Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

Click here to switch to the map view.

The map label for this gene is yheT [H]

Identifier: 42522669

GI number: 42522669

Start: 1056001

End: 1057005

Strand: Direct

Name: yheT [H]

Synonym: Bd1121

Alternate gene names: 42522669

Gene position: 1056001-1057005 (Clockwise)

Preceding gene: 42522668

Following gene: 42522671

Centisome position: 27.91

GC content: 52.44

Gene sequence:

>1005_bases
TTGCAACGACTGAACCTGATTCCATGTGCAGCGCCTTTTTGGGCCGACAGTGGTCACGGTCAGACATTGTGGGCTCACTT
CCTGAAGTCCGCAGAGCTTTCACATTTCGGCAAAAAATTTGAAGTCGATCTTCCTGACGGGGATCGACTTTTTTGTTCCT
GGCTCGAGGGCCACACCAATCTGGTGGTCAGTCTGTTTCACGGTCTTTCCGGGGATGTCACCTCGGACTATATGCAAAGA
ACCGCGCTGATCTGTCAGCAATTGGGGCATTCTGTTGTGCTGGTCAATCACCGTGGAGCTGGTGAGGGCGCGCCCTTTGC
AAAACGTCCGTATCATTCCGGCAGTGCCGAGGATGTGTCCGTGGTGCTGGGACAGCTTCGTCAGATGTTCCCGAATAAAA
AGCACATCTCGGTCGGATATTCGTTGAGTGGCAATATCATGCTGTGCCTGCTGGGCGGGTATGGTGGAAAGCACAAACCT
GACGGTGCGATCACCGTCAATGCGCCCTTAAATCTGCAATCAGGCTCATTGCTTTTAAAATCGGGCTTTAACCGTGTGTA
TGACATGCGTTTTGTTCTGCGCCTGCGCAAGCTGGTGGAAGAAAAGCACCGCCTGGGGCTGATCACGGAAAAATATGAAA
TTCCGAAGTGGGCCACGGTGTGGGATATGGATCAGATTTACACAGCGCCGGCGTCCGGCTTTGCCAGTCGCGAGGACTAC
TATCAGCGTTGTTCTTCGATTCAGTACGTTTCCGGTATTGATGTGCCGACTTACACCCTGACTTCGGCGGATGATCCGTT
TGTAGATGTCAGTGACTATCTGCGGGCACCATTCTCCAAGCACGTCCAACTGCATATTGAAAAGCGCGGCGGGCACATGG
GCTATCTGCACCGCCAGTCTTTGCCTGTGGGGGGAACGCGCTGGCTGGATTATTATTTGTATGAAGCCTTAAGAGGTCTT
GAAGGCACACTCAATGAAAAGGTTCCAGCGCTGTCTCCAAAGTGA

Upstream 100 bases:

>100_bases
ACAAAGGTGGACTGCTGCACTGGCTTCACCACGATCCCCGCGGCAGACGCCCGGATGGATATGTGTACGTGAACGGGCAG
TACTACTGTAAGGAGTAGAC

Downstream 100 bases:

>100_bases
GAAGCCTGGCAATGTCTGTCCTGATTCAAACACCGGAATTTCCAAAACGCGAAGCTGCTGACGGCGAAGGCCCCCCAGCA
GTTGGGGTCCCAGATACCAG

Product: esterase/lipase/thioesterase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MQRLNLIPCAAPFWADSGHGQTLWAHFLKSAELSHFGKKFEVDLPDGDRLFCSWLEGHTNLVVSLFHGLSGDVTSDYMQR
TALICQQLGHSVVLVNHRGAGEGAPFAKRPYHSGSAEDVSVVLGQLRQMFPNKKHISVGYSLSGNIMLCLLGGYGGKHKP
DGAITVNAPLNLQSGSLLLKSGFNRVYDMRFVLRLRKLVEEKHRLGLITEKYEIPKWATVWDMDQIYTAPASGFASREDY
YQRCSSIQYVSGIDVPTYTLTSADDPFVDVSDYLRAPFSKHVQLHIEKRGGHMGYLHRQSLPVGGTRWLDYYLYEALRGL
EGTLNEKVPALSPK

Sequences:

>Translated_334_residues
MQRLNLIPCAAPFWADSGHGQTLWAHFLKSAELSHFGKKFEVDLPDGDRLFCSWLEGHTNLVVSLFHGLSGDVTSDYMQR
TALICQQLGHSVVLVNHRGAGEGAPFAKRPYHSGSAEDVSVVLGQLRQMFPNKKHISVGYSLSGNIMLCLLGGYGGKHKP
DGAITVNAPLNLQSGSLLLKSGFNRVYDMRFVLRLRKLVEEKHRLGLITEKYEIPKWATVWDMDQIYTAPASGFASREDY
YQRCSSIQYVSGIDVPTYTLTSADDPFVDVSDYLRAPFSKHVQLHIEKRGGHMGYLHRQSLPVGGTRWLDYYLYEALRGL
EGTLNEKVPALSPK
>Mature_334_residues
MQRLNLIPCAAPFWADSGHGQTLWAHFLKSAELSHFGKKFEVDLPDGDRLFCSWLEGHTNLVVSLFHGLSGDVTSDYMQR
TALICQQLGHSVVLVNHRGAGEGAPFAKRPYHSGSAEDVSVVLGQLRQMFPNKKHISVGYSLSGNIMLCLLGGYGGKHKP
DGAITVNAPLNLQSGSLLLKSGFNRVYDMRFVLRLRKLVEEKHRLGLITEKYEIPKWATVWDMDQIYTAPASGFASREDY
YQRCSSIQYVSGIDVPTYTLTSADDPFVDVSDYLRAPFSKHVQLHIEKRGGHMGYLHRQSLPVGGTRWLDYYLYEALRGL
EGTLNEKVPALSPK

Specific function: Unknown

COG id: COG0429

COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]

Homologues:

Organism=Homo sapiens, GI23397663, Length=307, Percent_Identity=23.7785016286645, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI194578891, Length=300, Percent_Identity=24.6666666666667, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI1789752, Length=292, Percent_Identity=31.5068493150685, Blast_Score=125, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI17566110, Length=294, Percent_Identity=25.1700680272109, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71985405, Length=294, Percent_Identity=24.8299319727891, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6323866, Length=255, Percent_Identity=28.2352941176471, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24652003, Length=307, Percent_Identity=26.3843648208469, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI281398151, Length=307, Percent_Identity=26.3843648208469, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24581365, Length=324, Percent_Identity=24.6913580246914, Blast_Score=82, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012020
- InterPro:   IPR000073
- InterPro:   IPR000952 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 37344; Mature: 37344

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRLNLIPCAAPFWADSGHGQTLWAHFLKSAELSHFGKKFEVDLPDGDRLFCSWLEGHTN
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCHHH
LVVSLFHGLSGDVTSDYMQRTALICQQLGHSVVLVNHRGAGEGAPFAKRPYHSGSAEDVS
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHH
VVLGQLRQMFPNKKHISVGYSLSGNIMLCLLGGYGGKHKPDGAITVNAPLNLQSGSLLLK
HHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHH
SGFNRVYDMRFVLRLRKLVEEKHRLGLITEKYEIPKWATVWDMDQIYTAPASGFASREDY
HCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEECHHHHHCCCCCCCCCHHHH
YQRCSSIQYVSGIDVPTYTLTSADDPFVDVSDYLRAPFSKHVQLHIEKRGGHMGYLHRQS
HHHHCCCEEECCCCCCEEEECCCCCCCCCHHHHHCCCCCCCEEEEEEECCCEEEEEECCC
LPVGGTRWLDYYLYEALRGLEGTLNEKVPALSPK
CCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MQRLNLIPCAAPFWADSGHGQTLWAHFLKSAELSHFGKKFEVDLPDGDRLFCSWLEGHTN
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHCCHHH
LVVSLFHGLSGDVTSDYMQRTALICQQLGHSVVLVNHRGAGEGAPFAKRPYHSGSAEDVS
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHH
VVLGQLRQMFPNKKHISVGYSLSGNIMLCLLGGYGGKHKPDGAITVNAPLNLQSGSLLLK
HHHHHHHHHCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCHHH
SGFNRVYDMRFVLRLRKLVEEKHRLGLITEKYEIPKWATVWDMDQIYTAPASGFASREDY
HCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEECHHHHHCCCCCCCCCHHHH
YQRCSSIQYVSGIDVPTYTLTSADDPFVDVSDYLRAPFSKHVQLHIEKRGGHMGYLHRQS
HHHHCCCEEECCCCCCEEEECCCCCCCCCHHHHHCCCCCCCEEEEEEECCCEEEEEECCC
LPVGGTRWLDYYLYEALRGLEGTLNEKVPALSPK
CCCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]