Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522602

Identifier: 42522602

GI number: 42522602

Start: 990129

End: 991673

Strand: Direct

Name: 42522602

Synonym: Bd1045

Alternate gene names: NA

Gene position: 990129-991673 (Clockwise)

Preceding gene: 42522601

Following gene: 42522603

Centisome position: 26.17

GC content: 52.1

Gene sequence:

>1545_bases
ATGAAACGTCGGTTGATTGCCACTGTGCTTGCGACACTTTCCATGATGCAAAATGCTCATGCAGATATTATTTCGGACCT
GCCGGGCTTTGATGATGTCGGCGGCGGCATGGAATTCCCGCAGCCACCACAAGAGCAAGGGGCAGATACAACGACTACGA
CGACGTCTTCAACTGCCACGTCCACGGTGCAGCGCCAGTACACGGGCGACGTTCAGGTGCGCGAAGTTTCCCGTAAGAAA
GACGGTGAGATCCGTAAGATCACTCTGGCAGAGGCTTTGACCTTGCAAAATATGGAAATCAAAGCCCGTAATGCCCGCGT
GAAAATTCACGAAGTGACTTTGATTCTGGCAAATGGCCAGCGCTCGGATGTTCGCGAGTACCGTAACGCCGCTGTTTTGG
AAATCAACGCCACGGCGTCTTCCGGCAATCTGAATTTGAATCAAAAAGTGGCGGCTATCGAAATCCGCGCGGAATCCTAC
GGTGGTATCAGTGAATTGAGCGTGAAAGCGGTTTCTGATCTGGGTGTGCCACGTATGACGGCGCAGGGGCCGGCAGTCGC
GCAACCAGTGACTCCGACCGCTCCTCCGGCTCCGGGCCGCACTGAAGAATCCGCGACTGTTCGTGTGGGCGATAAAGTTC
TTTTTGATAATGGCAGCAGCTATGTCGGCACAGTGAAAGAGATCTTCATGTCCGGCAAAGCCCGCGTGAGCTTCCCGGGG
TACAGCCAGGATTCCATTTTGGATTTGAAGGACCTTGCACGCTCGGTGAACTGCCAGGCCACCCAGTGTGTCGGTGACCG
CGTTCTGTTCGACAATGGAAATCAGTATGTTGGCATGATCAGCATGGTGTTTGCCAACGGTGTTCGTCAGGTGAAGTTCC
CAGGCTACAGCGAGCCATCTTTCATTAAAGCACAAAAGCTGACTAAGTCCGCGCAGTGTGCAGGCTCTGTGTGTGTGGGT
GAAAGAATCATCTTTAGCAACGGCAGCGATTATTATGCCGGCACTGTGCGCGAGGCATTCGTAAACGGGATGGTTTCCAT
CAAGTTTGATGGTTATAACGAAATTAGCTTCCTGGATCACAAGAAGTTGATGAAAGGGCAGGCCTGCGCCAGCGATATCT
GCGTGGATACGCGAGTCATGTTCGATAATGGCAGCGGAAATTATCTGGGCCGTGTCACTGAAATTTATGCTGATGGCACC
GCGAAAATCAAATTTGAAGGTTACAGTGAATACAGCTTCATCAAGACTTCGCGCCTTGTAAAGGTGGTGTCTTCCGTGAA
GGGTTACAGCAGCGGCACTCGCGTGCTGTTCAATAACGGTTCCGGCTACTATGTCGGTACCGTGCGTGAGGTGTTCGCTG
ATGGCACAGCCTCCATCAAATTTGAAGGTTACAGTGACCTGAGCTTTATCAAAGTGGATCGCTTGGGACGTCAGGCGGAT
TGTCATAAAAACATCTGCACCGGAAACCGGGTGATCCTTAACGGTCAGTACTCGGGGACTGTTCGTGCGGTCTATAGCAA
TGGGTACGCTCTGGTGAAATACTGA

Upstream 100 bases:

>100_bases
TTGACCAGCTTTATATCAAATTTATCTGTGTTTGAGGCCGCCCGCAGGCGGCACGAACCTTGGATTACTGCCTGCGGAAC
CAAAACAGTATGGAGTCTTT

Downstream 100 bases:

>100_bases
CGGATACACGGACCTGACCTATACAGACGTGTCCAAACTTTCCAGATAGTGTTCCTTGAAAGCTGAAACTTAGAAATTAG
AAATTTAAAATATCAATATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MKRRLIATVLATLSMMQNAHADIISDLPGFDDVGGGMEFPQPPQEQGADTTTTTTSSTATSTVQRQYTGDVQVREVSRKK
DGEIRKITLAEALTLQNMEIKARNARVKIHEVTLILANGQRSDVREYRNAAVLEINATASSGNLNLNQKVAAIEIRAESY
GGISELSVKAVSDLGVPRMTAQGPAVAQPVTPTAPPAPGRTEESATVRVGDKVLFDNGSSYVGTVKEIFMSGKARVSFPG
YSQDSILDLKDLARSVNCQATQCVGDRVLFDNGNQYVGMISMVFANGVRQVKFPGYSEPSFIKAQKLTKSAQCAGSVCVG
ERIIFSNGSDYYAGTVREAFVNGMVSIKFDGYNEISFLDHKKLMKGQACASDICVDTRVMFDNGSGNYLGRVTEIYADGT
AKIKFEGYSEYSFIKTSRLVKVVSSVKGYSSGTRVLFNNGSGYYVGTVREVFADGTASIKFEGYSDLSFIKVDRLGRQAD
CHKNICTGNRVILNGQYSGTVRAVYSNGYALVKY

Sequences:

>Translated_514_residues
MKRRLIATVLATLSMMQNAHADIISDLPGFDDVGGGMEFPQPPQEQGADTTTTTTSSTATSTVQRQYTGDVQVREVSRKK
DGEIRKITLAEALTLQNMEIKARNARVKIHEVTLILANGQRSDVREYRNAAVLEINATASSGNLNLNQKVAAIEIRAESY
GGISELSVKAVSDLGVPRMTAQGPAVAQPVTPTAPPAPGRTEESATVRVGDKVLFDNGSSYVGTVKEIFMSGKARVSFPG
YSQDSILDLKDLARSVNCQATQCVGDRVLFDNGNQYVGMISMVFANGVRQVKFPGYSEPSFIKAQKLTKSAQCAGSVCVG
ERIIFSNGSDYYAGTVREAFVNGMVSIKFDGYNEISFLDHKKLMKGQACASDICVDTRVMFDNGSGNYLGRVTEIYADGT
AKIKFEGYSEYSFIKTSRLVKVVSSVKGYSSGTRVLFNNGSGYYVGTVREVFADGTASIKFEGYSDLSFIKVDRLGRQAD
CHKNICTGNRVILNGQYSGTVRAVYSNGYALVKY
>Mature_514_residues
MKRRLIATVLATLSMMQNAHADIISDLPGFDDVGGGMEFPQPPQEQGADTTTTTTSSTATSTVQRQYTGDVQVREVSRKK
DGEIRKITLAEALTLQNMEIKARNARVKIHEVTLILANGQRSDVREYRNAAVLEINATASSGNLNLNQKVAAIEIRAESY
GGISELSVKAVSDLGVPRMTAQGPAVAQPVTPTAPPAPGRTEESATVRVGDKVLFDNGSSYVGTVKEIFMSGKARVSFPG
YSQDSILDLKDLARSVNCQATQCVGDRVLFDNGNQYVGMISMVFANGVRQVKFPGYSEPSFIKAQKLTKSAQCAGSVCVG
ERIIFSNGSDYYAGTVREAFVNGMVSIKFDGYNEISFLDHKKLMKGQACASDICVDTRVMFDNGSGNYLGRVTEIYADGT
AKIKFEGYSEYSFIKTSRLVKVVSSVKGYSSGTRVLFNNGSGYYVGTVREVFADGTASIKFEGYSDLSFIKVDRLGRQAD
CHKNICTGNRVILNGQYSGTVRAVYSNGYALVKY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55698; Mature: 55698

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS00131 CARBOXYPEPT_SER_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRLIATVLATLSMMQNAHADIISDLPGFDDVGGGMEFPQPPQEQGADTTTTTTSSTAT
CCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCHHH
STVQRQYTGDVQVREVSRKKDGEIRKITLAEALTLQNMEIKARNARVKIHEVTLILANGQ
HHHHHHCCCCEEEEEHHCCCCCCEEEEEEHHHHEECCEEEEECCCEEEEEEEEEEEECCC
RSDVREYRNAAVLEINATASSGNLNLNQKVAAIEIRAESYGGISELSVKAVSDLGVPRMT
HHHHHHHCCEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCC
AQGPAVAQPVTPTAPPAPGRTEESATVRVGDKVLFDNGSSYVGTVKEIFMSGKARVSFPG
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHCCCCEEECCC
YSQDSILDLKDLARSVNCQATQCVGDRVLFDNGNQYVGMISMVFANGVRQVKFPGYSEPS
CCCCCCCCHHHHHHHCCCCEEECCCCEEEEECCCCEEHHHHHHHHCCCEEEECCCCCCCC
FIKAQKLTKSAQCAGSVCVGERIIFSNGSDYYAGTVREAFVNGMVSIKFDGYNEISFLDH
HHHHHHHHHHHHHCCCEEECCEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHH
KKLMKGQACASDICVDTRVMFDNGSGNYLGRVTEIYADGTAKIKFEGYSEYSFIKTSRLV
HHHHCCCCCHHHCEEEEEEEEECCCCCEEEEEEEEEECCEEEEEECCCCCCHHHHHHHHH
KVVSSVKGYSSGTRVLFNNGSGYYVGTVREVFADGTASIKFEGYSDLSFIKVDRLGRQAD
HHHHHHCCCCCCCEEEEECCCEEEEEEHHHHHCCCCEEEEECCCCCCEEEEEHHCCCCCC
CHKNICTGNRVILNGQYSGTVRAVYSNGYALVKY
CCCCCCCCCEEEEECCCCCEEEEEEECCEEEEEC
>Mature Secondary Structure
MKRRLIATVLATLSMMQNAHADIISDLPGFDDVGGGMEFPQPPQEQGADTTTTTTSSTAT
CCHHHHHHHHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCEECCCCHHH
STVQRQYTGDVQVREVSRKKDGEIRKITLAEALTLQNMEIKARNARVKIHEVTLILANGQ
HHHHHHCCCCEEEEEHHCCCCCCEEEEEEHHHHEECCEEEEECCCEEEEEEEEEEEECCC
RSDVREYRNAAVLEINATASSGNLNLNQKVAAIEIRAESYGGISELSVKAVSDLGVPRMT
HHHHHHHCCEEEEEEEEECCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHCCCCCCC
AQGPAVAQPVTPTAPPAPGRTEESATVRVGDKVLFDNGSSYVGTVKEIFMSGKARVSFPG
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCHHHHHHHHHHCCCCEEECCC
YSQDSILDLKDLARSVNCQATQCVGDRVLFDNGNQYVGMISMVFANGVRQVKFPGYSEPS
CCCCCCCCHHHHHHHCCCCEEECCCCEEEEECCCCEEHHHHHHHHCCCEEEECCCCCCCC
FIKAQKLTKSAQCAGSVCVGERIIFSNGSDYYAGTVREAFVNGMVSIKFDGYNEISFLDH
HHHHHHHHHHHHHCCCEEECCEEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHH
KKLMKGQACASDICVDTRVMFDNGSGNYLGRVTEIYADGTAKIKFEGYSEYSFIKTSRLV
HHHHCCCCCHHHCEEEEEEEEECCCCCEEEEEEEEEECCEEEEEECCCCCCHHHHHHHHH
KVVSSVKGYSSGTRVLFNNGSGYYVGTVREVFADGTASIKFEGYSDLSFIKVDRLGRQAD
HHHHHHCCCCCCCEEEEECCCEEEEEEHHHHHCCCCEEEEECCCCCCEEEEEHHCCCCCC
CHKNICTGNRVILNGQYSGTVRAVYSNGYALVKY
CCCCCCCCCEEEEECCCCCEEEEEEECCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA