| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is yjgQ [C]
Identifier: 45656313
GI number: 45656313
Start: 469881
End: 471041
Strand: Direct
Name: yjgQ [C]
Synonym: LIC10413
Alternate gene names: 45656313
Gene position: 469881-471041 (Clockwise)
Preceding gene: 45656312
Following gene: 45656314
Centisome position: 10.99
GC content: 35.4
Gene sequence:
>1161_bases ATGTCTGCAAGTCCTTTTCAATTTCATTCCTTCAAATCTTTTTTTCAAAAATGGAAGAAGGAATTTTTTCCATTAAGAAT TTTAGATAAGTACTTATTTGGAGAATTTTTTAAAATCTTTATTGGAACCGTGATTCTACTAACAGGGATTATGCTACTTT CTCTTGTAAATGATAACCTAAGAAATTTTACTGCAACAAAGGCGCCTAGATACCACGTGGCGCTTTTTTTAGTTTATAGT ATTCCGAAGATCATATCTACTACTGTAGTTTCCATGTCTTTGATGTTTTCAATTTGTTTTACGGTTGGGCAGTTTTCAGT AAACAAGGAACTCGTTTCTATGATGGCTGCGGGGGTATCTTTTTTTAGAATTGTAACTCCTCTCATCCTATTCGGAATTT TAATGTGGATTATAATGTTGCTCGCGACTGAGTTAATCGTAAGGCCGGTCAACAAATTAGCAAAAATAGAACACGATACA CTTACAGAGGGAATGGGAACTCTTGCGAATAGTGTGTATCAATTTCACGTGAAAGGAAAAGAAGGGTTTTATTATTTATA TTTTTATGATCCGGATAAGGACGAGATCAATGGGGGATTCAATTATATAAGACTTAGACCGGATGGATCTCCAGAAACGG TAATCTCTTCTTTGAAGGCGAAATACAATTACGAAACTAAACTTTGGAAGATGAAGAAAGTAGAAGAGTGGCATTTTGAC AACGATTTGAAACTCAGTTCTCAAGAAACTTACGAAGAAAAAGAATACGAACTTCCCGAAGAACCTTCTTACTTTAAAGT TCCTGCAGGTTCCGTGGAAGAGATGAATCTCTTTCAGTTAAAAGAAGAAGAAAAAAGAAGAATTCAAAAAGGTCTTGCTT ACGGAGACGTTCTTACAGAAAAACATTCCGTTTTTGCTTTACCTATGATGACGATCATAGTTACTTTGATTGGAACGATT GCGGGGTATTTTACAAAAAAAACCGCCGGAGTCGCTTCTTTAGGAATAACCATCGGAGTCGTACTCATCTATTATATATT TAACTCTGCAGGAAAATCTCTAGGTGAAAACGGAGTAATACCTCCTTTTGCAGGAGTTTGGATTACTCCAAGTTTATTCT TAGGTTTGTGTTTTTGGATGTTTCGTCGGATGAATTTATAA
Upstream 100 bases:
>100_bases CCGGTAGAATGGTATTCAGTTTTGACTTCCGGAATAAAGACACATTCTAAAAAAGGGTCTGGCAAATTTTGGAACAAACT TTAAATTTCTAACGAACTTT
Downstream 100 bases:
>100_bases AATTTTCATTCATTATATAAATTAAATATTCAAATGATTAAAAGTATCTGCACTTTATTGAAGAATTTCTTTTGTTGTCC CTATAAAATACAGTCTCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Permease; Permease YjgP/YjgQ Family; Permease Family Protein; Permease YjgP/YjgQ
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSASPFQFHSFKSFFQKWKKEFFPLRILDKYLFGEFFKIFIGTVILLTGIMLLSLVNDNLRNFTATKAPRYHVALFLVYS IPKIISTTVVSMSLMFSICFTVGQFSVNKELVSMMAAGVSFFRIVTPLILFGILMWIIMLLATELIVRPVNKLAKIEHDT LTEGMGTLANSVYQFHVKGKEGFYYLYFYDPDKDEINGGFNYIRLRPDGSPETVISSLKAKYNYETKLWKMKKVEEWHFD NDLKLSSQETYEEKEYELPEEPSYFKVPAGSVEEMNLFQLKEEEKRRIQKGLAYGDVLTEKHSVFALPMMTIIVTLIGTI AGYFTKKTAGVASLGITIGVVLIYYIFNSAGKSLGENGVIPPFAGVWITPSLFLGLCFWMFRRMNL
Sequences:
