Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522709

Identifier: 42522709

GI number: 42522709

Start: 1110232

End: 1112616

Strand: Direct

Name: 42522709

Synonym: Bd1169

Alternate gene names: NA

Gene position: 1110232-1112616 (Clockwise)

Preceding gene: 42522708

Following gene: 42522713

Centisome position: 29.35

GC content: 51.53

Gene sequence:

>2385_bases
TTGAACAAGTTTATAGTCACAATCCACAGGAAGGATCAGGTGCTAAGCCGTGAGGTGAACAAGGACTCGTTCACCATGGG
CCGCTCTTTGGACTGTGACTTGTCCTTGAACGACAACAACATCAGCCGGGTTCATCTGGTTGTGAGCCGTCGTTGGAATC
AGATCTGGATTGAGGATAAAAACTCCTCCAACGGGACCTTCATCAACGGCACTCGTATAGTGCAAGGGACCCCGGTGAAC
GTGGTTCCTTCAGATCGCATTCAGTTGGGCCGTTCAGAATACATCCTGAACCTGGATCTTTTCGTCGAAGAGCCCGCACC
GGAACCAGAACCCGAGCCGTCGATTTCTCAATCCGCGGCAACCGTGCCGGAAGAAGAAGACGCCCCACTGGAAGCCACGG
TGGCCATGCCGGCACCAAACATGGCGCCTTTCCAGGCGGAAAAAATCCTGCACGAAGCCAAGCGCAAAGCGGCGCAAATC
ATCATGGAAGGCGAAACCCAGGCTGAACGCCGGGTGCAGGTCATCTATCAGAAAGCCCGCGAAGCTCAGGCTCAGGCTGA
GCTGTTCTATCAGACCCGCATGGCAGAAGCGCACAAGGAAGCGGATGCCATCTTGGCGGACTTCCAAAAGCAGGGGCAAA
GCCTGCTGCATGAGGCGCGCAATATGTCCCAGGAACTGCGTGAAGAAGTCGATTCTTACGTTCAGAGCCTGCGCCAGAAG
GCTCGCAAAGACACTGAAGACATCATTTCGGAAGCCACACTTGCGGCCGAGAAAATGAAAGACGAAGCCATTGCCCACGG
TCGTGAGCTGGCCCGTCAGGAAAGCGAAGCGCTGCTTAAAACCAGCCGCGAGGAAGCGGACCGTATTCTGGATTTCTCGA
AACTTCAGATCGAGGAAACTCAAGCCCGTATTCGCACGGATCTGGAAAATGCCCAGGAACTGAATCAGCGCACTTTGCAG
GAGGCCCAGGCTGAAGCCGAAAGACTGCTGAATGAATCCCGCATGCAGATTCGCGATGCGGAGGCGCGCTTGCGCGAAGA
ATCTGAACAAGCCCGCAATGACAATGCTTCTTTGATTGCCACAGCCAAGGAAACCGCCGACCAGCTTTTGCAGAAGGCCA
AGGCCGACTGTGAACAGCAGATTCAAATGGCGAACGAAAAAGTTCAGGAAATCACGGCTGTCAGCAATGAAAAGCAGACC
GTTTTAAACGAACTTATGAATAACGTTGCGGCCCGCACGGCGGAACTGCAAAAAGCCACTGAAGAGTTGAGCAAAACCCG
TACTGATAATTCCGATCTGCTGTCGCAGGTGGAAAAAGGCCAGGCTTTGCTGAAAGAGCTTCAGACTTCCCATACGGAGC
TGGAAAAACAAAAAGCCGCATTGGAAGCTTCTTTGAAAGGTCTGCAGGAAAAGCAGGCCCATCTGACAATGGACGTGCAT
GACATCGAATCCAAAAAGGCTCATTTGTTTAAGGAATACGATGCGCAAAAGATCTTCCTGAACGAAAAGCTGGAAAAAGA
AAAGACCCAGATGGCGAAGTCCGAAGAGGAGCGTCTGGAAGAAATGCGTCTGGATATGTCCAAACGCCTGCAGAAAATGG
AGCGCGATCTGCTGGATGATGTGATCCGCAAGAAGAACTCCATGGTGAAGGACATCCACTCGGCTATTGAAAAAGAGATC
GTGATGCTGATGGAGCCTGAAAAATGGCGCAACGTCAGCCAGTCCGTGGAAAATCATATTGCTGAAGCCATCGACGGTAA
AGTGGCGTCCCTGTCCCAGTCGTCAATGAGTGAAAAACCGGTCGATCTGATGAAAAAACGCAAAAGCGAAAAACTTCGCT
GGGTCACCATGGGTCTTGCCATGGGGGCCGTGGGTTATTTCGTCAGTCAGATTGTCGTGGACCGTGTCGTGAAAGACCAG
AGTCCCATGCAGACCATGGTCAGCAACGAAGCGAAGAAACGTCAGGACGATCTGGAAAAACGCAAATTCAATCCTCCGCA
GGCGGAGGAGATCAAAGACTCTTATACAGATGCAGTTATTTACACGCGTAACTATATGGATATCTATACCGATGCCCAGT
TCCAGCAGAAGCTTTACAAGGCGGCTTCCCAGTATCTGCTGAAAACCTGGCGTGTGGATGAAGACAAGTCCATTCAGGTC
ATTTCATCCGCCAATGCCTTGGTGAAGGAACTGGCCGACAAGAAATCAAAAATCCATCCGGACTTTATCAAAGAAGGTAT
CGAAAAGATGCGCGAGCTGGAAAACCAGACTTTGGCGCGCATGAAAGATGTCCTGGGTACCGAAGTCCGCCTGGAATCCT
ATCGCCGTTTCGAGCGCAATTTCTATAAAGAAGAAGTCCAACGCCGCCGCATGGCCAACTATTGA

Upstream 100 bases:

>100_bases
GCGCCCATTTGATGAACATCGTGATGCCGTTGAAGCTTTGGCCGAAGATGCCCTGAACAAGGAAATCGGAAAAACTGCGG
CGGTGGTCAGAGGAGCTTAA

Downstream 100 bases:

>100_bases
TATAACGGCACTTTCATTTGTCGGATGATCTTCCAGTACTCGGCAGGTTTGTCTTTCTGGGCATTTTCACTGAAAAGATA
TGCATTCAGCTGGCGGGCCT

Product: large Ala/Glu-rich protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 794; Mature: 794

Protein sequence:

>794_residues
MNKFIVTIHRKDQVLSREVNKDSFTMGRSLDCDLSLNDNNISRVHLVVSRRWNQIWIEDKNSSNGTFINGTRIVQGTPVN
VVPSDRIQLGRSEYILNLDLFVEEPAPEPEPEPSISQSAATVPEEEDAPLEATVAMPAPNMAPFQAEKILHEAKRKAAQI
IMEGETQAERRVQVIYQKAREAQAQAELFYQTRMAEAHKEADAILADFQKQGQSLLHEARNMSQELREEVDSYVQSLRQK
ARKDTEDIISEATLAAEKMKDEAIAHGRELARQESEALLKTSREEADRILDFSKLQIEETQARIRTDLENAQELNQRTLQ
EAQAEAERLLNESRMQIRDAEARLREESEQARNDNASLIATAKETADQLLQKAKADCEQQIQMANEKVQEITAVSNEKQT
VLNELMNNVAARTAELQKATEELSKTRTDNSDLLSQVEKGQALLKELQTSHTELEKQKAALEASLKGLQEKQAHLTMDVH
DIESKKAHLFKEYDAQKIFLNEKLEKEKTQMAKSEEERLEEMRLDMSKRLQKMERDLLDDVIRKKNSMVKDIHSAIEKEI
VMLMEPEKWRNVSQSVENHIAEAIDGKVASLSQSSMSEKPVDLMKKRKSEKLRWVTMGLAMGAVGYFVSQIVVDRVVKDQ
SPMQTMVSNEAKKRQDDLEKRKFNPPQAEEIKDSYTDAVIYTRNYMDIYTDAQFQQKLYKAASQYLLKTWRVDEDKSIQV
ISSANALVKELADKKSKIHPDFIKEGIEKMRELENQTLARMKDVLGTEVRLESYRRFERNFYKEEVQRRRMANY

Sequences:

>Translated_794_residues
MNKFIVTIHRKDQVLSREVNKDSFTMGRSLDCDLSLNDNNISRVHLVVSRRWNQIWIEDKNSSNGTFINGTRIVQGTPVN
VVPSDRIQLGRSEYILNLDLFVEEPAPEPEPEPSISQSAATVPEEEDAPLEATVAMPAPNMAPFQAEKILHEAKRKAAQI
IMEGETQAERRVQVIYQKAREAQAQAELFYQTRMAEAHKEADAILADFQKQGQSLLHEARNMSQELREEVDSYVQSLRQK
ARKDTEDIISEATLAAEKMKDEAIAHGRELARQESEALLKTSREEADRILDFSKLQIEETQARIRTDLENAQELNQRTLQ
EAQAEAERLLNESRMQIRDAEARLREESEQARNDNASLIATAKETADQLLQKAKADCEQQIQMANEKVQEITAVSNEKQT
VLNELMNNVAARTAELQKATEELSKTRTDNSDLLSQVEKGQALLKELQTSHTELEKQKAALEASLKGLQEKQAHLTMDVH
DIESKKAHLFKEYDAQKIFLNEKLEKEKTQMAKSEEERLEEMRLDMSKRLQKMERDLLDDVIRKKNSMVKDIHSAIEKEI
VMLMEPEKWRNVSQSVENHIAEAIDGKVASLSQSSMSEKPVDLMKKRKSEKLRWVTMGLAMGAVGYFVSQIVVDRVVKDQ
SPMQTMVSNEAKKRQDDLEKRKFNPPQAEEIKDSYTDAVIYTRNYMDIYTDAQFQQKLYKAASQYLLKTWRVDEDKSIQV
ISSANALVKELADKKSKIHPDFIKEGIEKMRELENQTLARMKDVLGTEVRLESYRRFERNFYKEEVQRRRMANY
>Mature_794_residues
MNKFIVTIHRKDQVLSREVNKDSFTMGRSLDCDLSLNDNNISRVHLVVSRRWNQIWIEDKNSSNGTFINGTRIVQGTPVN
VVPSDRIQLGRSEYILNLDLFVEEPAPEPEPEPSISQSAATVPEEEDAPLEATVAMPAPNMAPFQAEKILHEAKRKAAQI
IMEGETQAERRVQVIYQKAREAQAQAELFYQTRMAEAHKEADAILADFQKQGQSLLHEARNMSQELREEVDSYVQSLRQK
ARKDTEDIISEATLAAEKMKDEAIAHGRELARQESEALLKTSREEADRILDFSKLQIEETQARIRTDLENAQELNQRTLQ
EAQAEAERLLNESRMQIRDAEARLREESEQARNDNASLIATAKETADQLLQKAKADCEQQIQMANEKVQEITAVSNEKQT
VLNELMNNVAARTAELQKATEELSKTRTDNSDLLSQVEKGQALLKELQTSHTELEKQKAALEASLKGLQEKQAHLTMDVH
DIESKKAHLFKEYDAQKIFLNEKLEKEKTQMAKSEEERLEEMRLDMSKRLQKMERDLLDDVIRKKNSMVKDIHSAIEKEI
VMLMEPEKWRNVSQSVENHIAEAIDGKVASLSQSSMSEKPVDLMKKRKSEKLRWVTMGLAMGAVGYFVSQIVVDRVVKDQ
SPMQTMVSNEAKKRQDDLEKRKFNPPQAEEIKDSYTDAVIYTRNYMDIYTDAQFQQKLYKAASQYLLKTWRVDEDKSIQV
ISSANALVKELADKKSKIHPDFIKEGIEKMRELENQTLARMKDVLGTEVRLESYRRFERNFYKEEVQRRRMANY

Specific function: Unknown

COG id: COG1716

COG function: function code T; FOG: FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 91391; Mature: 91391

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKFIVTIHRKDQVLSREVNKDSFTMGRSLDCDLSLNDNNISRVHLVVSRRWNQIWIEDK
CCCEEEEEECHHHHHHHHCCCCHHCCCCCCCCEEEECCCCCCEEEEEEECCCCEEEEECC
NSSNGTFINGTRIVQGTPVNVVPSDRIQLGRSEYILNLDLFVEEPAPEPEPEPSISQSAA
CCCCCCEEECCEEEECCCCCCCCCHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHC
TVPEEEDAPLEATVAMPAPNMAPFQAEKILHEAKRKAAQIIMEGETQAERRVQVIYQKAR
CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EAQAQAELFYQTRMAEAHKEADAILADFQKQGQSLLHEARNMSQELREEVDSYVQSLRQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARKDTEDIISEATLAAEKMKDEAIAHGRELARQESEALLKTSREEADRILDFSKLQIEET
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QARIRTDLENAQELNQRTLQEAQAEAERLLNESRMQIRDAEARLREESEQARNDNASLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
TAKETADQLLQKAKADCEQQIQMANEKVQEITAVSNEKQTVLNELMNNVAARTAELQKAT
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
EELSKTRTDNSDLLSQVEKGQALLKELQTSHTELEKQKAALEASLKGLQEKQAHLTMDVH
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHH
DIESKKAHLFKEYDAQKIFLNEKLEKEKTQMAKSEEERLEEMRLDMSKRLQKMERDLLDD
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIRKKNSMVKDIHSAIEKEIVMLMEPEKWRNVSQSVENHIAEAIDGKVASLSQSSMSEKP
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
VDLMKKRKSEKLRWVTMGLAMGAVGYFVSQIVVDRVVKDQSPMQTMVSNEAKKRQDDLEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RKFNPPQAEEIKDSYTDAVIYTRNYMDIYTDAQFQQKLYKAASQYLLKTWRVDEDKSIQV
HCCCCCCHHHHHHHHCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
ISSANALVKELADKKSKIHPDFIKEGIEKMRELENQTLARMKDVLGTEVRLESYRRFERN
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYKEEVQRRRMANY
HHHHHHHHHHCCCC
>Mature Secondary Structure
MNKFIVTIHRKDQVLSREVNKDSFTMGRSLDCDLSLNDNNISRVHLVVSRRWNQIWIEDK
CCCEEEEEECHHHHHHHHCCCCHHCCCCCCCCEEEECCCCCCEEEEEEECCCCEEEEECC
NSSNGTFINGTRIVQGTPVNVVPSDRIQLGRSEYILNLDLFVEEPAPEPEPEPSISQSAA
CCCCCCEEECCEEEECCCCCCCCCHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCHHC
TVPEEEDAPLEATVAMPAPNMAPFQAEKILHEAKRKAAQIIMEGETQAERRVQVIYQKAR
CCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
EAQAQAELFYQTRMAEAHKEADAILADFQKQGQSLLHEARNMSQELREEVDSYVQSLRQK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARKDTEDIISEATLAAEKMKDEAIAHGRELARQESEALLKTSREEADRILDFSKLQIEET
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QARIRTDLENAQELNQRTLQEAQAEAERLLNESRMQIRDAEARLREESEQARNDNASLIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE
TAKETADQLLQKAKADCEQQIQMANEKVQEITAVSNEKQTVLNELMNNVAARTAELQKAT
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
EELSKTRTDNSDLLSQVEKGQALLKELQTSHTELEKQKAALEASLKGLQEKQAHLTMDVH
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECHH
DIESKKAHLFKEYDAQKIFLNEKLEKEKTQMAKSEEERLEEMRLDMSKRLQKMERDLLDD
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIRKKNSMVKDIHSAIEKEIVMLMEPEKWRNVSQSVENHIAEAIDGKVASLSQSSMSEKP
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
VDLMKKRKSEKLRWVTMGLAMGAVGYFVSQIVVDRVVKDQSPMQTMVSNEAKKRQDDLEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
RKFNPPQAEEIKDSYTDAVIYTRNYMDIYTDAQFQQKLYKAASQYLLKTWRVDEDKSIQV
HCCCCCCHHHHHHHHCCEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
ISSANALVKELADKKSKIHPDFIKEGIEKMRELENQTLARMKDVLGTEVRLESYRRFERN
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FYKEEVQRRRMANY
HHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA