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The map label for this gene is 45656778

Identifier: 45656778

GI number: 45656778

Start: 1072177

End: 1072626

Strand: Reverse

Name: 45656778

Synonym: LIC10887

Alternate gene names: NA

Gene position: 1072626-1072177 (Counterclockwise)

Preceding gene: 45656779

Following gene: 45656763

Centisome position: 25.08

GC content: 38.22

Gene sequence:

>450_bases
ATGTCAATGCCTGGGGTCGGGTATGATTACTTCTTTGGCGATCAAAGCAAACTCAATATCTCACTCCCTATGGGTCGTTC
GATAAGTTATATGGGTAATTGTAAACGATTCTCTTCAGCTAAACAAGCCGCTTACTACGTTGGTCTTGTGCCCAGGGTTG
ATATTTCAGGTGACTCCGCTTATTACGGCAGAATTGTAAATCGTGGTTGTCATTCAATTCGAAGAGTGATCGTTCAGGCG
GCTTGGAGTCTTGTCCGTTGTCAATATGGTGGTAAGATAAAAGAATTTTATCAAAGATTATATCCTAAAAAAGGTGCTAA
AAAATCAATCATAGCCACTTCTCGCAAAATGATCGAAATCCTTTACACAATGATTAAAACGGGAGAACTTTTCGATTCTA
TGCCTGAAAAAGTATTGAATCGAAAATTAACTCAATATGGTCTTATGTAA

Upstream 100 bases:

>100_bases
AGATATTAAAAGTTTTAGATTTAGTGGAACAAATTTTAAACCTCATAGAGAAGAAATTAAAGAAGCCTAAAAGAAAAATA
AGGCTTATGCTCAAACGATT

Downstream 100 bases:

>100_bases
TAAAATTGCGGAAGGGATTGACACAAGAAACATAGGAGAGAGCACCCACAAGTTGAATAGGATTTTAGAATCAGAAGAAT
TAAAAACGCACATTTTTCAA

Product: transposase, ISlin1

Products: NA

Alternate protein names: ISlin1 Transposase

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSMPGVGYDYFFGDQSKLNISLPMGRSISYMGNCKRFSSAKQAAYYVGLVPRVDISGDSAYYGRIVNRGCHSIRRVIVQA
AWSLVRCQYGGKIKEFYQRLYPKKGAKKSIIATSRKMIEILYTMIKTGELFDSMPEKVLNRKLTQYGLM

Sequences:

>Translated_149_residues
MSMPGVGYDYFFGDQSKLNISLPMGRSISYMGNCKRFSSAKQAAYYVGLVPRVDISGDSAYYGRIVNRGCHSIRRVIVQA
AWSLVRCQYGGKIKEFYQRLYPKKGAKKSIIATSRKMIEILYTMIKTGELFDSMPEKVLNRKLTQYGLM
>Mature_148_residues
SMPGVGYDYFFGDQSKLNISLPMGRSISYMGNCKRFSSAKQAAYYVGLVPRVDISGDSAYYGRIVNRGCHSIRRVIVQAA
WSLVRCQYGGKIKEFYQRLYPKKGAKKSIIATSRKMIEILYTMIKTGELFDSMPEKVLNRKLTQYGLM

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16954; Mature: 16823

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMPGVGYDYFFGDQSKLNISLPMGRSISYMGNCKRFSSAKQAAYYVGLVPRVDISGDSA
CCCCCCCCEEEECCCCEEEEECCCCCCCHHHHCHHHHHHHHHHHHHEECCCEEECCCCCH
YYGRIVNRGCHSIRRVIVQAAWSLVRCQYGGKIKEFYQRLYPKKGAKKSIIATSRKMIEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LYTMIKTGELFDSMPEKVLNRKLTQYGLM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SMPGVGYDYFFGDQSKLNISLPMGRSISYMGNCKRFSSAKQAAYYVGLVPRVDISGDSA
CCCCCCCEEEECCCCEEEEECCCCCCCHHHHCHHHHHHHHHHHHHEECCCEEECCCCCH
YYGRIVNRGCHSIRRVIVQAAWSLVRCQYGGKIKEFYQRLYPKKGAKKSIIATSRKMIEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
LYTMIKTGELFDSMPEKVLNRKLTQYGLM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA