITIVKKNRLRRWIDRYRMEFFLSVSFLLQIFILFFWYTPSIQFDRLDRLVDEV
CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
AFVDNLVIQEPNVGEAADDGEFEVTDTIKKKEDPRIAGAQDAIISGATAPVDLTPNITPD
HHHHHHEEECCCCCCCCCCCCEEEHHHHHCCCCCCCCCCCHHHHCCCCCCEEECCCCCCC
YPDEARSAGITGTSTLEVIIAENGQVLRVRSVGKSLGFGLDEAAIEAFYKKRYSPSILEG
CCCHHHHCCCCCCCEEEEEEECCCCEEEEEHHHHHHCCCCCHHHHHHHHHHCCCCCCCCC
KPITVKVLIPVRFSLY
CCEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA