| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is yjeE [C]
Identifier: 42523411
GI number: 42523411
Start: 1845610
End: 1846053
Strand: Direct
Name: yjeE [C]
Synonym: Bd1933
Alternate gene names: 42523411
Gene position: 1845610-1846053 (Clockwise)
Preceding gene: 42523410
Following gene: 42523416
Centisome position: 48.79
GC content: 49.32
Gene sequence:
>444_bases ATGACCATTCTGAATTCCCAACACATCCTAAAAAACCTCCAGGAGCTGAAAAGCTTCTGGCAGGATTTTTTGCCGCACCT GAATGACCGCTGTATTTTGCTGATGAGCGGGGATGTCGGTGCGGGTAAAACGACGTCGGTGCAAATGATTGCCGGCGAGT TGGGAATGCGCGATGTTCAGTCACCAAGCTTTGCCATTCATCTGCGCTATGAAAACGCGGAAGGCAAAGCCATGGATCAC CTGGATCTGTATCGCCTGAAAGATGATGATGATCTGGAAAGTTCCGGTTTCTGGGACCTGTTTGCCCAGAAAAATTCACT GATTATTATCGAATGGGCGAACCGCCTGGATTTCGATTATCTGCCACTCAACTGGCAGCGCATCGAGGTGCGCTTCGAAA AACTCAGCGACACCGAAAGAAAAATCACCACCCGCCAAGTCTAA
Upstream 100 bases:
>100_bases CATCTTCAGGAAGTGAATATTGGGCATTCTCTGGTGTGTTATGCACTAGAGCATGGTATGGAAGAATCTGTTCGTAAGAT GAGAAAAATCCTGAAATAAT
Downstream 100 bases:
>100_bases TAGGTGATGCGTTAGTTGTAGCCGTTTTGATAGGCCATTTCATAGTTCGGGAAGAAGACTCGTTTCCAGACGGGGATCTT GTTGATCTCTTCTGGTGGGA
Product: putative ATPase/GTPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTILNSQHILKNLQELKSFWQDFLPHLNDRCILLMSGDVGAGKTTSVQMIAGELGMRDVQSPSFAIHLRYENAEGKAMDH LDLYRLKDDDDLESSGFWDLFAQKNSLIIIEWANRLDFDYLPLNWQRIEVRFEKLSDTERKITTRQV
Sequences:
>Translated_147_residues MTILNSQHILKNLQELKSFWQDFLPHLNDRCILLMSGDVGAGKTTSVQMIAGELGMRDVQSPSFAIHLRYENAEGKAMDH LDLYRLKDDDDLESSGFWDLFAQKNSLIIIEWANRLDFDYLPLNWQRIEVRFEKLSDTERKITTRQV >Mature_146_residues TILNSQHILKNLQELKSFWQDFLPHLNDRCILLMSGDVGAGKTTSVQMIAGELGMRDVQSPSFAIHLRYENAEGKAMDHL DLYRLKDDDDLESSGFWDLFAQKNSLIIIEWANRLDFDYLPLNWQRIEVRFEKLSDTERKITTRQV
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17175; Mature: 17044
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILNSQHILKNLQELKSFWQDFLPHLNDRCILLMSGDVGAGKTTSVQMIAGELGMRDVQ CCEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCC SPSFAIHLRYENAEGKAMDHLDLYRLKDDDDLESSGFWDLFAQKNSLIIIEWANRLDFDY CCCEEEEEEEECCCCCEECCEEEEEECCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCC LPLNWQRIEVRFEKLSDTERKITTRQV CCCCEEEEEEEEECCCCCHHHEEECCC >Mature Secondary Structure TILNSQHILKNLQELKSFWQDFLPHLNDRCILLMSGDVGAGKTTSVQMIAGELGMRDVQ CEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCC SPSFAIHLRYENAEGKAMDHLDLYRLKDDDDLESSGFWDLFAQKNSLIIIEWANRLDFDY CCCEEEEEEEECCCCCEECCEEEEEECCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCC LPLNWQRIEVRFEKLSDTERKITTRQV CCCCEEEEEEEEECCCCCHHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA