Definition Methanococcus maripaludis S2 chromosome, complete genome.
Accession NC_005791
Length 1,661,137

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The map label for this gene is yheS [C]

Identifier: 45357945

GI number: 45357945

Start: 379591

End: 381363

Strand: Direct

Name: yheS [C]

Synonym: MMP0382

Alternate gene names: 45357945

Gene position: 379591-381363 (Clockwise)

Preceding gene: 45357944

Following gene: 45357946

Centisome position: 22.85

GC content: 36.83

Gene sequence:

>1773_bases
ATGTCGCGACTGGCGATTTTAGATTATGATAGATGTCAACCAAGACGATGTTCGATGGAATGCATGAAGTACTGTCCTGG
AGTCAGGATGGAAGAAGAAACAATAGTAATGGATGAAAATTTGGGAAAACCAATAATTTCCGAGGAACTCTGCAGCGGAT
GCGGTATCTGTACAAAAAGATGTCCATTTGGGGCGATAAGAATTATTGGGCTTCCTGAAGAGTTAACTGATGACAGGATT
GTTCATTCATACGGTCAAAACCGGTTTAGATTGTATGGATTAATTACTCCAAGAGATGGGGTAACTGGGCTTTTGGGTCC
AAACGGTGTTGGAAAATCAACAATAATTAAAGCATTAAGTGGGGAAATGGTCTTAAATTTAAACGATTTAACAGAAACTC
CCGACATGAAAAAAGTATTGGATTATTTTTCAGGAACCGAACTTCAAAATTACTTTGAAAAATTGAAAAACAACGGAATA
AAACCAATTCACAAACCCCAGTATGTTGATGTTTTACCAAAAGTTGTAAAAGGAAAAGTTGGAGAACTTCTCAAAAAAGT
GGATGAAAAAGGAGAATTTGAAAAAATAATAAATGCTCTTGAAATTTCAAATATTTTGGATAGAACTTTTGACCAGCTTT
CAGGCGGAGAGCTTCAAAGAGTTGCAATTGCAGCAGCATGCCTTAGAGAAGGTGACATTTATTATTTTGATGAGCCTACG
TCATGGTTGGATGTAAAACAGAGATTTAGTGCGGCAAAAGTAATAAGGGAAGTTGCTGAAGGCAAAAAAGTTGTTGCAGT
AGAGCACGATTTGATTGTTTTAGACTACCTTTCAGACTACATTCATATAATGTATGGTATCCCTTCAGCTTACGGGGTTG
TAACCCACCCGAGAGGAACGAGAGTTGGAATAAATACGTATCTTGATGGTTTCTTAAAAGAAGAAAACATAAGATTTAGA
AAAAGCCCGATAGTATTTGAAAAAAGACCTCCACAAGACAGCACAAATAGGCCTTTACTTTTGGATTATACGGATATTTC
AAAGAAGCTCGGGGATTTCAGTTTAAATGTTAATGGCGGTCAAATCTATCAAGGAGAAGTTGTAGGAATTTTAGGGCCAA
ATGGAATTGGAAAGACCACATTTGTAAAAGCACTTGCAGGAGTAATTTCGCCGGATTCTGGAGAAGTTACTGGAGATGTT
AAAGTTTCATATAAACCGCAGTACATTTCATCAGATTTTGAAGGAACGGTTGAAGATTTATTAATGTCAATTACTGCAAT
TCACACATCATACTACAAATCAGAGATAATAAAACCGCTTGCACTTGAAAATATACTTGATTCTTCAGTAAAAGACCTTT
CAGGAGGGGAACTTCAAAGAGTTTCAATTGCAGCATGTTTAAGTCAGGATGCAGATCTTTATTTAATAGATGAGCCTTCT
GCATTTTTGGATGTTGAGCAGAGATTGACTACATCAAGGGTAATTAGAAGAATGGCCGATGAAAAAGAAGCAGCAATGTT
TGTGGTTGACCACGATATATTATTCCAGGATTACATTTCTGATAGATTTATTGTATTCAGCGGTATTGCAGGTTCAAGCG
GAACTGGTTCAGAACCTTTACAAAAACGAGCTGGTGCAAATAAATTTTTAAAAGAAATGGGAATTACATTTAGGAGAGAC
CCTGACACCGGAAGGCCGAGAGTTAACAAGGAAGGAAGCCAAAGAGACGTTTACCAAAAAGAAATTGGGGAATATTATTA
CCTCGATGAATAA

Upstream 100 bases:

>100_bases
CGCAAAGAAACAAAAAAATTAAAATTTAAACGATTTAACAAATTTGATACAAATTAATTAGATAGTAATCAGATAGTAAA
TTTATATTTTGGTGATTTTA

Downstream 100 bases:

>100_bases
ATGACTTACTTTTATTTAATAAAATTTTTTTACAGATTACATACGATTTACTTTAATGCGAAGTGAATTATGTCAATAGT
ACAATATATTCCCAAATATT

Product: putative ATPase RIL

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 590; Mature: 589

Protein sequence:

>590_residues
MSRLAILDYDRCQPRRCSMECMKYCPGVRMEEETIVMDENLGKPIISEELCSGCGICTKRCPFGAIRIIGLPEELTDDRI
VHSYGQNRFRLYGLITPRDGVTGLLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLKNNGI
KPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPT
SWLDVKQRFSAAKVIREVAEGKKVVAVEHDLIVLDYLSDYIHIMYGIPSAYGVVTHPRGTRVGINTYLDGFLKEENIRFR
KSPIVFEKRPPQDSTNRPLLLDYTDISKKLGDFSLNVNGGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVTGDV
KVSYKPQYISSDFEGTVEDLLMSITAIHTSYYKSEIIKPLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPS
AFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRFIVFSGIAGSSGTGSEPLQKRAGANKFLKEMGITFRRD
PDTGRPRVNKEGSQRDVYQKEIGEYYYLDE

Sequences:

>Translated_590_residues
MSRLAILDYDRCQPRRCSMECMKYCPGVRMEEETIVMDENLGKPIISEELCSGCGICTKRCPFGAIRIIGLPEELTDDRI
VHSYGQNRFRLYGLITPRDGVTGLLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLKNNGI
KPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPT
SWLDVKQRFSAAKVIREVAEGKKVVAVEHDLIVLDYLSDYIHIMYGIPSAYGVVTHPRGTRVGINTYLDGFLKEENIRFR
KSPIVFEKRPPQDSTNRPLLLDYTDISKKLGDFSLNVNGGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVTGDV
KVSYKPQYISSDFEGTVEDLLMSITAIHTSYYKSEIIKPLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPS
AFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRFIVFSGIAGSSGTGSEPLQKRAGANKFLKEMGITFRRD
PDTGRPRVNKEGSQRDVYQKEIGEYYYLDE
>Mature_589_residues
SRLAILDYDRCQPRRCSMECMKYCPGVRMEEETIVMDENLGKPIISEELCSGCGICTKRCPFGAIRIIGLPEELTDDRIV
HSYGQNRFRLYGLITPRDGVTGLLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLKNNGIK
PIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTS
WLDVKQRFSAAKVIREVAEGKKVVAVEHDLIVLDYLSDYIHIMYGIPSAYGVVTHPRGTRVGINTYLDGFLKEENIRFRK
SPIVFEKRPPQDSTNRPLLLDYTDISKKLGDFSLNVNGGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVTGDVK
VSYKPQYISSDFEGTVEDLLMSITAIHTSYYKSEIIKPLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSA
FLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRFIVFSGIAGSSGTGSEPLQKRAGANKFLKEMGITFRRDP
DTGRPRVNKEGSQRDVYQKEIGEYYYLDE

Specific function: Unknown

COG id: COG1245

COG function: function code R; Predicted ATPase, RNase L inhibitor (RLI) homolog

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI108773784, Length=598, Percent_Identity=45.819397993311, Blast_Score=550, Evalue=1e-156,
Organism=Homo sapiens, GI108773782, Length=598, Percent_Identity=45.819397993311, Blast_Score=550, Evalue=1e-156,
Organism=Homo sapiens, GI157502201, Length=359, Percent_Identity=25.0696378830084, Blast_Score=68, Evalue=2e-11,
Organism=Homo sapiens, GI157502203, Length=230, Percent_Identity=27.3913043478261, Blast_Score=68, Evalue=3e-11,
Organism=Homo sapiens, GI90421313, Length=155, Percent_Identity=30.3225806451613, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI48994943, Length=495, Percent_Identity=21.4141414141414, Blast_Score=85, Evalue=2e-17,
Organism=Escherichia coli, GI1788165, Length=195, Percent_Identity=27.6923076923077, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1789593, Length=223, Percent_Identity=30.0448430493274, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1787500, Length=206, Percent_Identity=27.1844660194175, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1786803, Length=190, Percent_Identity=30.5263157894737, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786345, Length=218, Percent_Identity=26.605504587156, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1788761, Length=229, Percent_Identity=27.9475982532751, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1787112, Length=239, Percent_Identity=27.6150627615063, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI87081782, Length=216, Percent_Identity=27.3148148148148, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789891, Length=191, Percent_Identity=24.0837696335079, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1790467, Length=197, Percent_Identity=27.4111675126904, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788002, Length=234, Percent_Identity=26.4957264957265, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1787089, Length=189, Percent_Identity=32.8042328042328, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI87081709, Length=203, Percent_Identity=29.5566502463054, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87081791, Length=178, Percent_Identity=28.6516853932584, Blast_Score=64, Evalue=4e-11,
Organism=Escherichia coli, GI1789962, Length=204, Percent_Identity=25, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17555800, Length=595, Percent_Identity=45.8823529411765, Blast_Score=546, Evalue=1e-155,
Organism=Saccharomyces cerevisiae, GI6320296, Length=602, Percent_Identity=46.0132890365449, Blast_Score=539, Evalue=1e-154,
Organism=Drosophila melanogaster, GI24661270, Length=596, Percent_Identity=46.1409395973154, Blast_Score=536, Evalue=1e-152,
Organism=Drosophila melanogaster, GI21355589, Length=596, Percent_Identity=46.1409395973154, Blast_Score=536, Evalue=1e-152,
Organism=Drosophila melanogaster, GI24585091, Length=254, Percent_Identity=25.5905511811024, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR013283
- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR007209 [H]

Pfam domain/function: PF00005 ABC_tran; PF04068 RLI [H]

EC number: NA

Molecular weight: Translated: 65930; Mature: 65799

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLAILDYDRCQPRRCSMECMKYCPGVRMEEETIVMDENLGKPIISEELCSGCGICTKR
CCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHCCCCCCCCC
CPFGAIRIIGLPEELTDDRIVHSYGQNRFRLYGLITPRDGVTGLLGPNGVGKSTIIKALS
CCCCEEEEEECCHHHCCCHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHC
GEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLKNNGIKPIHKPQYVDVLPKVVKGKV
CCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHH
GELLKKVDEKGEFEKIINALEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCC
SWLDVKQRFSAAKVIREVAEGKKVVAVEHDLIVLDYLSDYIHIMYGIPSAYGVVTHPRGT
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEHHHHHHHHHHHHCCCCCCCEEECCCCC
RVGINTYLDGFLKEENIRFRKSPIVFEKRPPQDSTNRPLLLDYTDISKKLGDFSLNVNGG
EEEHHHHHHHHHCCCCCEEECCCEEEECCCCCCCCCCCEEEEHHHHHHHHCCEEEECCCC
QIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVTGDVKVSYKPQYISSDFEGTVEDL
EEEECEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCHHCCCCCHHHHHH
LMSITAIHTSYYKSEIIKPLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCH
AFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRFIVFSGIAGSSGTGSEPL
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCEEEEECCCCCCCCCCCHH
QKRAGANKFLKEMGITFRRDPDTGRPRVNKEGSQRDVYQKEIGEYYYLDE
HHHCCHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEECCC
>Mature Secondary Structure 
SRLAILDYDRCQPRRCSMECMKYCPGVRMEEETIVMDENLGKPIISEELCSGCGICTKR
CCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHCCCCCCCCC
CPFGAIRIIGLPEELTDDRIVHSYGQNRFRLYGLITPRDGVTGLLGPNGVGKSTIIKALS
CCCCEEEEEECCHHHCCCHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHC
GEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLKNNGIKPIHKPQYVDVLPKVVKGKV
CCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHH
GELLKKVDEKGEFEKIINALEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPT
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCC
SWLDVKQRFSAAKVIREVAEGKKVVAVEHDLIVLDYLSDYIHIMYGIPSAYGVVTHPRGT
HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEHHHHHHHHHHHHCCCCCCCEEECCCCC
RVGINTYLDGFLKEENIRFRKSPIVFEKRPPQDSTNRPLLLDYTDISKKLGDFSLNVNGG
EEEHHHHHHHHHCCCCCEEECCCEEEECCCCCCCCCCCEEEEHHHHHHHHCCEEEECCCC
QIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVTGDVKVSYKPQYISSDFEGTVEDL
EEEECEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCHHCCCCCHHHHHH
LMSITAIHTSYYKSEIIKPLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCH
AFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRFIVFSGIAGSSGTGSEPL
HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCEEEEECCCCCCCCCCCHH
QKRAGANKFLKEMGITFRRDPDTGRPRVNKEGSQRDVYQKEIGEYYYLDE
HHHCCHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]