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The map label for this gene is omp [H]

Identifier: 42522604

GI number: 42522604

Start: 993257

End: 994222

Strand: Direct

Name: omp [H]

Synonym: Bd1047

Alternate gene names: 42522604

Gene position: 993257-994222 (Clockwise)

Preceding gene: 42522603

Following gene: 42522605

Centisome position: 26.26

GC content: 53.52

Gene sequence:

>966_bases
ATGAAAAAGAACCTCGTTCTAGGATCAGTAATTGTCGCTTCCCTTGTACAATATACAAGCCCTGCATTTGCGAACAAGGA
AGTTATCGGCGGTATCATTGGTGGTATCATCGGTGGCGGTATCGGTACGCAAATTGGTAAAGGGAACGGCAACAAAGCAG
CTATCATCATCGGAGCTGTAGCTGGAACATTGATTGGCTCTAAAGTCGGCAAGGACTTGGATGAAGCTGATCGTCAGGCT
CTGGCAGAAGCACAAAGACGTTCTTTGCAGGACAACCTGGGCAGCCGTCGCGACTGGGATGGTCGTCATTATGGTTCGCG
CACTGGTGCACGTGGCAGCTTCACTTCCACTCGTGAAGGTTACAACAACCGCACGGGCGAATACTGCCGTGAATACACCT
CTATCATCTATATGCGTGACCGCACTGAAGAAACCCGCGGCTATGCGTGCTCCCGCCGTGATGGATCCTGGTATGAAGTG
AAAGAAACCGAAGTTCGTTTCAATGGTCGTGGTCATGGTGGCGGCCGTCACAATGAACCACCAGTAAGACCTTCCCAGCC
GGTTCGCCCAACTCCTCCTCCAGCTCCGGGCGGTCAGTATGGTCACGGTTATGAAGGCACGGCTCAGATCAGCCAGATCA
CCCGCCGCACCGGTGGTGAGTGGTTCCGTGTGACCTTGCGCTACCCAATTGCCTTGGATCGTATCGAGATCCGTGGTTTG
GCTGCAGGTGTTAAAATCCACGACACGACTGTTTACACTGAGTCCAACCGTCGCATCCAGGTTCGTGAACTGACCAACAC
GGGTACGGTTTATGCCGGTGACACAGCAATTTCCGAGAACTTGAACCTGCGTGAGCGCGTTCAGGTCATCGACATCCGTG
CTGAGTCCATGGGGGGCGTTGCCGACGTACTTGTGAAGGCGATTTCCAGTGAAGATCGTCCTTCCCTGACCGTCAGCCGT
TACTAA

Upstream 100 bases:

>100_bases
TTTTAAGGGAATTTTGGTTCCCTTTTGACACTGGTTTTCTTGGCACAAAGTTTGGATATAGGGTCAACGGATTCACTAAT
CAGTCTTTTAAGGAGACTTT

Downstream 100 bases:

>100_bases
AAAACATCAGTGCCGCCCAAGGTGGCGCTGAGAGCGGAAATTTTAAGTAATTTTCACTAAAAGCCAGTCTATGACTAACA
GTGTCTAGACTGGCTTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MKKNLVLGSVIVASLVQYTSPAFANKEVIGGIIGGIIGGGIGTQIGKGNGNKAAIIIGAVAGTLIGSKVGKDLDEADRQA
LAEAQRRSLQDNLGSRRDWDGRHYGSRTGARGSFTSTREGYNNRTGEYCREYTSIIYMRDRTEETRGYACSRRDGSWYEV
KETEVRFNGRGHGGGRHNEPPVRPSQPVRPTPPPAPGGQYGHGYEGTAQISQITRRTGGEWFRVTLRYPIALDRIEIRGL
AAGVKIHDTTVYTESNRRIQVRELTNTGTVYAGDTAISENLNLRERVQVIDIRAESMGGVADVLVKAISSEDRPSLTVSR
Y

Sequences:

>Translated_321_residues
MKKNLVLGSVIVASLVQYTSPAFANKEVIGGIIGGIIGGGIGTQIGKGNGNKAAIIIGAVAGTLIGSKVGKDLDEADRQA
LAEAQRRSLQDNLGSRRDWDGRHYGSRTGARGSFTSTREGYNNRTGEYCREYTSIIYMRDRTEETRGYACSRRDGSWYEV
KETEVRFNGRGHGGGRHNEPPVRPSQPVRPTPPPAPGGQYGHGYEGTAQISQITRRTGGEWFRVTLRYPIALDRIEIRGL
AAGVKIHDTTVYTESNRRIQVRELTNTGTVYAGDTAISENLNLRERVQVIDIRAESMGGVADVLVKAISSEDRPSLTVSR
Y
>Mature_321_residues
MKKNLVLGSVIVASLVQYTSPAFANKEVIGGIIGGIIGGGIGTQIGKGNGNKAAIIIGAVAGTLIGSKVGKDLDEADRQA
LAEAQRRSLQDNLGSRRDWDGRHYGSRTGARGSFTSTREGYNNRTGEYCREYTSIIYMRDRTEETRGYACSRRDGSWYEV
KETEVRFNGRGHGGGRHNEPPVRPSQPVRPTPPPAPGGQYGHGYEGTAQISQITRRTGGEWFRVTLRYPIALDRIEIRGL
AAGVKIHDTTVYTESNRRIQVRELTNTGTVYAGDTAISENLNLRERVQVIDIRAESMGGVADVLVKAISSEDRPSLTVSR
Y

Specific function: Unknown

COG id: COG4520

COG function: function code M; Surface antigen

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rickettsiale 17 kDa surface antigen family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008816
- InterPro:   IPR016364 [H]

Pfam domain/function: PF05433 Rick_17kDa_Anti [H]

EC number: NA

Molecular weight: Translated: 35029; Mature: 35029

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKNLVLGSVIVASLVQYTSPAFANKEVIGGIIGGIIGGGIGTQIGKGNGNKAAIIIGAV
CCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHH
AGTLIGSKVGKDLDEADRQALAEAQRRSLQDNLGSRRDWDGRHYGSRTGARGSFTSTREG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YNNRTGEYCREYTSIIYMRDRTEETRGYACSRRDGSWYEVKETEVRFNGRGHGGGRHNEP
CCCCHHHHHHHHHHEEEEECCCCHHCCCEEECCCCCEEEEEEEEEEECCCCCCCCCCCCC
PVRPSQPVRPTPPPAPGGQYGHGYEGTAQISQITRRTGGEWFRVTLRYPIALDRIEIRGL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCEEECEEEEEEE
AAGVKIHDTTVYTESNRRIQVRELTNTGTVYAGDTAISENLNLRERVQVIDIRAESMGGV
EECCEEECEEEEECCCCEEEEEEECCCCCEEECCCHHCCCCCHHHHEEEEEEEHHHCCCH
ADVLVKAISSEDRPSLTVSRY
HHHHHHHHCCCCCCCEEEECC
>Mature Secondary Structure
MKKNLVLGSVIVASLVQYTSPAFANKEVIGGIIGGIIGGGIGTQIGKGNGNKAAIIIGAV
CCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHH
AGTLIGSKVGKDLDEADRQALAEAQRRSLQDNLGSRRDWDGRHYGSRTGARGSFTSTREG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
YNNRTGEYCREYTSIIYMRDRTEETRGYACSRRDGSWYEVKETEVRFNGRGHGGGRHNEP
CCCCHHHHHHHHHHEEEEECCCCHHCCCEEECCCCCEEEEEEEEEEECCCCCCCCCCCCC
PVRPSQPVRPTPPPAPGGQYGHGYEGTAQISQITRRTGGEWFRVTLRYPIALDRIEIRGL
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCEEECEEEEEEE
AAGVKIHDTTVYTESNRRIQVRELTNTGTVYAGDTAISENLNLRERVQVIDIRAESMGGV
EECCEEECEEEEECCCCEEEEEEECCCCCEEECCCHHCCCCCHHHHEEEEEEEHHHCCCH
ADVLVKAISSEDRPSLTVSRY
HHHHHHHHCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA