| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522708
Identifier: 42522708
GI number: 42522708
Start: 1109326
End: 1110231
Strand: Direct
Name: 42522708
Synonym: Bd1168
Alternate gene names: NA
Gene position: 1109326-1110231 (Clockwise)
Preceding gene: 42522707
Following gene: 42522709
Centisome position: 29.32
GC content: 48.9
Gene sequence:
>906_bases GTGACAACGAAGGCATTTGCTGAATATTTTATTATAAGTCTGCCGTATGTGATGGGCGCCGTCTTTCTGGTCGGTTTGTT CTTCCGCGCGGTAATCTATTACACGGTCCGCCGCCATGAATCCTTCGCGCGTGAATTTGAAAAACGTGTGAATCGTTTCA TCGAAGCTGAAGTTCCCGGCAAAGTCGAGAACGTGTCTTTCTATGTGCTGACCAAAAAGCTTTTGGAAAGAACCTATTAC GAAGTATTTGAAATCCGCGACCGCATGAAACGCAGAAAGCCCGACAATGTCATGTCCGCCAGTGACCGTGTGTTCCTGGT TCGTCAGGGCTGTGCCTGGCTGGTGAAAGACATCCTGAAACAGGTGAAGTTCCTGCGCTGGACGGATGACAATCCGAAGC TGTTAAATATCACCAAGGCGACTTTGCAACATAATCCTTGTTTCAACAAGGTGTTTGGCGTGATCCCGATGGTGGGTATG AACGACTTGATCTCTATTTTGCCAGGTCTGTTTGTCGTGGCGGGGATCCTAGGTACCTTCATCGGTATCGCGGGTGGTTT GCAGGAACTGGGCACGATGAATCTGCAGGATCTGGAAAACACCAAAAACATCATGGATCGTTTCCTTCACGAGATCTCTT TCGCGATGAAAACATCCATTGCGGGGATCATCTTCTCGTTGATGGCCCATGTGGCGAACGTGATTCTTTCCCCGGAAAGA GCTTATGTGTCCATGATCGACCGTTTCGAGAGCTCTTTGGATTTGTTGTGGTATCGCGCGGACAACAATAATTTCCCAGC TCATGAGCGCCCATTTGATGAACATCGTGATGCCGTTGAAGCTTTGGCCGAAGATGCCCTGAACAAGGAAATCGGAAAAA CTGCGGCGGTGGTCAGAGGAGCTTAA
Upstream 100 bases:
>100_bases CGCCACAGCAGCCGAATTCTGCAAGCAGAACGACTGTAAGAAGGCGCAGCGGGTAATCATCCGCTTTAACATGGATCCGA AGAAATAAAAGGGGTGGGTT
Downstream 100 bases:
>100_bases TTGAACAAGTTTATAGTCACAATCCACAGGAAGGATCAGGTGCTAAGCCGTGAGGTGAACAAGGACTCGTTCACCATGGG CCGCTCTTTGGACTGTGACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MTTKAFAEYFIISLPYVMGAVFLVGLFFRAVIYYTVRRHESFAREFEKRVNRFIEAEVPGKVENVSFYVLTKKLLERTYY EVFEIRDRMKRRKPDNVMSASDRVFLVRQGCAWLVKDILKQVKFLRWTDDNPKLLNITKATLQHNPCFNKVFGVIPMVGM NDLISILPGLFVVAGILGTFIGIAGGLQELGTMNLQDLENTKNIMDRFLHEISFAMKTSIAGIIFSLMAHVANVILSPER AYVSMIDRFESSLDLLWYRADNNNFPAHERPFDEHRDAVEALAEDALNKEIGKTAAVVRGA
Sequences:
>Translated_301_residues MTTKAFAEYFIISLPYVMGAVFLVGLFFRAVIYYTVRRHESFAREFEKRVNRFIEAEVPGKVENVSFYVLTKKLLERTYY EVFEIRDRMKRRKPDNVMSASDRVFLVRQGCAWLVKDILKQVKFLRWTDDNPKLLNITKATLQHNPCFNKVFGVIPMVGM NDLISILPGLFVVAGILGTFIGIAGGLQELGTMNLQDLENTKNIMDRFLHEISFAMKTSIAGIIFSLMAHVANVILSPER AYVSMIDRFESSLDLLWYRADNNNFPAHERPFDEHRDAVEALAEDALNKEIGKTAAVVRGA >Mature_300_residues TTKAFAEYFIISLPYVMGAVFLVGLFFRAVIYYTVRRHESFAREFEKRVNRFIEAEVPGKVENVSFYVLTKKLLERTYYE VFEIRDRMKRRKPDNVMSASDRVFLVRQGCAWLVKDILKQVKFLRWTDDNPKLLNITKATLQHNPCFNKVFGVIPMVGMN DLISILPGLFVVAGILGTFIGIAGGLQELGTMNLQDLENTKNIMDRFLHEISFAMKTSIAGIIFSLMAHVANVILSPERA YVSMIDRFESSLDLLWYRADNNNFPAHERPFDEHRDAVEALAEDALNKEIGKTAAVVRGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34432; Mature: 34300
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKAFAEYFIISLPYVMGAVFLVGLFFRAVIYYTVRRHESFAREFEKRVNRFIEAEVPG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KVENVSFYVLTKKLLERTYYEVFEIRDRMKRRKPDNVMSASDRVFLVRQGCAWLVKDILK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEEHHHHHHHHHHHHH QVKFLRWTDDNPKLLNITKATLQHNPCFNKVFGVIPMVGMNDLISILPGLFVVAGILGTF HHHHHHCCCCCCCEEEHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IGIAGGLQELGTMNLQDLENTKNIMDRFLHEISFAMKTSIAGIIFSLMAHVANVILSPER HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AYVSMIDRFESSLDLLWYRADNNNFPAHERPFDEHRDAVEALAEDALNKEIGKTAAVVRG HHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC A C >Mature Secondary Structure TTKAFAEYFIISLPYVMGAVFLVGLFFRAVIYYTVRRHESFAREFEKRVNRFIEAEVPG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC KVENVSFYVLTKKLLERTYYEVFEIRDRMKRRKPDNVMSASDRVFLVRQGCAWLVKDILK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCEEEEHHHHHHHHHHHHH QVKFLRWTDDNPKLLNITKATLQHNPCFNKVFGVIPMVGMNDLISILPGLFVVAGILGTF HHHHHHCCCCCCCEEEHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH IGIAGGLQELGTMNLQDLENTKNIMDRFLHEISFAMKTSIAGIIFSLMAHVANVILSPER HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH AYVSMIDRFESSLDLLWYRADNNNFPAHERPFDEHRDAVEALAEDALNKEIGKTAAVVRG HHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC A C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA