| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is pgi [H]
Identifier: 42522325
GI number: 42522325
Start: 703843
End: 705069
Strand: Direct
Name: pgi [H]
Synonym: Bd0741
Alternate gene names: 42522325
Gene position: 703843-705069 (Clockwise)
Preceding gene: 42522324
Following gene: 42522326
Centisome position: 18.61
GC content: 48.57
Gene sequence:
>1227_bases ATGCACGTTATGTTGGAGATTTCGCATTCGTTTCATAAAATTGATGAATCTGTTTTGGTGAAGTGTCAGGAGTCTTTGAA GTTGTTTTTGCAACGTAAAGAGATTGGCTTTCCGCAGGTGATGGAGCGTGTTTCTTTGTGGCAGCAGTCTTATAAAGTTG GGACTGAACTGGCGGAGAAATTTAAGAAGATTGTTATTGTTGGTTTGGGTGGAAGTTCGCTGGGGACTCGTGTCATTGCG GAAGTTTTCTGTGCTCGCAATATGTTCTTTGTCGACAATGTGGATGCTCTGGAATTTGAGACTTTGATTGAAGAGCTGGG GGACCTTAAAGAGGTTGCTTGGGTCTTTATTTCCAAGAGTGGAACTACGATTGAATCTTTGTGTGCTTTGGAGCTTGTGG ATCAGATTTACACGGAAGAAAAACTGAATCTTCCCAAGCACAGTGTGGTTATTTCTGAAACCAAAGACAGCAGTTTGATG GCTTGGGCTCGCAAGCATTCTATTCCTACTTGTGAAATTCCTTTGGATGTTGGGGGGCGCTTCTCGGTGCTTTCTCCGGT GGGGATGATGCCGGCGGCGTTCCTGGGGTTGGATCTTGAAAAGTTCCGTGTCGGGGCGATGCGTGCCTTGAATGACACGG CGGTTGTGACTCAGACGATGGCGCAAGTGGCGCAAAGTTATCAGCGGGAAGAATGGATCACTCTGCTTTGGATTTACAAT TCTCGTATGAAGTCTTTCGGGGCTTGGTATCAGCAGCTGTGGGCGGAGTCTTTGGGGAAACCTGAAACTCGTGCGGGGAA ACCGGCTCCGCGTGTGAGCACGCCGATGTCTGCTGTTGGGGCTTCGGATCAACATTCGATTTTGCAGCAGGTGATGGAAG GAACCAAAGACAAGTTCGTTGTGTTCCAGCGTGTGGAAGAATCCGAGGCGGGTTCTTTGCGCATCAAGAAGGCTCAGTTC AAAGAAACTCAGGACCTTGAAGGTCGCACGATGGGTGAACTGCTGCGGGCAGAAGGTTTGGCCACGCAGGAGGCTTTGAA TCAGAGTGGTGTTTCCACGATGACTCTTAAGACTAAAGTCCTAGATGAGCACTCTTTGGGTTACATGTTCATGTTCTGGC AACTTGTGGTTGCGGGGCTTGGAGATTACCTGGAAATCGACGCCTTCAATCAGCCGGGTGTCGAGCTGGGCAAGAGACTA GCGAAAGAGAAATTGAAGAAAGCTTGA
Upstream 100 bases:
>100_bases CCCGGTAGTTTTCTGGCTGGCCCTTCGGGCGCCGCGGGGATGGGGAGTGCTGGCTCCCTTTGGGAGCGTCGCTGGGTTGG GACTAACTTTTTAGAAAGAG
Downstream 100 bases:
>100_bases TTGTCAGGTGACGGGGGGAAGTTTTATACTTTTCCCTATGGCTCACAACGATGACAACTCAGACAACTTAGAAAAAACCA GTATTGTTGCCAGCGACACT
Product: hypothetical protein
Products: NA
Alternate protein names: GPI; Phosphoglucose isomerase; PGI; Phosphohexose isomerase; PHI [H]
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MHVMLEISHSFHKIDESVLVKCQESLKLFLQRKEIGFPQVMERVSLWQQSYKVGTELAEKFKKIVIVGLGGSSLGTRVIA EVFCARNMFFVDNVDALEFETLIEELGDLKEVAWVFISKSGTTIESLCALELVDQIYTEEKLNLPKHSVVISETKDSSLM AWARKHSIPTCEIPLDVGGRFSVLSPVGMMPAAFLGLDLEKFRVGAMRALNDTAVVTQTMAQVAQSYQREEWITLLWIYN SRMKSFGAWYQQLWAESLGKPETRAGKPAPRVSTPMSAVGASDQHSILQQVMEGTKDKFVVFQRVEESEAGSLRIKKAQF KETQDLEGRTMGELLRAEGLATQEALNQSGVSTMTLKTKVLDEHSLGYMFMFWQLVVAGLGDYLEIDAFNQPGVELGKRL AKEKLKKA
Sequences:
>Translated_408_residues MHVMLEISHSFHKIDESVLVKCQESLKLFLQRKEIGFPQVMERVSLWQQSYKVGTELAEKFKKIVIVGLGGSSLGTRVIA EVFCARNMFFVDNVDALEFETLIEELGDLKEVAWVFISKSGTTIESLCALELVDQIYTEEKLNLPKHSVVISETKDSSLM AWARKHSIPTCEIPLDVGGRFSVLSPVGMMPAAFLGLDLEKFRVGAMRALNDTAVVTQTMAQVAQSYQREEWITLLWIYN SRMKSFGAWYQQLWAESLGKPETRAGKPAPRVSTPMSAVGASDQHSILQQVMEGTKDKFVVFQRVEESEAGSLRIKKAQF KETQDLEGRTMGELLRAEGLATQEALNQSGVSTMTLKTKVLDEHSLGYMFMFWQLVVAGLGDYLEIDAFNQPGVELGKRL AKEKLKKA >Mature_408_residues MHVMLEISHSFHKIDESVLVKCQESLKLFLQRKEIGFPQVMERVSLWQQSYKVGTELAEKFKKIVIVGLGGSSLGTRVIA EVFCARNMFFVDNVDALEFETLIEELGDLKEVAWVFISKSGTTIESLCALELVDQIYTEEKLNLPKHSVVISETKDSSLM AWARKHSIPTCEIPLDVGGRFSVLSPVGMMPAAFLGLDLEKFRVGAMRALNDTAVVTQTMAQVAQSYQREEWITLLWIYN SRMKSFGAWYQQLWAESLGKPETRAGKPAPRVSTPMSAVGASDQHSILQQVMEGTKDKFVVFQRVEESEAGSLRIKKAQF KETQDLEGRTMGELLRAEGLATQEALNQSGVSTMTLKTKVLDEHSLGYMFMFWQLVVAGLGDYLEIDAFNQPGVELGKRL AKEKLKKA
Specific function: Unknown
COG id: COG0166
COG function: function code G; Glucose-6-phosphate isomerase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GPI family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001672 - InterPro: IPR018189 [H]
Pfam domain/function: PF00342 PGI [H]
EC number: =5.3.1.9 [H]
Molecular weight: Translated: 45760; Mature: 45760
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: PS00174 P_GLUCOSE_ISOMERASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVMLEISHSFHKIDESVLVKCQESLKLFLQRKEIGFPQVMERVSLWQQSYKVGTELAEK CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH FKKIVIVGLGGSSLGTRVIAEVFCARNMFFVDNVDALEFETLIEELGDLKEVAWVFISKS HHHEEEEECCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHEEECC GTTIESLCALELVDQIYTEEKLNLPKHSVVISETKDSSLMAWARKHSIPTCEIPLDVGGR CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCC FSVLSPVGMMPAAFLGLDLEKFRVGAMRALNDTAVVTQTMAQVAQSYQREEWITLLWIYN EEHHCCHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEEEEEH SRMKSFGAWYQQLWAESLGKPETRAGKPAPRVSTPMSAVGASDQHSILQQVMEGTKDKFV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCHHH VFQRVEESEAGSLRIKKAQFKETQDLEGRTMGELLRAEGLATQEALNQSGVSTMTLKTKV HHHHHCCCCCCCEEEEHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCEEEEEEHHH LDEHSLGYMFMFWQLVVAGLGDYLEIDAFNQPGVELGKRLAKEKLKKA HCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MHVMLEISHSFHKIDESVLVKCQESLKLFLQRKEIGFPQVMERVSLWQQSYKVGTELAEK CEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH FKKIVIVGLGGSSLGTRVIAEVFCARNMFFVDNVDALEFETLIEELGDLKEVAWVFISKS HHHEEEEECCCCHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHEEECC GTTIESLCALELVDQIYTEEKLNLPKHSVVISETKDSSLMAWARKHSIPTCEIPLDVGGR CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCEEEECCCCCC FSVLSPVGMMPAAFLGLDLEKFRVGAMRALNDTAVVTQTMAQVAQSYQREEWITLLWIYN EEHHCCHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHEEEEEEEH SRMKSFGAWYQQLWAESLGKPETRAGKPAPRVSTPMSAVGASDQHSILQQVMEGTKDKFV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCHHH VFQRVEESEAGSLRIKKAQFKETQDLEGRTMGELLRAEGLATQEALNQSGVSTMTLKTKV HHHHHCCCCCCCEEEEHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCEEEEEEHHH LDEHSLGYMFMFWQLVVAGLGDYLEIDAFNQPGVELGKRLAKEKLKKA HCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA