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The map label for this gene is 42522857

Identifier: 42522857

GI number: 42522857

Start: 1264057

End: 1264479

Strand: Direct

Name: 42522857

Synonym: Bd1337

Alternate gene names: NA

Gene position: 1264057-1264479 (Clockwise)

Preceding gene: 42522853

Following gene: 42522858

Centisome position: 33.41

GC content: 39.95

Gene sequence:

>423_bases
ATGGCAAAAGCAAAAGCTACAAAAAAAGCTACTACTAAGAAAGCAGCTCCTAAAAAAGCTGTAGCAAAAAAAGCAGCTCC
AAAAGCAGCTAAAAAAGCGGCTCCAAAAGCAGCAGCTAAAAAAGCAGCAGCTCCAAAAAAAGCAGCAGCTCCTAAAAAAG
CAAAAACTGCTCGTAAACCAAACGCAGCTTTCATGAAAGCGTTGACTCCATCTGCAGCTTTGGCAGCAGTTGTTGGTGCT
TCTCCACTTCCACGTACTGAAGTTGTTAAAAAACTTTGGGCTTACATCAAGAAGAACAACCTTCAAGACACTAAGAACAA
AAGAAACATCAATGCTGATGCAAAACTGAAAGAAGTTTTCGGCGGCAAAACTCAAGTTTCTATGTTCGACATGACTAAAC
TAGTTTCTAAACACCTTAAGTAG

Upstream 100 bases:

>100_bases
GATTTCCCCTGCATTTTTCTTTAGACAAACGACTGGACTTGGATACACACTAAGCTCATTCGAGATAAACAAGACTAAAA
ACCTAACGGAGGAATTTCGA

Downstream 100 bases:

>100_bases
TAGGTCGTTTAAAACGGGGAAAAAAGCCTAGGTAAAACCTAGGCTTTTTTTTTGCCTTCGTTTCGGGGCTGGTGAAAAAG
GCCCATCTCCTGCGTTGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: DNA poisomerase III; SWIB/MDM2 Domain Protein; SwiB Complex Protein; SWIB Complex; SWIB/MDM2 Domain Superfamily; DNA poisomerase Domain-Containing Protein; Swib/Mdm2 Domain Protein; SWIB Complex Protein

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MAKAKATKKATTKKAAPKKAVAKKAAPKAAKKAAPKAAAKKAAAPKKAAAPKKAKTARKPNAAFMKALTPSAALAAVVGA
SPLPRTEVVKKLWAYIKKNNLQDTKNKRNINADAKLKEVFGGKTQVSMFDMTKLVSKHLK

Sequences:

>Translated_140_residues
MAKAKATKKATTKKAAPKKAVAKKAAPKAAKKAAPKAAAKKAAAPKKAAAPKKAKTARKPNAAFMKALTPSAALAAVVGA
SPLPRTEVVKKLWAYIKKNNLQDTKNKRNINADAKLKEVFGGKTQVSMFDMTKLVSKHLK
>Mature_139_residues
AKAKATKKATTKKAAPKKAVAKKAAPKAAKKAAPKAAAKKAAAPKKAAAPKKAKTARKPNAAFMKALTPSAALAAVVGAS
PLPRTEVVKKLWAYIKKNNLQDTKNKRNINADAKLKEVFGGKTQVSMFDMTKLVSKHLK

Specific function: Unknown

COG id: COG5531

COG function: function code B; SWIB-domain-containing proteins implicated in chromatin remodeling

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6323889, Length=79, Percent_Identity=43.0379746835443, Blast_Score=75, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6324869, Length=72, Percent_Identity=45.8333333333333, Blast_Score=74, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14757; Mature: 14626

Theoretical pI: Translated: 11.65; Mature: 11.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKAKATKKATTKKAAPKKAVAKKAAPKAAKKAAPKAAAKKAAAPKKAAAPKKAKTARKP
CCCCHHHHHHHHHHCCHHHHHHHHHCHHHHHHHCHHHHHHHHCCCCHHCCCCHHHHCCCC
NAAFMKALTPSAALAAVVGASPLPRTEVVKKLWAYIKKNNLQDTKNKRNINADAKLKEVF
CHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHH
GGKTQVSMFDMTKLVSKHLK
CCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AKAKATKKATTKKAAPKKAVAKKAAPKAAKKAAPKAAAKKAAAPKKAAAPKKAKTARKP
CCCHHHHHHHHHHCCHHHHHHHHHCHHHHHHHCHHHHHHHHCCCCHHCCCCHHHHCCCC
NAAFMKALTPSAALAAVVGASPLPRTEVVKKLWAYIKKNNLQDTKNKRNINADAKLKEVF
CHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHH
GGKTQVSMFDMTKLVSKHLK
CCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA