| Definition | Methanococcus maripaludis S2 chromosome, complete genome. |
|---|---|
| Accession | NC_005791 |
| Length | 1,661,137 |
Click here to switch to the map view.
The map label for this gene is yheS [C]
Identifier: 45357945
GI number: 45357945
Start: 379591
End: 381363
Strand: Direct
Name: yheS [C]
Synonym: MMP0382
Alternate gene names: 45357945
Gene position: 379591-381363 (Clockwise)
Preceding gene: 45357944
Following gene: 45357946
Centisome position: 22.85
GC content: 36.83
Gene sequence:
>1773_bases ATGTCGCGACTGGCGATTTTAGATTATGATAGATGTCAACCAAGACGATGTTCGATGGAATGCATGAAGTACTGTCCTGG AGTCAGGATGGAAGAAGAAACAATAGTAATGGATGAAAATTTGGGAAAACCAATAATTTCCGAGGAACTCTGCAGCGGAT GCGGTATCTGTACAAAAAGATGTCCATTTGGGGCGATAAGAATTATTGGGCTTCCTGAAGAGTTAACTGATGACAGGATT GTTCATTCATACGGTCAAAACCGGTTTAGATTGTATGGATTAATTACTCCAAGAGATGGGGTAACTGGGCTTTTGGGTCC AAACGGTGTTGGAAAATCAACAATAATTAAAGCATTAAGTGGGGAAATGGTCTTAAATTTAAACGATTTAACAGAAACTC CCGACATGAAAAAAGTATTGGATTATTTTTCAGGAACCGAACTTCAAAATTACTTTGAAAAATTGAAAAACAACGGAATA AAACCAATTCACAAACCCCAGTATGTTGATGTTTTACCAAAAGTTGTAAAAGGAAAAGTTGGAGAACTTCTCAAAAAAGT GGATGAAAAAGGAGAATTTGAAAAAATAATAAATGCTCTTGAAATTTCAAATATTTTGGATAGAACTTTTGACCAGCTTT CAGGCGGAGAGCTTCAAAGAGTTGCAATTGCAGCAGCATGCCTTAGAGAAGGTGACATTTATTATTTTGATGAGCCTACG TCATGGTTGGATGTAAAACAGAGATTTAGTGCGGCAAAAGTAATAAGGGAAGTTGCTGAAGGCAAAAAAGTTGTTGCAGT AGAGCACGATTTGATTGTTTTAGACTACCTTTCAGACTACATTCATATAATGTATGGTATCCCTTCAGCTTACGGGGTTG TAACCCACCCGAGAGGAACGAGAGTTGGAATAAATACGTATCTTGATGGTTTCTTAAAAGAAGAAAACATAAGATTTAGA AAAAGCCCGATAGTATTTGAAAAAAGACCTCCACAAGACAGCACAAATAGGCCTTTACTTTTGGATTATACGGATATTTC AAAGAAGCTCGGGGATTTCAGTTTAAATGTTAATGGCGGTCAAATCTATCAAGGAGAAGTTGTAGGAATTTTAGGGCCAA ATGGAATTGGAAAGACCACATTTGTAAAAGCACTTGCAGGAGTAATTTCGCCGGATTCTGGAGAAGTTACTGGAGATGTT AAAGTTTCATATAAACCGCAGTACATTTCATCAGATTTTGAAGGAACGGTTGAAGATTTATTAATGTCAATTACTGCAAT TCACACATCATACTACAAATCAGAGATAATAAAACCGCTTGCACTTGAAAATATACTTGATTCTTCAGTAAAAGACCTTT CAGGAGGGGAACTTCAAAGAGTTTCAATTGCAGCATGTTTAAGTCAGGATGCAGATCTTTATTTAATAGATGAGCCTTCT GCATTTTTGGATGTTGAGCAGAGATTGACTACATCAAGGGTAATTAGAAGAATGGCCGATGAAAAAGAAGCAGCAATGTT TGTGGTTGACCACGATATATTATTCCAGGATTACATTTCTGATAGATTTATTGTATTCAGCGGTATTGCAGGTTCAAGCG GAACTGGTTCAGAACCTTTACAAAAACGAGCTGGTGCAAATAAATTTTTAAAAGAAATGGGAATTACATTTAGGAGAGAC CCTGACACCGGAAGGCCGAGAGTTAACAAGGAAGGAAGCCAAAGAGACGTTTACCAAAAAGAAATTGGGGAATATTATTA CCTCGATGAATAA
Upstream 100 bases:
>100_bases CGCAAAGAAACAAAAAAATTAAAATTTAAACGATTTAACAAATTTGATACAAATTAATTAGATAGTAATCAGATAGTAAA TTTATATTTTGGTGATTTTA
Downstream 100 bases:
>100_bases ATGACTTACTTTTATTTAATAAAATTTTTTTACAGATTACATACGATTTACTTTAATGCGAAGTGAATTATGTCAATAGT ACAATATATTCCCAAATATT
Product: putative ATPase RIL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 590; Mature: 589
Protein sequence:
>590_residues MSRLAILDYDRCQPRRCSMECMKYCPGVRMEEETIVMDENLGKPIISEELCSGCGICTKRCPFGAIRIIGLPEELTDDRI VHSYGQNRFRLYGLITPRDGVTGLLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLKNNGI KPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPT SWLDVKQRFSAAKVIREVAEGKKVVAVEHDLIVLDYLSDYIHIMYGIPSAYGVVTHPRGTRVGINTYLDGFLKEENIRFR KSPIVFEKRPPQDSTNRPLLLDYTDISKKLGDFSLNVNGGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVTGDV KVSYKPQYISSDFEGTVEDLLMSITAIHTSYYKSEIIKPLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPS AFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRFIVFSGIAGSSGTGSEPLQKRAGANKFLKEMGITFRRD PDTGRPRVNKEGSQRDVYQKEIGEYYYLDE
Sequences:
>Translated_590_residues MSRLAILDYDRCQPRRCSMECMKYCPGVRMEEETIVMDENLGKPIISEELCSGCGICTKRCPFGAIRIIGLPEELTDDRI VHSYGQNRFRLYGLITPRDGVTGLLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLKNNGI KPIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPT SWLDVKQRFSAAKVIREVAEGKKVVAVEHDLIVLDYLSDYIHIMYGIPSAYGVVTHPRGTRVGINTYLDGFLKEENIRFR KSPIVFEKRPPQDSTNRPLLLDYTDISKKLGDFSLNVNGGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVTGDV KVSYKPQYISSDFEGTVEDLLMSITAIHTSYYKSEIIKPLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPS AFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRFIVFSGIAGSSGTGSEPLQKRAGANKFLKEMGITFRRD PDTGRPRVNKEGSQRDVYQKEIGEYYYLDE >Mature_589_residues SRLAILDYDRCQPRRCSMECMKYCPGVRMEEETIVMDENLGKPIISEELCSGCGICTKRCPFGAIRIIGLPEELTDDRIV HSYGQNRFRLYGLITPRDGVTGLLGPNGVGKSTIIKALSGEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLKNNGIK PIHKPQYVDVLPKVVKGKVGELLKKVDEKGEFEKIINALEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPTS WLDVKQRFSAAKVIREVAEGKKVVAVEHDLIVLDYLSDYIHIMYGIPSAYGVVTHPRGTRVGINTYLDGFLKEENIRFRK SPIVFEKRPPQDSTNRPLLLDYTDISKKLGDFSLNVNGGQIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVTGDVK VSYKPQYISSDFEGTVEDLLMSITAIHTSYYKSEIIKPLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPSA FLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRFIVFSGIAGSSGTGSEPLQKRAGANKFLKEMGITFRRDP DTGRPRVNKEGSQRDVYQKEIGEYYYLDE
Specific function: Unknown
COG id: COG1245
COG function: function code R; Predicted ATPase, RNase L inhibitor (RLI) homolog
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI108773784, Length=598, Percent_Identity=45.819397993311, Blast_Score=550, Evalue=1e-156, Organism=Homo sapiens, GI108773782, Length=598, Percent_Identity=45.819397993311, Blast_Score=550, Evalue=1e-156, Organism=Homo sapiens, GI157502201, Length=359, Percent_Identity=25.0696378830084, Blast_Score=68, Evalue=2e-11, Organism=Homo sapiens, GI157502203, Length=230, Percent_Identity=27.3913043478261, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI90421313, Length=155, Percent_Identity=30.3225806451613, Blast_Score=67, Evalue=5e-11, Organism=Escherichia coli, GI48994943, Length=495, Percent_Identity=21.4141414141414, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI1788165, Length=195, Percent_Identity=27.6923076923077, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1789593, Length=223, Percent_Identity=30.0448430493274, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1787500, Length=206, Percent_Identity=27.1844660194175, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1786803, Length=190, Percent_Identity=30.5263157894737, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786345, Length=218, Percent_Identity=26.605504587156, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1788761, Length=229, Percent_Identity=27.9475982532751, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1787112, Length=239, Percent_Identity=27.6150627615063, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI87081782, Length=216, Percent_Identity=27.3148148148148, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1789891, Length=191, Percent_Identity=24.0837696335079, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1790467, Length=197, Percent_Identity=27.4111675126904, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788002, Length=234, Percent_Identity=26.4957264957265, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1787089, Length=189, Percent_Identity=32.8042328042328, Blast_Score=65, Evalue=8e-12, Organism=Escherichia coli, GI87081709, Length=203, Percent_Identity=29.5566502463054, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI87081791, Length=178, Percent_Identity=28.6516853932584, Blast_Score=64, Evalue=4e-11, Organism=Escherichia coli, GI1789962, Length=204, Percent_Identity=25, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17555800, Length=595, Percent_Identity=45.8823529411765, Blast_Score=546, Evalue=1e-155, Organism=Saccharomyces cerevisiae, GI6320296, Length=602, Percent_Identity=46.0132890365449, Blast_Score=539, Evalue=1e-154, Organism=Drosophila melanogaster, GI24661270, Length=596, Percent_Identity=46.1409395973154, Blast_Score=536, Evalue=1e-152, Organism=Drosophila melanogaster, GI21355589, Length=596, Percent_Identity=46.1409395973154, Blast_Score=536, Evalue=1e-152, Organism=Drosophila melanogaster, GI24585091, Length=254, Percent_Identity=25.5905511811024, Blast_Score=65, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013283 - InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR007209 [H]
Pfam domain/function: PF00005 ABC_tran; PF04068 RLI [H]
EC number: NA
Molecular weight: Translated: 65930; Mature: 65799
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS00198 4FE4S_FERREDOXIN ; PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLAILDYDRCQPRRCSMECMKYCPGVRMEEETIVMDENLGKPIISEELCSGCGICTKR CCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHCCCCCCCCC CPFGAIRIIGLPEELTDDRIVHSYGQNRFRLYGLITPRDGVTGLLGPNGVGKSTIIKALS CCCCEEEEEECCHHHCCCHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHC GEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLKNNGIKPIHKPQYVDVLPKVVKGKV CCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHH GELLKKVDEKGEFEKIINALEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCC SWLDVKQRFSAAKVIREVAEGKKVVAVEHDLIVLDYLSDYIHIMYGIPSAYGVVTHPRGT HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEHHHHHHHHHHHHCCCCCCCEEECCCCC RVGINTYLDGFLKEENIRFRKSPIVFEKRPPQDSTNRPLLLDYTDISKKLGDFSLNVNGG EEEHHHHHHHHHCCCCCEEECCCEEEECCCCCCCCCCCEEEEHHHHHHHHCCEEEECCCC QIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVTGDVKVSYKPQYISSDFEGTVEDL EEEECEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCHHCCCCCHHHHHH LMSITAIHTSYYKSEIIKPLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCH AFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRFIVFSGIAGSSGTGSEPL HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCEEEEECCCCCCCCCCCHH QKRAGANKFLKEMGITFRRDPDTGRPRVNKEGSQRDVYQKEIGEYYYLDE HHHCCHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEECCC >Mature Secondary Structure SRLAILDYDRCQPRRCSMECMKYCPGVRMEEETIVMDENLGKPIISEELCSGCGICTKR CCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHCCCCCCCCC CPFGAIRIIGLPEELTDDRIVHSYGQNRFRLYGLITPRDGVTGLLGPNGVGKSTIIKALS CCCCEEEEEECCHHHCCCHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHC GEMVLNLNDLTETPDMKKVLDYFSGTELQNYFEKLKNNGIKPIHKPQYVDVLPKVVKGKV CCEEEEECCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHH GELLKKVDEKGEFEKIINALEISNILDRTFDQLSGGELQRVAIAAACLREGDIYYFDEPT HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEECCCC SWLDVKQRFSAAKVIREVAEGKKVVAVEHDLIVLDYLSDYIHIMYGIPSAYGVVTHPRGT HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEHHHHHHHHHHHHCCCCCCCEEECCCCC RVGINTYLDGFLKEENIRFRKSPIVFEKRPPQDSTNRPLLLDYTDISKKLGDFSLNVNGG EEEHHHHHHHHHCCCCCEEECCCEEEECCCCCCCCCCCEEEEHHHHHHHHCCEEEECCCC QIYQGEVVGILGPNGIGKTTFVKALAGVISPDSGEVTGDVKVSYKPQYISSDFEGTVEDL EEEECEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCHHCCCCCHHHHHH LMSITAIHTSYYKSEIIKPLALENILDSSVKDLSGGELQRVSIAACLSQDADLYLIDEPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCH AFLDVEQRLTTSRVIRRMADEKEAAMFVVDHDILFQDYISDRFIVFSGIAGSSGTGSEPL HHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHCCCEEEEECCCCCCCCCCCHH QKRAGANKFLKEMGITFRRDPDTGRPRVNKEGSQRDVYQKEIGEYYYLDE HHHCCHHHHHHHCCCEEECCCCCCCCCCCCCCCHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]