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The map label for this gene is araC [H]

Identifier: 42522387

GI number: 42522387

Start: 760747

End: 761232

Strand: Direct

Name: araC [H]

Synonym: Bd0811

Alternate gene names: 42522387

Gene position: 760747-761232 (Clockwise)

Preceding gene: 42522386

Following gene: 42522391

Centisome position: 20.11

GC content: 50.62

Gene sequence:

>486_bases
GTGACCCATTCCTTTACACAAAAGGCAGATATCAAGATTGTCGGCATTTCAGTTCGCACCAGCAACGGCGCTGAAATGAA
GGGAAGTGGCAAGATCGGGGCCCACTGGCAGAAGTTCTTCAGCGATGGGGTGATGCAAAAGATCCCGAATCAAATCGCTG
AGGGACCGATTTATGCCATTTACACTGACTATGAAAGCGATGTGAACGGCGAGTATTCATTCGTTCTGGGTAAAGAGGTT
TCTTCCTTTGATAATTTGCCGGACGGCCTGATTTCCAAAGTATTGCCGGCATCCAGATATGCCGCGTTCACTTCCAAACA
GGGACAGATGCCCAATGTCGTGATCGAGCTTTGGCAGCACATCTGGGGCTTGAGTCCGGCGGATCTGGGCGCTGAGCGTG
CCTACGAGGCAGACTTTGAGGTTTATGATCAGCGCAGTGCGGATCCTCAAAACTGCCAGGTGGATGTGTTTTTGTCGGTT
CGTTAA

Upstream 100 bases:

>100_bases
AGCGGTGATTGCCGCTCGTGCCGATGGTTCCGTGGTTTATTTCCAGAATAAAAAGAACTTCGAAAAATTCCGCGCGCGTA
AATAATTTCCAGGAGATCCC

Downstream 100 bases:

>100_bases
ATCTTGTCGCTGCGGTCCTGAACTTTGTCGATCAGGCCTTCGATGGCGTCTTCCAGAATATCCAACACGTGATCAAAACC
GTCGACGCCTCCATAGTAAG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTHSFTQKADIKIVGISVRTSNGAEMKGSGKIGAHWQKFFSDGVMQKIPNQIAEGPIYAIYTDYESDVNGEYSFVLGKEV
SSFDNLPDGLISKVLPASRYAAFTSKQGQMPNVVIELWQHIWGLSPADLGAERAYEADFEVYDQRSADPQNCQVDVFLSV
R

Sequences:

>Translated_161_residues
MTHSFTQKADIKIVGISVRTSNGAEMKGSGKIGAHWQKFFSDGVMQKIPNQIAEGPIYAIYTDYESDVNGEYSFVLGKEV
SSFDNLPDGLISKVLPASRYAAFTSKQGQMPNVVIELWQHIWGLSPADLGAERAYEADFEVYDQRSADPQNCQVDVFLSV
R
>Mature_160_residues
THSFTQKADIKIVGISVRTSNGAEMKGSGKIGAHWQKFFSDGVMQKIPNQIAEGPIYAIYTDYESDVNGEYSFVLGKEVS
SFDNLPDGLISKVLPASRYAAFTSKQGQMPNVVIELWQHIWGLSPADLGAERAYEADFEVYDQRSADPQNCQVDVFLSVR

Specific function: Unknown

COG id: COG3708

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010499
- InterPro:   IPR011256 [H]

Pfam domain/function: PF06445 AraC_E_bind [H]

EC number: NA

Molecular weight: Translated: 17860; Mature: 17729

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHSFTQKADIKIVGISVRTSNGAEMKGSGKIGAHWQKFFSDGVMQKIPNQIAEGPIYAI
CCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCEEEE
YTDYESDVNGEYSFVLGKEVSSFDNLPDGLISKVLPASRYAAFTSKQGQMPNVVIELWQH
EECCCCCCCCCEEEEECCCHHHHCCCCHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHH
IWGLSPADLGAERAYEADFEVYDQRSADPQNCQVDVFLSVR
HHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure 
THSFTQKADIKIVGISVRTSNGAEMKGSGKIGAHWQKFFSDGVMQKIPNQIAEGPIYAI
CCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCEEEE
YTDYESDVNGEYSFVLGKEVSSFDNLPDGLISKVLPASRYAAFTSKQGQMPNVVIELWQH
EECCCCCCCCCEEEEECCCHHHHCCCCHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHH
IWGLSPADLGAERAYEADFEVYDQRSADPQNCQVDVFLSVR
HHCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]