>Translated_386_residues MSASPFQFHSFKSFFQKWKKEFFPLRILDKYLFGEFFKIFIGTVILLTGIMLLSLVNDNLRNFTATKAPRYHVALFLVYS IPKIISTTVVSMSLMFSICFTVGQFSVNKELVSMMAAGVSFFRIVTPLILFGILMWIIMLLATELIVRPVNKLAKIEHDT LTEGMGTLANSVYQFHVKGKEGFYYLYFYDPDKDEINGGFNYIRLRPDGSPETVISSLKAKYNYETKLWKMKKVEEWHFD NDLKLSSQETYEEKEYELPEEPSYFKVPAGSVEEMNLFQLKEEEKRRIQKGLAYGDVLTEKHSVFALPMMTIIVTLIGTI AGYFTKKTAGVASLGITIGVVLIYYIFNSAGKSLGENGVIPPFAGVWITPSLFLGLCFWMFRRMNL >Mature_385_residues SASPFQFHSFKSFFQKWKKEFFPLRILDKYLFGEFFKIFIGTVILLTGIMLLSLVNDNLRNFTATKAPRYHVALFLVYSI PKIISTTVVSMSLMFSICFTVGQFSVNKELVSMMAAGVSFFRIVTPLILFGILMWIIMLLATELIVRPVNKLAKIEHDTL TEGMGTLANSVYQFHVKGKEGFYYLYFYDPDKDEINGGFNYIRLRPDGSPETVISSLKAKYNYETKLWKMKKVEEWHFDN DLKLSSQETYEEKEYELPEEPSYFKVPAGSVEEMNLFQLKEEEKRRIQKGLAYGDVLTEKHSVFALPMMTIIVTLIGTIA GYFTKKTAGVASLGITIGVVLIYYIFNSAGKSLGENGVIPPFAGVWITPSLFLGLCFWMFRRMNL
Specific function: Unknown
COG id: COG0795
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44223; Mature: 44091
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASPFQFHSFKSFFQKWKKEFFPLRILDKYLFGEFFKIFIGTVILLTGIMLLSLVNDNL CCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNFTATKAPRYHVALFLVYSIPKIISTTVVSMSLMFSICFTVGQFSVNKELVSMMAAGVS HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFRIVTPLILFGILMWIIMLLATELIVRPVNKLAKIEHDTLTEGMGTLANSVYQFHVKGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECC EGFYYLYFYDPDKDEINGGFNYIRLRPDGSPETVISSLKAKYNYETKLWKMKKVEEWHFD CCEEEEEEECCCHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC NDLKLSSQETYEEKEYELPEEPSYFKVPAGSVEEMNLFQLKEEEKRRIQKGLAYGDVLTE CCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHC KHSVFALPMMTIIVTLIGTIAGYFTKKTAGVASLGITIGVVLIYYIFNSAGKSLGENGVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PPFAGVWITPSLFLGLCFWMFRRMNL CCCCCHHHCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SASPFQFHSFKSFFQKWKKEFFPLRILDKYLFGEFFKIFIGTVILLTGIMLLSLVNDNL CCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RNFTATKAPRYHVALFLVYSIPKIISTTVVSMSLMFSICFTVGQFSVNKELVSMMAAGVS HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFRIVTPLILFGILMWIIMLLATELIVRPVNKLAKIEHDTLTEGMGTLANSVYQFHVKGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHEEEEEECC EGFYYLYFYDPDKDEINGGFNYIRLRPDGSPETVISSLKAKYNYETKLWKMKKVEEWHFD CCEEEEEEECCCHHHCCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC NDLKLSSQETYEEKEYELPEEPSYFKVPAGSVEEMNLFQLKEEEKRRIQKGLAYGDVLTE CCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHC KHSVFALPMMTIIVTLIGTIAGYFTKKTAGVASLGITIGVVLIYYIFNSAGKSLGENGVI CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC PPFAGVWITPSLFLGLCFWMFRRMNL CCCCCHHHCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA