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The map label for this gene is 42522853

Identifier: 42522853

GI number: 42522853

Start: 1257614

End: 1258447

Strand: Direct

Name: 42522853

Synonym: Bd1333

Alternate gene names: NA

Gene position: 1257614-1258447 (Clockwise)

Preceding gene: 42522852

Following gene: 42522857

Centisome position: 33.24

GC content: 50.48

Gene sequence:

>834_bases
ATGAAAAACCAGTGGGTGAGAGCAGGGTTATTCCTGCTCTTTCTTTTTGTGGCTTCACGATGGGTCCCACCGCATCCGGT
GGACCCCTGGGGACTTTTCCGTCCTCAGAAAATTCTTTTTATGTTTTTCGCCCTGTCAGCCCTTCAGGTGGTGGGCAAGG
CTTTTTCAATTTGGATCGGCCGGAAAGCCGGCGTCATTCTGACCGGTTTTTTGGGTGGTTTGCTTTCCAGTACAGCGACC
ACCGTCACGTTGGCCAAAGAAAGTCACGAACCCGTAGGATCGCAGACTCTGCGTCTGGCGGCCCTGCAAAGTGCGATTTT
GGCGATGCTGGTTCAGGCCGCGGTGCTAATCAGAGCTGGAGGAATTGCAGCTTTTGAGTTGGTGGGGCTGCATTTTGCGA
TTTTGTCGCTGATCACTCTTTCTTTGATTGGATTGTTATGGCGGCGCAAACCGCAATCACATCCGGTGATTGCGGGGACC
GAAAGAATACTCGATATCCGATCTTCATTAAAACTCACGGTGTTCATTGTGCTGATTCTGTCGGCTTCCAAACTTGTGCA
AGAGTGGGCGGGCAGTCAGGGGTTGATGATTCTGACTTTTGTGATCTCGCTGTTTGAGGTGCATGGATCTTTGATTTCGA
CCTCTCAGCTGCTTGCGGCGGGAAAAGTCGATGGCTTTCAATATGAGCGACTTGTGGAAGCCTCTTTGATGGCAAGTTAC
GTTTCAAAGTTTGCGCTGGTTGCGACGATATCAAGTTCGGGGTTTCGCAAAAAGGCCTTAATGACCTTGGCCCCTGGGAT
GTTGTTTATACTGTTGCATCTTACCAGCAGGTGA

Upstream 100 bases:

>100_bases
TTGAATTCTATCCTGGAAACTTCACCGAATACGAAGAAGACCGTAAACGTCGTCTGGGCGAAAATGCGGGACCAAAACGC
ATTCGCTTCAAAATGGTGTA

Downstream 100 bases:

>100_bases
AATTTGTATTGTTTATGCGGCCGAACATATGCTCCACACGCCAGTTTGAAACGGCGGGGTCATAGTGAAGGGTCGCAAAG
ACTTGTCCCATTCCAATAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MKNQWVRAGLFLLFLFVASRWVPPHPVDPWGLFRPQKILFMFFALSALQVVGKAFSIWIGRKAGVILTGFLGGLLSSTAT
TVTLAKESHEPVGSQTLRLAALQSAILAMLVQAAVLIRAGGIAAFELVGLHFAILSLITLSLIGLLWRRKPQSHPVIAGT
ERILDIRSSLKLTVFIVLILSASKLVQEWAGSQGLMILTFVISLFEVHGSLISTSQLLAAGKVDGFQYERLVEASLMASY
VSKFALVATISSSGFRKKALMTLAPGMLFILLHLTSR

Sequences:

>Translated_277_residues
MKNQWVRAGLFLLFLFVASRWVPPHPVDPWGLFRPQKILFMFFALSALQVVGKAFSIWIGRKAGVILTGFLGGLLSSTAT
TVTLAKESHEPVGSQTLRLAALQSAILAMLVQAAVLIRAGGIAAFELVGLHFAILSLITLSLIGLLWRRKPQSHPVIAGT
ERILDIRSSLKLTVFIVLILSASKLVQEWAGSQGLMILTFVISLFEVHGSLISTSQLLAAGKVDGFQYERLVEASLMASY
VSKFALVATISSSGFRKKALMTLAPGMLFILLHLTSR
>Mature_277_residues
MKNQWVRAGLFLLFLFVASRWVPPHPVDPWGLFRPQKILFMFFALSALQVVGKAFSIWIGRKAGVILTGFLGGLLSSTAT
TVTLAKESHEPVGSQTLRLAALQSAILAMLVQAAVLIRAGGIAAFELVGLHFAILSLITLSLIGLLWRRKPQSHPVIAGT
ERILDIRSSLKLTVFIVLILSASKLVQEWAGSQGLMILTFVISLFEVHGSLISTSQLLAAGKVDGFQYERLVEASLMASY
VSKFALVATISSSGFRKKALMTLAPGMLFILLHLTSR

Specific function: Unknown

COG id: COG3174

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30098; Mature: 30098

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNQWVRAGLFLLFLFVASRWVPPHPVDPWGLFRPQKILFMFFALSALQVVGKAFSIWIG
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
RKAGVILTGFLGGLLSSTATTVTLAKESHEPVGSQTLRLAALQSAILAMLVQAAVLIRAG
CCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GIAAFELVGLHFAILSLITLSLIGLLWRRKPQSHPVIAGTERILDIRSSLKLTVFIVLIL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
SASKLVQEWAGSQGLMILTFVISLFEVHGSLISTSQLLAAGKVDGFQYERLVEASLMASY
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VSKFALVATISSSGFRKKALMTLAPGMLFILLHLTSR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNQWVRAGLFLLFLFVASRWVPPHPVDPWGLFRPQKILFMFFALSALQVVGKAFSIWIG
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
RKAGVILTGFLGGLLSSTATTVTLAKESHEPVGSQTLRLAALQSAILAMLVQAAVLIRAG
CCCCHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GIAAFELVGLHFAILSLITLSLIGLLWRRKPQSHPVIAGTERILDIRSSLKLTVFIVLIL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHH
SASKLVQEWAGSQGLMILTFVISLFEVHGSLISTSQLLAAGKVDGFQYERLVEASLMASY
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
VSKFALVATISSSGFRKKALMTLAPGMLFILLHLTSR
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA