| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is phoU [H]
Identifier: 42522576
GI number: 42522576
Start: 964596
End: 965270
Strand: Direct
Name: phoU [H]
Synonym: Bd1016
Alternate gene names: 42522576
Gene position: 964596-965270 (Clockwise)
Preceding gene: 42522575
Following gene: 42522577
Centisome position: 25.5
GC content: 49.78
Gene sequence:
>675_bases GTGGATACCATGGAAAGAGCGATAGATATTCAACTGGAAGACCTGAAAAAAATGATTCTTCTGATGGGTGGCCATGTTGA AAAATCTCTGGCTCAGGTGACCGCGGCTTTGTTGTCCCGTGACGTCGACATGTTCAGCGGTGTTCATGACATCGAAAAAC TGATCAATGAAGACCACATCCGCGTGGACAACGCCTGCATGCACGTACTGGCAAAGCAGGGCCCGGTGGCCAAAGACCTG CGTTTGATCATTTCCGTTCTTAAGATCAACAACGATCTGGAGCGCATGGGTGATCAGACAGTGAATATTTCTTACTCCGG TAAGGATTATCTTGGGCGCAAACCCATCCAGCAGCAGTTGAGCGACATTCAGAAAATGTCTGAAATCGCCGGCCGCATGG TGAAGGGCTCTTTGGACAGCTTCGTCCGTGGTGACGTTGAGCAGGCCAAAAAGATCCTGTTGATGGATGACGAAATCGAC GCTCTGAAAAACAAGGTTTTCCAGGACGCGATGGCGCACATGAAAGCCCACTCGGATGATGTGGAAGCGGGCATGGATTT GATTTTGATTGCAAGAAATCTGGAACGTCTTGGAGATCACGCGACGAATATCGCAGAAGACGTGATCTTTGCCTTTACCG GCAAGGACGTCCGACACGGAGGAAAGTTTGGCTGA
Upstream 100 bases:
>100_bases GTTCTAGAGTGTGTTAAGTTTCTGTTAGAATCACTAGAGATGCCGTGTTAAGCGGTGTCTTTATTTTTCAAATCATTATA AATCAAGCCAAGCGCTAAAG
Downstream 100 bases:
>100_bases TAATTCAGTTCATGTGCTAGTGGTGGAAGATGAGCAGGAAATCCGGGAGCTGATGGCTCTGCACCTGCTTCGTCAAGGGT ACCGAGTGACCGAATGTGCT
Product: phosphate transport system regulatory protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MDTMERAIDIQLEDLKKMILLMGGHVEKSLAQVTAALLSRDVDMFSGVHDIEKLINEDHIRVDNACMHVLAKQGPVAKDL RLIISVLKINNDLERMGDQTVNISYSGKDYLGRKPIQQQLSDIQKMSEIAGRMVKGSLDSFVRGDVEQAKKILLMDDEID ALKNKVFQDAMAHMKAHSDDVEAGMDLILIARNLERLGDHATNIAEDVIFAFTGKDVRHGGKFG
Sequences:
>Translated_224_residues MDTMERAIDIQLEDLKKMILLMGGHVEKSLAQVTAALLSRDVDMFSGVHDIEKLINEDHIRVDNACMHVLAKQGPVAKDL RLIISVLKINNDLERMGDQTVNISYSGKDYLGRKPIQQQLSDIQKMSEIAGRMVKGSLDSFVRGDVEQAKKILLMDDEID ALKNKVFQDAMAHMKAHSDDVEAGMDLILIARNLERLGDHATNIAEDVIFAFTGKDVRHGGKFG >Mature_224_residues MDTMERAIDIQLEDLKKMILLMGGHVEKSLAQVTAALLSRDVDMFSGVHDIEKLINEDHIRVDNACMHVLAKQGPVAKDL RLIISVLKINNDLERMGDQTVNISYSGKDYLGRKPIQQQLSDIQKMSEIAGRMVKGSLDSFVRGDVEQAKKILLMDDEID ALKNKVFQDAMAHMKAHSDDVEAGMDLILIARNLERLGDHATNIAEDVIFAFTGKDVRHGGKFG
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=211, Percent_Identity=28.9099526066351, Blast_Score=110, Evalue=9e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 24968; Mature: 24968
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 5.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTMERAIDIQLEDLKKMILLMGGHVEKSLAQVTAALLSRDVDMFSGVHDIEKLINEDHI CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC RVDNACMHVLAKQGPVAKDLRLIISVLKINNDLERMGDQTVNISYSGKDYLGRKPIQQQL CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHCCCCEEEEEECCCHHCCCCHHHHHH SDIQKMSEIAGRMVKGSLDSFVRGDVEQAKKILLMDDEIDALKNKVFQDAMAHMKAHSDD HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH VEAGMDLILIARNLERLGDHATNIAEDVIFAFTGKDVRHGGKFG HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC >Mature Secondary Structure MDTMERAIDIQLEDLKKMILLMGGHVEKSLAQVTAALLSRDVDMFSGVHDIEKLINEDHI CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCC RVDNACMHVLAKQGPVAKDLRLIISVLKINNDLERMGDQTVNISYSGKDYLGRKPIQQQL CHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHCCCCEEEEEECCCHHCCCCHHHHHH SDIQKMSEIAGRMVKGSLDSFVRGDVEQAKKILLMDDEIDALKNKVFQDAMAHMKAHSDD HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCH VEAGMDLILIARNLERLGDHATNIAEDVIFAFTGKDVRHGGKFG HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA