Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522668

Identifier: 42522668

GI number: 42522668

Start: 1055489

End: 1055998

Strand: Direct

Name: 42522668

Synonym: Bd1120

Alternate gene names: NA

Gene position: 1055489-1055998 (Clockwise)

Preceding gene: 42522667

Following gene: 42522669

Centisome position: 27.9

GC content: 50.59

Gene sequence:

>510_bases
ATGAAGTTCATCACTAAAGTCAGTATTTATCTTTTCGCCTTCGTCGTTGTTTTCGCTCACGTTGAAACAGTTGAAGCCAA
ACGCCGCAACAATCATGAGGAATCCTGGGAAAAAAATCGCCAGAGTGAAGACTCTAGTTACGAGTCGGGCGCATTTTTGG
ATGAATCTGCCAGTGATTCCGATCTGGTACGGGCGGTGAATGAGCGCCGTCGTGAGGACTTTGTGGAGGGGGGCCGTCTG
ACAGTTGTAAAAATCCTGCCGGACGACAACAGTGGACTGGAGCATCAAAAGTGGGTGGTTCGTCTTTCCAATGGCGAGCT
TATGCAGGCTGTGTATAATCTGGATATGTGCCCACGTGTTCCTTTGAATGTTGGCGACGTAATCGCCATGGGTGGGCAGT
TTATTTGGACCAACAAAGGTGGACTGCTGCACTGGCTTCACCACGATCCCCGCGGCAGACGCCCGGATGGATATGTGTAC
GTGAACGGGCAGTACTACTGTAAGGAGTAG

Upstream 100 bases:

>100_bases
CGAAGAGTTCGTTACTATCGAGAACGTAGAGTTTAAGTAAATTTTACAGTTGTCTTTGTCTGTACATTTTTGCACACTCC
TGCGCATAGCAGGGGGAGCT

Downstream 100 bases:

>100_bases
ACTTGCAACGACTGAACCTGATTCCATGTGCAGCGCCTTTTTGGGCCGACAGTGGTCACGGTCAGACATTGTGGGCTCAC
TTCCTGAAGTCCGCAGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKFITKVSIYLFAFVVVFAHVETVEAKRRNNHEESWEKNRQSEDSSYESGAFLDESASDSDLVRAVNERRREDFVEGGRL
TVVKILPDDNSGLEHQKWVVRLSNGELMQAVYNLDMCPRVPLNVGDVIAMGGQFIWTNKGGLLHWLHHDPRGRRPDGYVY
VNGQYYCKE

Sequences:

>Translated_169_residues
MKFITKVSIYLFAFVVVFAHVETVEAKRRNNHEESWEKNRQSEDSSYESGAFLDESASDSDLVRAVNERRREDFVEGGRL
TVVKILPDDNSGLEHQKWVVRLSNGELMQAVYNLDMCPRVPLNVGDVIAMGGQFIWTNKGGLLHWLHHDPRGRRPDGYVY
VNGQYYCKE
>Mature_169_residues
MKFITKVSIYLFAFVVVFAHVETVEAKRRNNHEESWEKNRQSEDSSYESGAFLDESASDSDLVRAVNERRREDFVEGGRL
TVVKILPDDNSGLEHQKWVVRLSNGELMQAVYNLDMCPRVPLNVGDVIAMGGQFIWTNKGGLLHWLHHDPRGRRPDGYVY
VNGQYYCKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19479; Mature: 19479

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFITKVSIYLFAFVVVFAHVETVEAKRRNNHEESWEKNRQSEDSSYESGAFLDESASDS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHH
DLVRAVNERRREDFVEGGRLTVVKILPDDNSGLEHQKWVVRLSNGELMQAVYNLDMCPRV
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCC
PLNVGDVIAMGGQFIWTNKGGLLHWLHHDPRGRRPDGYVYVNGQYYCKE
CCCCCCEEEECCEEEEECCCCEEEEEECCCCCCCCCCEEEECCEEEECC
>Mature Secondary Structure
MKFITKVSIYLFAFVVVFAHVETVEAKRRNNHEESWEKNRQSEDSSYESGAFLDESASDS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCHH
DLVRAVNERRREDFVEGGRLTVVKILPDDNSGLEHQKWVVRLSNGELMQAVYNLDMCPRV
HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCHHHHHHHCCCCCCCC
PLNVGDVIAMGGQFIWTNKGGLLHWLHHDPRGRRPDGYVYVNGQYYCKE
CCCCCCEEEECCEEEEECCCCEEEEEECCCCCCCCCCEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA