| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522386
Identifier: 42522386
GI number: 42522386
Start: 760366
End: 760731
Strand: Direct
Name: 42522386
Synonym: Bd0810
Alternate gene names: NA
Gene position: 760366-760731 (Clockwise)
Preceding gene: 42522385
Following gene: 42522387
Centisome position: 20.1
GC content: 47.54
Gene sequence:
>366_bases ATGTCCCTAAAGAAGTCATTGTTAGTTTTTGTAATGGGTGTGTTTGTTGTTTTGGCGGGTATGATCAGTCCAGCCAAGGC TGCTGAAGCATTGGAGATCGTGCCGAATCAAAAAGTCTGCATGGTGACCAATATGGTTTTTCCACGCGATCAGATTCCGG TAAAGCAGGGTGGTAAAACTTATTATGGCTGCTGCGAAAACTGCAAAAAGACCCTGGCTGAAGACGCGAACGCCCGTACA GCGATCGACCCGGTATCAGGTAAGTCCGTCGACAAAGCGACAGCGGTGATTGCCGCTCGTGCCGATGGTTCCGTGGTTTA TTTCCAGAATAAAAAGAACTTCGAAAAATTCCGCGCGCGTAAATAA
Upstream 100 bases:
>100_bases GCGCGCCAAAGTTCGTTAATTTGTGAGGCCGCCTTTGGTTGTCACAAAAGGCGGCTTTGATTCCTAATACCTGAAAACAG GCAAAACGCAGGAGTCTGAT
Downstream 100 bases:
>100_bases TTTCCAGGAGATCCCGTGACCCATTCCTTTACACAAAAGGCAGATATCAAGATTGTCGGCATTTCAGTTCGCACCAGCAA CGGCGCTGAAATGAAGGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSLKKSLLVFVMGVFVVLAGMISPAKAAEALEIVPNQKVCMVTNMVFPRDQIPVKQGGKTYYGCCENCKKTLAEDANART AIDPVSGKSVDKATAVIAARADGSVVYFQNKKNFEKFRARK
Sequences:
>Translated_121_residues MSLKKSLLVFVMGVFVVLAGMISPAKAAEALEIVPNQKVCMVTNMVFPRDQIPVKQGGKTYYGCCENCKKTLAEDANART AIDPVSGKSVDKATAVIAARADGSVVYFQNKKNFEKFRARK >Mature_120_residues SLKKSLLVFVMGVFVVLAGMISPAKAAEALEIVPNQKVCMVTNMVFPRDQIPVKQGGKTYYGCCENCKKTLAEDANARTA IDPVSGKSVDKATAVIAARADGSVVYFQNKKNFEKFRARK
Specific function: Unknown
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13164; Mature: 13032
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKKSLLVFVMGVFVVLAGMISPAKAAEALEIVPNQKVCMVTNMVFPRDQIPVKQGGKT CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCE YYGCCENCKKTLAEDANARTAIDPVSGKSVDKATAVIAARADGSVVYFQNKKNFEKFRAR EHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHEEEEECCCCCEEEEECCCCHHHHHCC K C >Mature Secondary Structure SLKKSLLVFVMGVFVVLAGMISPAKAAEALEIVPNQKVCMVTNMVFPRDQIPVKQGGKT CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCE YYGCCENCKKTLAEDANARTAIDPVSGKSVDKATAVIAARADGSVVYFQNKKNFEKFRAR EHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHEEEEECCCCCEEEEECCCCHHHHHCC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA