Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522575

Identifier: 42522575

GI number: 42522575

Start: 963438

End: 964502

Strand: Direct

Name: 42522575

Synonym: Bd1015

Alternate gene names: NA

Gene position: 963438-964502 (Clockwise)

Preceding gene: 42522571

Following gene: 42522576

Centisome position: 25.47

GC content: 53.8

Gene sequence:

>1065_bases
ATGAGAGACATGAAAAAAATCGTTCTTGGCTCTTTATTTTCACTTTTTGCGTCCACGCAGGCTTTGGCTCTTTCTGAGAT
CGAACTGACCGGCGAGTTGGACGCTACGGCCTCTGTCTGGAATCTGCCGACGGGTGAACGCGGGAACTCGGCTTTTGCAG
TTCCGTCCCTTTTTTTAAACCTTCATATCCCCCTGCAAGAGGACAACCTTTTGGTTGTGACAATGGAAGGATCCGAACAA
AAGGACATCAGTCCCAATCGCTTTGATGTCGGAGTTCGCGAGGCCTACTTGGATCTGGTCAGTTTCTTTGAAGGCATGAA
CGCGTTGCGCGCCGGCTTGATTCCACAAACCTGGCAAGAGGCTCAATACGAGAACTATCAATATCGTTTCCTAGGGCAGA
CCGCCTGGTCTATGACGGAAAAGTGGAAGTACCTGTCTTATTCCGATTTGGGCGTGTCCTTCATGTCCCAGCTCCCGCAT
GACTATGGCGAGTGGGCTTTGAACCTCACCAACGGGGAAGGGGCCGAGGAAAAAGAGGAAGGCCCGCACAAAGAGTTCAC
ACTTTTTGCCCGGTTCTTTAAGTGGTCCCCTTGGTCTTTGAATTTGAGTTATGTCCGTGGAAGTTACGATCTTTATGGTG
CCGACGTGGGCCTGAAGGAACGCATCCAGGGGCTTTTGGCCTACGAAAAAGAAGACGAGTGGATGGTGGCTTTGGAGTAC
CTCGCCACCAAGGACCCGGCCGACGCCCTTCGCGATTATGAGATGGCGGACGGGGTGGATGTGACGGCGCTCAGCGGCCA
GTCCGTCCGGGGCGAGGGTGCCAGTCTTTACGCTGTGGTGCATACAGGGCCTAAGGCGGAGATTTTGGTGCGTTATGATT
ATCTGAACCCTGTCGTTGGTGAGGACGGCAAGGATTTGCAGACCGCGATTCTTGCTTTGGGCTATCAAGTGACGGATGAT
ATTAAGGCGGCCTTGGCGGTTGATCACACCAAATACGGTGAGGAATTCGCCCCCGGGGCCCGCGAGCGATCCAAGCTGGA
GCTGGCCGCTCAGGTCCTGTTCTAG

Upstream 100 bases:

>100_bases
AATCATCATACGAATGGCGTTGGACCCGATATCGATGGCGGATATACGACGTGACACGTAAAGCTCCCTTTCCTTGGCAA
CAGTATATAAAGATGGCAGC

Downstream 100 bases:

>100_bases
AGTGTGTTAAGTTTCTGTTAGAATCACTAGAGATGCCGTGTTAAGCGGTGTCTTTATTTTTCAAATCATTATAAATCAAG
CCAAGCGCTAAAGGTGGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MRDMKKIVLGSLFSLFASTQALALSEIELTGELDATASVWNLPTGERGNSAFAVPSLFLNLHIPLQEDNLLVVTMEGSEQ
KDISPNRFDVGVREAYLDLVSFFEGMNALRAGLIPQTWQEAQYENYQYRFLGQTAWSMTEKWKYLSYSDLGVSFMSQLPH
DYGEWALNLTNGEGAEEKEEGPHKEFTLFARFFKWSPWSLNLSYVRGSYDLYGADVGLKERIQGLLAYEKEDEWMVALEY
LATKDPADALRDYEMADGVDVTALSGQSVRGEGASLYAVVHTGPKAEILVRYDYLNPVVGEDGKDLQTAILALGYQVTDD
IKAALAVDHTKYGEEFAPGARERSKLELAAQVLF

Sequences:

>Translated_354_residues
MRDMKKIVLGSLFSLFASTQALALSEIELTGELDATASVWNLPTGERGNSAFAVPSLFLNLHIPLQEDNLLVVTMEGSEQ
KDISPNRFDVGVREAYLDLVSFFEGMNALRAGLIPQTWQEAQYENYQYRFLGQTAWSMTEKWKYLSYSDLGVSFMSQLPH
DYGEWALNLTNGEGAEEKEEGPHKEFTLFARFFKWSPWSLNLSYVRGSYDLYGADVGLKERIQGLLAYEKEDEWMVALEY
LATKDPADALRDYEMADGVDVTALSGQSVRGEGASLYAVVHTGPKAEILVRYDYLNPVVGEDGKDLQTAILALGYQVTDD
IKAALAVDHTKYGEEFAPGARERSKLELAAQVLF
>Mature_354_residues
MRDMKKIVLGSLFSLFASTQALALSEIELTGELDATASVWNLPTGERGNSAFAVPSLFLNLHIPLQEDNLLVVTMEGSEQ
KDISPNRFDVGVREAYLDLVSFFEGMNALRAGLIPQTWQEAQYENYQYRFLGQTAWSMTEKWKYLSYSDLGVSFMSQLPH
DYGEWALNLTNGEGAEEKEEGPHKEFTLFARFFKWSPWSLNLSYVRGSYDLYGADVGLKERIQGLLAYEKEDEWMVALEY
LATKDPADALRDYEMADGVDVTALSGQSVRGEGASLYAVVHTGPKAEILVRYDYLNPVVGEDGKDLQTAILALGYQVTDD
IKAALAVDHTKYGEEFAPGARERSKLELAAQVLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39600; Mature: 39600

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDMKKIVLGSLFSLFASTQALALSEIELTGELDATASVWNLPTGERGNSAFAVPSLFLN
CCHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCEECCCCCCCCCCEEEEEEEEEE
LHIPLQEDNLLVVTMEGSEQKDISPNRFDVGVREAYLDLVSFFEGMNALRAGLIPQTWQE
EEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
AQYENYQYRFLGQTAWSMTEKWKYLSYSDLGVSFMSQLPHDYGEWALNLTNGEGAEEKEE
HHCCCEEEEEECCHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHC
GPHKEFTLFARFFKWSPWSLNLSYVRGSYDLYGADVGLKERIQGLLAYEKEDEWMVALEY
CCCHHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEHH
LATKDPADALRDYEMADGVDVTALSGQSVRGEGASLYAVVHTGPKAEILVRYDYLNPVVG
HHCCCHHHHHHCCHHCCCCEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCC
EDGKDLQTAILALGYQVTDDIKAALAVDHTKYGEEFAPGARERSKLELAAQVLF
CCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHCCHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MRDMKKIVLGSLFSLFASTQALALSEIELTGELDATASVWNLPTGERGNSAFAVPSLFLN
CCHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCEECCCCCCCCCCEEEEEEEEEE
LHIPLQEDNLLVVTMEGSEQKDISPNRFDVGVREAYLDLVSFFEGMNALRAGLIPQTWQE
EEEEECCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
AQYENYQYRFLGQTAWSMTEKWKYLSYSDLGVSFMSQLPHDYGEWALNLTNGEGAEEKEE
HHCCCEEEEEECCHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHC
GPHKEFTLFARFFKWSPWSLNLSYVRGSYDLYGADVGLKERIQGLLAYEKEDEWMVALEY
CCCHHHHHHHHHHCCCCCEEEEEEEECCCEEEECCCCHHHHHHHHHHCCCCCCCEEEEHH
LATKDPADALRDYEMADGVDVTALSGQSVRGEGASLYAVVHTGPKAEILVRYDYLNPVVG
HHCCCHHHHHHCCHHCCCCEEEEECCCCCCCCCCEEEEEEECCCCEEEEEEEECCCCCCC
EDGKDLQTAILALGYQVTDDIKAALAVDHTKYGEEFAPGARERSKLELAAQVLF
CCCCHHHHHHHHHCCHHHHHHHHHHHCCCHHCCHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA