| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
Click here to switch to the map view.
The map label for this gene is 45656312
Identifier: 45656312
GI number: 45656312
Start: 469667
End: 469864
Strand: Direct
Name: 45656312
Synonym: LIC10412
Alternate gene names: NA
Gene position: 469667-469864 (Clockwise)
Preceding gene: 45656309
Following gene: 45656313
Centisome position: 10.98
GC content: 32.32
Gene sequence:
>198_bases ATGTCAAATCACTGTAAAAAGAAATTATCATCTTCAAAGATTCCAAAAGTGATTTTTTACAAACCTTTGGGAAGGATTTT AGTGATCGGTAAGGTGTTGTATTATTTTACAGCACCGGTAGAATGGTATTCAGTTTTGACTTCCGGAATAAAGACACATT CTAAAAAAGGGTCTGGCAAATTTTGGAACAAACTTTAA
Upstream 100 bases:
>100_bases TTTTATAAGAATCAGTAAAATTTTAAGTTCAATCAAGCAGAGTGTTGTGATCAAAATTTACGGTACTGAATTTTATCAAA ATCAGTAGTATAGTAATAGA
Downstream 100 bases:
>100_bases ATTTCTAACGAACTTTATGTCTGCAAGTCCTTTTCAATTTCATTCCTTCAAATCTTTTTTTCAAAAATGGAAGAAGGAAT TTTTTCCATTAAGAATTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MSNHCKKKLSSSKIPKVIFYKPLGRILVIGKVLYYFTAPVEWYSVLTSGIKTHSKKGSGKFWNKL
Sequences:
>Translated_65_residues MSNHCKKKLSSSKIPKVIFYKPLGRILVIGKVLYYFTAPVEWYSVLTSGIKTHSKKGSGKFWNKL >Mature_64_residues SNHCKKKLSSSKIPKVIFYKPLGRILVIGKVLYYFTAPVEWYSVLTSGIKTHSKKGSGKFWNKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7433; Mature: 7302
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNHCKKKLSSSKIPKVIFYKPLGRILVIGKVLYYFTAPVEWYSVLTSGIKTHSKKGSGK CCCHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC FWNKL CCCCC >Mature Secondary Structure SNHCKKKLSSSKIPKVIFYKPLGRILVIGKVLYYFTAPVEWYSVLTSGIKTHSKKGSGK CCHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCC FWNKL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA