| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522603
Identifier: 42522603
GI number: 42522603
Start: 991793
End: 993151
Strand: Direct
Name: 42522603
Synonym: Bd1046
Alternate gene names: NA
Gene position: 991793-993151 (Clockwise)
Preceding gene: 42522602
Following gene: 42522604
Centisome position: 26.22
GC content: 52.1
Gene sequence:
>1359_bases ATGAAAAAGAAACTGATTGTTGGAATGTTGGCCGCTGCAGCGGTGATGCAGGCGACAAGTCCTGCGATGGCTGAATACAG TGAAAGACGCCCGGCTCCATATCCAGAGGCTCCGCCGATGCCACCACCTCCTCCAGGTCAGTATCTTCAGGAAGGCTCTT TGGAAATCCAGAGTGTGACCCGTCGTACAGGCGGGGAGTGGTATCGCATCAGTCTGCGTCGCGCGGCTTCTTTGGAGCGT ATAGAAGTGGCGGCTTTGGCAATGCGTTTGAAAATTCATGACGCCAGTGTGATCACTGAAGATGGCCGTCGTGTATCCAT TCGTGAGTTTCGCAACACGGCGGTGTTCGGTGTGGGTTCCCGCGCGGTCTCTGAAAATCTGAACCTGCGTTCTCGTATTG TGGCTATCGATATTCTGGCTGAATCCTATGGTGGCTATGCGGATGTGCGCGTGACGGCTCTTTCCACGGACAGCCGTCCG CAACTGGTTCTGGGGAATCTGCCGCAACAGCCGGGTGGCAACGGCGGTCACAATGGTGGGCACAATGGCGGTGGCAATAA TGGTGGTCATGGTGGTGGCAACTATGCGTGCTCTCGTCGTGCCGATGTGACTCGCAGCCTGGAGCAACAGGATGTGGAAA TGGATGCTTGGTCGCGCCGAAAGAATGCAGCCAGCTACAATTCCGTGGAATACAACATGGCCGACCGGGAGCTGAAAGCA ACAGCGGCCAGAATGGTTCAGATCGCAAAAAGCAATGAAGCCAAAGAAACCAAGATGGAAAAACTGGAGGTTTTGGGCGC CCTTTACTTCCAGAAGATGAATCAGCAGTCGTACAACTCAACTCAGTACAATGCCTACTCTGAGGTGGGAAGAGCGATCT TCAGCGCCATGGAAAACGGTCTTAAACTGGCGTTGGATTGTGACATCAGAACCACGGTTCAGTTGCTGGCTCGCGGGGAT GAGTATGTAGGGAAAATGAACACTTATTCCTACAACTCGGTTCCGTACAACGCCTACAGCCGGATGGCTCAGCAGGTATA TGCTGCGGCCCCGAACTTCTATGAGCAGGAAGTTCGTCGCTTGGACAAGACCTTCATGAAGATCGATGAAGAGCTGGATG AAAACCATAGAAAGATGAATTCCTATTCATACAATTCTGTAGGGTATAATTCTTACGCCGCCATTATCCGTAAAGGTGTC GAATTGTCTCAAGGAAGCCTGCGCCGTCTGGTGCCTCATATGGGCAGCCTGCAGCGCTTTGATCTGGTGAAGCACTTTGA CGGTCGCAAGAATGCGTACTCTTACAATTCGCTTCTTTATAATCACTTTGCTGCGATGAAAGAGATCGCGGCTCGTTAA
Upstream 100 bases:
>100_bases TATACAGACGTGTCCAAACTTTCCAGATAGTGTTCCTTGAAAGCTGAAACTTAGAAATTAGAAATTTAAAATATCAATAT TTGTAAATTTGGAGATTGTT
Downstream 100 bases:
>100_bases AATGGTTTTAAGGGAATTTTGGTTCCCTTTTGACACTGGTTTTCTTGGCACAAAGTTTGGATATAGGGTCAACGGATTCA CTAATCAGTCTTTTAAGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MKKKLIVGMLAAAAVMQATSPAMAEYSERRPAPYPEAPPMPPPPPGQYLQEGSLEIQSVTRRTGGEWYRISLRRAASLER IEVAALAMRLKIHDASVITEDGRRVSIREFRNTAVFGVGSRAVSENLNLRSRIVAIDILAESYGGYADVRVTALSTDSRP QLVLGNLPQQPGGNGGHNGGHNGGGNNGGHGGGNYACSRRADVTRSLEQQDVEMDAWSRRKNAASYNSVEYNMADRELKA TAARMVQIAKSNEAKETKMEKLEVLGALYFQKMNQQSYNSTQYNAYSEVGRAIFSAMENGLKLALDCDIRTTVQLLARGD EYVGKMNTYSYNSVPYNAYSRMAQQVYAAAPNFYEQEVRRLDKTFMKIDEELDENHRKMNSYSYNSVGYNSYAAIIRKGV ELSQGSLRRLVPHMGSLQRFDLVKHFDGRKNAYSYNSLLYNHFAAMKEIAAR
Sequences:
>Translated_452_residues MKKKLIVGMLAAAAVMQATSPAMAEYSERRPAPYPEAPPMPPPPPGQYLQEGSLEIQSVTRRTGGEWYRISLRRAASLER IEVAALAMRLKIHDASVITEDGRRVSIREFRNTAVFGVGSRAVSENLNLRSRIVAIDILAESYGGYADVRVTALSTDSRP QLVLGNLPQQPGGNGGHNGGHNGGGNNGGHGGGNYACSRRADVTRSLEQQDVEMDAWSRRKNAASYNSVEYNMADRELKA TAARMVQIAKSNEAKETKMEKLEVLGALYFQKMNQQSYNSTQYNAYSEVGRAIFSAMENGLKLALDCDIRTTVQLLARGD EYVGKMNTYSYNSVPYNAYSRMAQQVYAAAPNFYEQEVRRLDKTFMKIDEELDENHRKMNSYSYNSVGYNSYAAIIRKGV ELSQGSLRRLVPHMGSLQRFDLVKHFDGRKNAYSYNSLLYNHFAAMKEIAAR >Mature_452_residues MKKKLIVGMLAAAAVMQATSPAMAEYSERRPAPYPEAPPMPPPPPGQYLQEGSLEIQSVTRRTGGEWYRISLRRAASLER IEVAALAMRLKIHDASVITEDGRRVSIREFRNTAVFGVGSRAVSENLNLRSRIVAIDILAESYGGYADVRVTALSTDSRP QLVLGNLPQQPGGNGGHNGGHNGGGNNGGHGGGNYACSRRADVTRSLEQQDVEMDAWSRRKNAASYNSVEYNMADRELKA TAARMVQIAKSNEAKETKMEKLEVLGALYFQKMNQQSYNSTQYNAYSEVGRAIFSAMENGLKLALDCDIRTTVQLLARGD EYVGKMNTYSYNSVPYNAYSRMAQQVYAAAPNFYEQEVRRLDKTFMKIDEELDENHRKMNSYSYNSVGYNSYAAIIRKGV ELSQGSLRRLVPHMGSLQRFDLVKHFDGRKNAYSYNSLLYNHFAAMKEIAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50386; Mature: 50386
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS00131 CARBOXYPEPT_SER_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKLIVGMLAAAAVMQATSPAMAEYSERRPAPYPEAPPMPPPPPGQYLQEGSLEIQSVT CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHH RRTGGEWYRISLRRAASLERIEVAALAMRLKIHDASVITEDGRRVSIREFRNTAVFGVGS HHCCCCEEEEEEHHHHHHHHHHHHHHHHHHEECCCCEEECCCCEEEHHHHCCCEEEECCC RAVSENLNLRSRIVAIDILAESYGGYADVRVTALSTDSRPQLVLGNLPQQPGGNGGHNGG HHHHCCCCHHHHEEEEEEHHHHCCCEEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCC HNGGGNNGGHGGGNYACSRRADVTRSLEQQDVEMDAWSRRKNAASYNSVEYNMADRELKA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEECCCHHHHHH TAARMVQIAKSNEAKETKMEKLEVLGALYFQKMNQQSYNSTQYNAYSEVGRAIFSAMENG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC LKLALDCDIRTTVQLLARGDEYVGKMNTYSYNSVPYNAYSRMAQQVYAAAPNFYEQEVRR CEEEEECCHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH LDKTFMKIDEELDENHRKMNSYSYNSVGYNSYAAIIRKGVELSQGSLRRLVPHMGSLQRF HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHH DLVKHFDGRKNAYSYNSLLYNHFAAMKEIAAR HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKKLIVGMLAAAAVMQATSPAMAEYSERRPAPYPEAPPMPPPPPGQYLQEGSLEIQSVT CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHH RRTGGEWYRISLRRAASLERIEVAALAMRLKIHDASVITEDGRRVSIREFRNTAVFGVGS HHCCCCEEEEEEHHHHHHHHHHHHHHHHHHEECCCCEEECCCCEEEHHHHCCCEEEECCC RAVSENLNLRSRIVAIDILAESYGGYADVRVTALSTDSRPQLVLGNLPQQPGGNGGHNGG HHHHCCCCHHHHEEEEEEHHHHCCCEEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCC HNGGGNNGGHGGGNYACSRRADVTRSLEQQDVEMDAWSRRKNAASYNSVEYNMADRELKA CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCEEECCCHHHHHH TAARMVQIAKSNEAKETKMEKLEVLGALYFQKMNQQSYNSTQYNAYSEVGRAIFSAMENG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC LKLALDCDIRTTVQLLARGDEYVGKMNTYSYNSVPYNAYSRMAQQVYAAAPNFYEQEVRR CEEEEECCHHHHHHHHHCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH LDKTFMKIDEELDENHRKMNSYSYNSVGYNSYAAIIRKGVELSQGSLRRLVPHMGSLQRF HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHH DLVKHFDGRKNAYSYNSLLYNHFAAMKEIAAR HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA