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The map label for this gene is ribF

Identifier: 45656624

GI number: 45656624

Start: 887819

End: 888775

Strand: Reverse

Name: ribF

Synonym: LIC10728

Alternate gene names: 45656624

Gene position: 888775-887819 (Counterclockwise)

Preceding gene: 45656626

Following gene: 45656620

Centisome position: 20.78

GC content: 35.63

Gene sequence:

>957_bases
TTGATCACATTCCATACAATTGAACAGGCCGGAAAAACAATTCATTCCCCTTGCGTAGTGACCTTAGGAAATTTTGATGG
AATCCATCTGGGACATCAAGCGCTTTTGGATCAGGTTTTAAAAGTTTCCCAAACAACCGGACTCTCTTCCTGTGTAGTCA
CCTATGATCCAAATCCAGCGATCGTACTCGGAAAAAAAGCTGGAATGAAAATTTTGATGTCCCTTGAAGACAAAGAAGAA
TGGATTCGTCAAAAAGGAATTGATTTTTTAGTCGTTCTTCCATTTAACACCGAATTAGCGGAAATGAATGCGGAATTGTT
TTTAGAGGAAATTTTACTTAAACAATTAAAAGCTAAAAATATTATCATTGGCTTCAACCATTGTTTTGGCAAACAGAGGA
GAGGTAATTACGAACTTTTAAAAGAATATTCAGAAAAACTAAAGTATTCAGTAAAAAAAGTAGATCCGGTATACTTAAAT
GATACTAAACTTTCTAGTTCGTATGTAAGAAGATTGATAACGGAAGGTAACGTAAAAGAAGCCTTTCATTGTTTGAATCG
TAGTTACTCTATATCCGGAATTGTAGTGGGAGGGCACAAGCGAGGAAGGGACATCGGGTTTCCAACTGCAAACGTTAAAC
CGAATACGGATATTTTACTTCCAGGCATCGGTGTTTACGCTGGTCTTACTCAGGTAGAAGGAATTGAATATCCTTCTATG
ATCAATATAGGTCGTAATCCTACATTCGGTATAAATTCGTTGACCCTAGAGTCTCATATATTCGACTTTCAAAAAGATAT
ATACGACCAAACTGTGAGAATCTATTTTAAGGAAAAAATCAGAGATGAAATTAAATTTTCAAGCGTTGAAACATTGATTT
CCCAACTCAAACAAGATGAAATCCTCACAAGAAACATTCTAAAATCCACAATTGGAAAAAACTCGGCCCATTTTTAA

Upstream 100 bases:

>100_bases
CGATTGTAAAAACCACGTATTGGTAAAAGTAAAACAGAATAAAACGAGTATTAACCGGTGCCAAACCATCTACTCTAGTA
TCGACAGGATTGGGAAAAAT

Downstream 100 bases:

>100_bases
GTGTAGTTTAAATAAACTAGTAAATATTATAGTTTTAAATTTATCATCGCAGCTTACATTGAGGCGGGTAAAATTTTCAA
ATTCATTTTTTTTGCATGAA

Product: riboflavin biosynthesis protein

Products: NA

Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MITFHTIEQAGKTIHSPCVVTLGNFDGIHLGHQALLDQVLKVSQTTGLSSCVVTYDPNPAIVLGKKAGMKILMSLEDKEE
WIRQKGIDFLVVLPFNTELAEMNAELFLEEILLKQLKAKNIIIGFNHCFGKQRRGNYELLKEYSEKLKYSVKKVDPVYLN
DTKLSSSYVRRLITEGNVKEAFHCLNRSYSISGIVVGGHKRGRDIGFPTANVKPNTDILLPGIGVYAGLTQVEGIEYPSM
INIGRNPTFGINSLTLESHIFDFQKDIYDQTVRIYFKEKIRDEIKFSSVETLISQLKQDEILTRNILKSTIGKNSAHF

Sequences:

>Translated_318_residues
MITFHTIEQAGKTIHSPCVVTLGNFDGIHLGHQALLDQVLKVSQTTGLSSCVVTYDPNPAIVLGKKAGMKILMSLEDKEE
WIRQKGIDFLVVLPFNTELAEMNAELFLEEILLKQLKAKNIIIGFNHCFGKQRRGNYELLKEYSEKLKYSVKKVDPVYLN
DTKLSSSYVRRLITEGNVKEAFHCLNRSYSISGIVVGGHKRGRDIGFPTANVKPNTDILLPGIGVYAGLTQVEGIEYPSM
INIGRNPTFGINSLTLESHIFDFQKDIYDQTVRIYFKEKIRDEIKFSSVETLISQLKQDEILTRNILKSTIGKNSAHF
>Mature_318_residues
MITFHTIEQAGKTIHSPCVVTLGNFDGIHLGHQALLDQVLKVSQTTGLSSCVVTYDPNPAIVLGKKAGMKILMSLEDKEE
WIRQKGIDFLVVLPFNTELAEMNAELFLEEILLKQLKAKNIIIGFNHCFGKQRRGNYELLKEYSEKLKYSVKKVDPVYLN
DTKLSSSYVRRLITEGNVKEAFHCLNRSYSISGIVVGGHKRGRDIGFPTANVKPNTDILLPGIGVYAGLTQVEGIEYPSM
INIGRNPTFGINSLTLESHIFDFQKDIYDQTVRIYFKEKIRDEIKFSSVETLISQLKQDEILTRNILKSTIGKNSAHF

Specific function: Unknown

COG id: COG0196

COG function: function code H; FAD synthase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribF family [H]

Homologues:

Organism=Escherichia coli, GI1786208, Length=309, Percent_Identity=31.0679611650485, Blast_Score=168, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015864
- InterPro:   IPR015865
- InterPro:   IPR002606
- InterPro:   IPR014729 [H]

Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]

EC number: =2.7.1.26; =2.7.7.2 [H]

Molecular weight: Translated: 35841; Mature: 35841

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITFHTIEQAGKTIHSPCVVTLGNFDGIHLGHQALLDQVLKVSQTTGLSSCVVTYDPNPA
CEEEEEHHHCCCHHCCCEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
IVLGKKAGMKILMSLEDKEEWIRQKGIDFLVVLPFNTELAEMNAELFLEEILLKQLKAKN
EEEECCCCEEEEEECCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC
IIIGFNHCFGKQRRGNYELLKEYSEKLKYSVKKVDPVYLNDTKLSSSYVRRLITEGNVKE
EEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCHHH
AFHCLNRSYSISGIVVGGHKRGRDIGFPTANVKPNTDILLPGIGVYAGLTQVEGIEYPSM
HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHCHHHHCCCCCCCE
INIGRNPTFGINSLTLESHIFDFQKDIYDQTVRIYFKEKIRDEIKFSSVETLISQLKQDE
EECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTRNILKSTIGKNSAHF
HHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MITFHTIEQAGKTIHSPCVVTLGNFDGIHLGHQALLDQVLKVSQTTGLSSCVVTYDPNPA
CEEEEEHHHCCCHHCCCEEEEECCCCCEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCC
IVLGKKAGMKILMSLEDKEEWIRQKGIDFLVVLPFNTELAEMNAELFLEEILLKQLKAKN
EEEECCCCEEEEEECCCHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCC
IIIGFNHCFGKQRRGNYELLKEYSEKLKYSVKKVDPVYLNDTKLSSSYVRRLITEGNVKE
EEEEEHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHCCCCHHH
AFHCLNRSYSISGIVVGGHKRGRDIGFPTANVKPNTDILLPGIGVYAGLTQVEGIEYPSM
HHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCHHHHCHHHHCCCCCCCE
INIGRNPTFGINSLTLESHIFDFQKDIYDQTVRIYFKEKIRDEIKFSSVETLISQLKQDE
EECCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILTRNILKSTIGKNSAHF
HHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10993077 [H]