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The map label for this gene is slp [H]

Identifier: 45357946

GI number: 45357946

Start: 381781

End: 383508

Strand: Direct

Name: slp [H]

Synonym: MMP0383

Alternate gene names: 45357946

Gene position: 381781-383508 (Clockwise)

Preceding gene: 45357945

Following gene: 45357950

Centisome position: 22.98

GC content: 40.34

Gene sequence:

>1728_bases
ATGGCTATGAGCATGAAAAAAATAGGTGCTATTGCTGTAGGCGGTGCAATGGTTGCATCCGCTTTAGCAACAGGCGCTTT
CGCTGCTGAAAAAGTTGGAGATGTAGATGCTTTCGCTGCTGACGTAGTTGCAGATGGAAACGCAAACGTTGATATTGTAG
TAGGTTCAAACGCTGCTGCTTTAGACGTTGTTTCAGCTGCTAACGTTGCTGCAAAAATCGGATCATTAATGTTCAAAGAA
GGAACAGTTGAAGACGGAAGTGCACAAATCACTGTAAGTGCAAGTGCAGAATCCGATGAAATTAAAGATTTATGGGCAAC
TGCTCCTGCAGCTATTGCTGGTCAGGACAAAGCACTTGTAATCACTGCACCAGATGATGATTATACAGCTGTTGCAACAG
GTATTTTAGGATTTGCAGATGGTGTACCTGCAGGAACTGGTTTAAACTTATTTGGAATAACAACCGCAGATGCTGCAGTT
GATTTAGAGGATTTACAAACCTTAATGATTGTAGAAGATGCTGACCCTTCAGGATGGGATTTCTACGGTACCGGAAATGA
TTTCGAAGCAGCAGAAGTACTTGTTGCTGTAGTTAACACTGAAACAACAGTACCTGCTTCAACATTTGGTGTAGGAACTC
CTGATTTAGAAGTTTTAGAAGACGAAGTAGTTTACGCATCATTAGCATTTGTTGAAGATCAATACGGTAACGCTGCAGGT
GATTACGCTGCATTATTCCCAGGTATGAGAATTCCATTACTTGGTCAAGAAATGGTAGTTGTTAAACTCGATACTGATGA
TGATTTAGCTATTGTTGGTACTGAAGCATACGAAGGAGTTATCAAACAAGGTGACTCATACGATGTTGGAAACGGATACA
CTGTAAAAATTGCAAACGTTTTAAAACAATCAGGTACTGCATACAAAGTAGATGTTCAACTCTTAAAAGACGGTAAAGTT
GTAGCTTCAAAATTCGACACCGTTGATAAACCTGCAGCACCTGCAGCTGCAACACAACTTAAATTAGTTTACAAAGATAT
GGGTATCGTTGTAAACGCTGCATGGACCGATGTTGGAGACAACTACGGTTACGCAGAACTTGTAATTGCAGATAATGTAG
TTGAAATGGAACTTGGAGAAGAATTCATTCCTGACTACGAAGCATACACAGTTGATTTAACCGCTGCAGGTCTTACATTA
AGCGACAAAGCTACCGCAGCAGGAACAATTGTAGGTATTGCTTTAAAATACGTTGGAGACGACGTTGACAAAATTTCAAA
AGATAAAACATTCACAATCGCAGACTACGCAAAATTAGATTTCGACGAAGACAGCGGTAAAATTGCTCTTAAATTCCTTA
TGGACGAATCAAAAGATGTAAACATAAACATCGGCGAAAAAGTAAGTGTTTTAAACGCTGAAATTAAATTAGCTGACATT
GAAGCTGAAGCTAAAGAAGCTGTTGTTATGACTGCACCTATTGCAGTATTAGACTCAGAAGCTTCATTAGACGCTGCTGA
CAAAGGATTAATCTTAGTTGGTGGACCAGTTGTAAACGCATTAACAGCTGAACTTGCTGACGCTGGATTAGTTGCAATTG
ACAACGAATCACCTGCAACCTTAGCAGTAGCTGCTGGCGCTGCAAACGGTAACGATGTATTAGTTGTAGCTGGTGGAGAC
AGAGCTGCAACAGAAGAAGCTGCTGAAGCTTTAATCGACATGTTATAA

Upstream 100 bases:

>100_bases
CTGAAACTATTATTGCAACCGTTTCAAATGGTAAGGTATATATAGTGATGGCGACAAGGCTATTCTTGTAAAAAAAGTAA
CACAACAAAGGTGAATTACT

Downstream 100 bases:

>100_bases
TTAAACTTTTAAAAAGTTTAATCAAAACCTGATTAAGTGGGTCTTTTGACCCACTTTTTCTTTTTTAGAAAATAGTATTG
TTATATTTGAATTTATAGTT

Product: S-layer protein

Products: NA

Alternate protein names: Cell surface glycoprotein; Surface layer protein; Fragment [H]

Number of amino acids: Translated: 575; Mature: 574

Protein sequence:

>575_residues
MAMSMKKIGAIAVGGAMVASALATGAFAAEKVGDVDAFAADVVADGNANVDIVVGSNAAALDVVSAANVAAKIGSLMFKE
GTVEDGSAQITVSASAESDEIKDLWATAPAAIAGQDKALVITAPDDDYTAVATGILGFADGVPAGTGLNLFGITTADAAV
DLEDLQTLMIVEDADPSGWDFYGTGNDFEAAEVLVAVVNTETTVPASTFGVGTPDLEVLEDEVVYASLAFVEDQYGNAAG
DYAALFPGMRIPLLGQEMVVVKLDTDDDLAIVGTEAYEGVIKQGDSYDVGNGYTVKIANVLKQSGTAYKVDVQLLKDGKV
VASKFDTVDKPAAPAAATQLKLVYKDMGIVVNAAWTDVGDNYGYAELVIADNVVEMELGEEFIPDYEAYTVDLTAAGLTL
SDKATAAGTIVGIALKYVGDDVDKISKDKTFTIADYAKLDFDEDSGKIALKFLMDESKDVNINIGEKVSVLNAEIKLADI
EAEAKEAVVMTAPIAVLDSEASLDAADKGLILVGGPVVNALTAELADAGLVAIDNESPATLAVAAGAANGNDVLVVAGGD
RAATEEAAEALIDML

Sequences:

>Translated_575_residues
MAMSMKKIGAIAVGGAMVASALATGAFAAEKVGDVDAFAADVVADGNANVDIVVGSNAAALDVVSAANVAAKIGSLMFKE
GTVEDGSAQITVSASAESDEIKDLWATAPAAIAGQDKALVITAPDDDYTAVATGILGFADGVPAGTGLNLFGITTADAAV
DLEDLQTLMIVEDADPSGWDFYGTGNDFEAAEVLVAVVNTETTVPASTFGVGTPDLEVLEDEVVYASLAFVEDQYGNAAG
DYAALFPGMRIPLLGQEMVVVKLDTDDDLAIVGTEAYEGVIKQGDSYDVGNGYTVKIANVLKQSGTAYKVDVQLLKDGKV
VASKFDTVDKPAAPAAATQLKLVYKDMGIVVNAAWTDVGDNYGYAELVIADNVVEMELGEEFIPDYEAYTVDLTAAGLTL
SDKATAAGTIVGIALKYVGDDVDKISKDKTFTIADYAKLDFDEDSGKIALKFLMDESKDVNINIGEKVSVLNAEIKLADI
EAEAKEAVVMTAPIAVLDSEASLDAADKGLILVGGPVVNALTAELADAGLVAIDNESPATLAVAAGAANGNDVLVVAGGD
RAATEEAAEALIDML
>Mature_574_residues
AMSMKKIGAIAVGGAMVASALATGAFAAEKVGDVDAFAADVVADGNANVDIVVGSNAAALDVVSAANVAAKIGSLMFKEG
TVEDGSAQITVSASAESDEIKDLWATAPAAIAGQDKALVITAPDDDYTAVATGILGFADGVPAGTGLNLFGITTADAAVD
LEDLQTLMIVEDADPSGWDFYGTGNDFEAAEVLVAVVNTETTVPASTFGVGTPDLEVLEDEVVYASLAFVEDQYGNAAGD
YAALFPGMRIPLLGQEMVVVKLDTDDDLAIVGTEAYEGVIKQGDSYDVGNGYTVKIANVLKQSGTAYKVDVQLLKDGKVV
ASKFDTVDKPAAPAAATQLKLVYKDMGIVVNAAWTDVGDNYGYAELVIADNVVEMELGEEFIPDYEAYTVDLTAAGLTLS
DKATAAGTIVGIALKYVGDDVDKISKDKTFTIADYAKLDFDEDSGKIALKFLMDESKDVNINIGEKVSVLNAEIKLADIE
AEAKEAVVMTAPIAVLDSEASLDAADKGLILVGGPVVNALTAELADAGLVAIDNESPATLAVAAGAANGNDVLVVAGGDR
AATEEAAEALIDML

Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of the cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Mj S-layer protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022651
- InterPro:   IPR006454
- InterPro:   IPR022650 [H]

Pfam domain/function: PF05124 S_layer_C; PF05123 S_layer_N [H]

EC number: NA

Molecular weight: Translated: 58948; Mature: 58817

Theoretical pI: Translated: 3.69; Mature: 3.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMSMKKIGAIAVGGAMVASALATGAFAAEKVGDVDAFAADVVADGNANVDIVVGSNAAA
CCCCCHHCCEEEECHHHHHHHHHHCCHHHHHCCCHHHHHHHEEECCCCCEEEEECCCCCE
LDVVSAANVAAKIGSLMFKEGTVEDGSAQITVSASAESDEIKDLWATAPAAIAGQDKALV
EEHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCCHHHHHHHHCCCCEECCCCCEEE
ITAPDDDYTAVATGILGFADGVPAGTGLNLFGITTADAAVDLEDLQTLMIVEDADPSGWD
EECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEHHHCEEEEEEECCCCCCCE
FYGTGNDFEAAEVLVAVVNTETTVPASTFGVGTPDLEVLEDEVVYASLAFVEDQYGNAAG
EECCCCCCCHHEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHEEEEEEEEECCCCCCCC
DYAALFPGMRIPLLGQEMVVVKLDTDDDLAIVGTEAYEGVIKQGDSYDVGNGYTVKIANV
CHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEECHHHHHHHHCCCCEECCCCEEEEEEHH
LKQSGTAYKVDVQLLKDGKVVASKFDTVDKPAAPAAATQLKLVYKDMGIVVNAAWTDVGD
HHHCCCEEEEEEEEEECCCEEEHHCCCCCCCCCCCHHHHEEEEEECCCEEEEEEEECCCC
NYGYAELVIADNVVEMELGEEFIPDYEAYTVDLTAAGLTLSDKATAAGTIVGIALKYVGD
CCCEEEEEEECCEEEEECCHHHCCCCCEEEEEEEEECEEECCCCCCCHHHEEEEHHHHCC
DVDKISKDKTFTIADYAKLDFDEDSGKIALKFLMDESKDVNINIGEKVSVLNAEIKLADI
CHHHHCCCCEEEEEEEEEECCCCCCCCEEEEEEECCCCCEEEECCCEEEEEEEEEEEEEE
EAEAKEAVVMTAPIAVLDSEASLDAADKGLILVGGPVVNALTAELADAGLVAIDNESPAT
CCCCCCEEEEEECEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCEEEECCCCCCE
LAVAAGAANGNDVLVVAGGDRAATEEAAEALIDML
EEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
AMSMKKIGAIAVGGAMVASALATGAFAAEKVGDVDAFAADVVADGNANVDIVVGSNAAA
CCCCHHCCEEEECHHHHHHHHHHCCHHHHHCCCHHHHHHHEEECCCCCEEEEECCCCCE
LDVVSAANVAAKIGSLMFKEGTVEDGSAQITVSASAESDEIKDLWATAPAAIAGQDKALV
EEHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCCHHHHHHHHCCCCEECCCCCEEE
ITAPDDDYTAVATGILGFADGVPAGTGLNLFGITTADAAVDLEDLQTLMIVEDADPSGWD
EECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEHHHCEEEEEEECCCCCCCE
FYGTGNDFEAAEVLVAVVNTETTVPASTFGVGTPDLEVLEDEVVYASLAFVEDQYGNAAG
EECCCCCCCHHEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHEEEEEEEEECCCCCCCC
DYAALFPGMRIPLLGQEMVVVKLDTDDDLAIVGTEAYEGVIKQGDSYDVGNGYTVKIANV
CHHHHCCCCCCCCCCCEEEEEEECCCCCEEEEECHHHHHHHHCCCCEECCCCEEEEEEHH
LKQSGTAYKVDVQLLKDGKVVASKFDTVDKPAAPAAATQLKLVYKDMGIVVNAAWTDVGD
HHHCCCEEEEEEEEEECCCEEEHHCCCCCCCCCCCHHHHEEEEEECCCEEEEEEEECCCC
NYGYAELVIADNVVEMELGEEFIPDYEAYTVDLTAAGLTLSDKATAAGTIVGIALKYVGD
CCCEEEEEEECCEEEEECCHHHCCCCCEEEEEEEEECEEECCCCCCCHHHEEEEHHHHCC
DVDKISKDKTFTIADYAKLDFDEDSGKIALKFLMDESKDVNINIGEKVSVLNAEIKLADI
CHHHHCCCCEEEEEEEEEECCCCCCCCEEEEEEECCCCCEEEECCCEEEEEEEEEEEEEE
EAEAKEAVVMTAPIAVLDSEASLDAADKGLILVGGPVVNALTAELADAGLVAIDNESPAT
CCCCCCEEEEEECEEEECCCCCCCCCCCCEEEECCHHHHHHHHHHCCCCEEEECCCCCCE
LAVAAGAANGNDVLVVAGGDRAATEEAAEALIDML
EEEEECCCCCCEEEEEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1825827; 8132478 [H]