| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522324
Identifier: 42522324
GI number: 42522324
Start: 702472
End: 703611
Strand: Direct
Name: 42522324
Synonym: Bd0740
Alternate gene names: NA
Gene position: 702472-703611 (Clockwise)
Preceding gene: 42522323
Following gene: 42522325
Centisome position: 18.57
GC content: 49.74
Gene sequence:
>1140_bases ATGGAGTCCGCTTCCCAGGTAGAAAGTAGCGAGGGCACCGCCGTCGCGAAACCTGCTCCCGTAAAAAAGATCAAGATCAT CGTCAGTGATCTCCATTTGGGGAAGGGCCGCCTGTTGGAAAAAGGCGGAATCAATTCGCTTGAAGAATTCTATTACGGGG AAAAGCTTGTGGAGTTCATCCACTTCTATTCCACCGGTGTCTATCGCGACTATGAAGTCGAACTGATCATCAACGGGGAC TTCCTGAACTTCCTGCAGTGTGATTACAAAGGCCACTTCCTGTCCGTGATCACTGAATCCGTGACTTTGGAGATTTTGAA AGACTGCGTGAACGGGCACAAGGCCGTCTTCACAGCTTTGGCTGAATTCGCCGCAAAACCCGGCAACACCATCACCTACA TCGTCGGTAACCATGATCAGGGGATGCTGTGGCCCGCCTGTCGCGCCTACCTGAATCAGGTCATCGGCACGCCGATTCGT TTTAAAAACATCGTTTACTTCTTTGATGGAGTTCACATCGAACACGGCCATATGCATGAGGCCGCCAATCGTATGGACCC CAAAAAGTTCTTCCTAAAAAAGGATCTGGTGGAGCCGATCCTGAATCTGCCGTTTGGATCCCATTTCTTCCTGGAAGTCG TGTTGAAAATCAAACAACACTACCCCCATGTCGACAAGATCCGTCCTTTCGGCAAAATGGTCCGCTGGGCTTTCCTGAAC GAAACCGGAACAATGGTTCGCGCCTTCTTTATGGCCATGGGGTATTTCCTGAAAAGCATCCTGGTCAAGGATCCGCGCCG TCATTGGCCTTTGAAACGAATTATCCAGGTGATTGCCGAAAGCGCGATCTTCCCGGATTTGAGTGAATCAGCGCGTAAAA TCCTGGGGGATGACCGCGTGCACACGGTGATCTTTGGCCACACCCATGTTTATCAGTATCGCCAGTGGTCCGAGAATAAA GAATATTTCAATACGGGAACATGGACTGAGATCACTTCTTTGGATATTGTGTCCTTGGGAAAGATCACGAAACTAACCTA TGTTCTTATCGAATACCCTGAAGACGGAGGCCGGCCGCGAGGTAGGTTGAAGGAGTGGAAGGGTTACCACAAAATCGAAG AAGACGTAGCTATTTCCTAG
Upstream 100 bases:
>100_bases CAGGATCAAGTCAAACGAACCGAGCGCGCACTGCGTTTGGCTTTGACGAACCTGGAGGCGAAAGAAGAGAATCTCGTTCC GTTGAAGAAAGCTGAGTAGT
Downstream 100 bases:
>100_bases GCGGGCGATGAAAACGGCCCATCCGACTGCGTTGTCGGACAGCCTTCTCGCTTCGACGTGCTTGGAGCACGCCTGCGCTG CGAGGGCTGTCCTCCGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MESASQVESSEGTAVAKPAPVKKIKIIVSDLHLGKGRLLEKGGINSLEEFYYGEKLVEFIHFYSTGVYRDYEVELIINGD FLNFLQCDYKGHFLSVITESVTLEILKDCVNGHKAVFTALAEFAAKPGNTITYIVGNHDQGMLWPACRAYLNQVIGTPIR FKNIVYFFDGVHIEHGHMHEAANRMDPKKFFLKKDLVEPILNLPFGSHFFLEVVLKIKQHYPHVDKIRPFGKMVRWAFLN ETGTMVRAFFMAMGYFLKSILVKDPRRHWPLKRIIQVIAESAIFPDLSESARKILGDDRVHTVIFGHTHVYQYRQWSENK EYFNTGTWTEITSLDIVSLGKITKLTYVLIEYPEDGGRPRGRLKEWKGYHKIEEDVAIS
Sequences:
>Translated_379_residues MESASQVESSEGTAVAKPAPVKKIKIIVSDLHLGKGRLLEKGGINSLEEFYYGEKLVEFIHFYSTGVYRDYEVELIINGD FLNFLQCDYKGHFLSVITESVTLEILKDCVNGHKAVFTALAEFAAKPGNTITYIVGNHDQGMLWPACRAYLNQVIGTPIR FKNIVYFFDGVHIEHGHMHEAANRMDPKKFFLKKDLVEPILNLPFGSHFFLEVVLKIKQHYPHVDKIRPFGKMVRWAFLN ETGTMVRAFFMAMGYFLKSILVKDPRRHWPLKRIIQVIAESAIFPDLSESARKILGDDRVHTVIFGHTHVYQYRQWSENK EYFNTGTWTEITSLDIVSLGKITKLTYVLIEYPEDGGRPRGRLKEWKGYHKIEEDVAIS >Mature_379_residues MESASQVESSEGTAVAKPAPVKKIKIIVSDLHLGKGRLLEKGGINSLEEFYYGEKLVEFIHFYSTGVYRDYEVELIINGD FLNFLQCDYKGHFLSVITESVTLEILKDCVNGHKAVFTALAEFAAKPGNTITYIVGNHDQGMLWPACRAYLNQVIGTPIR FKNIVYFFDGVHIEHGHMHEAANRMDPKKFFLKKDLVEPILNLPFGSHFFLEVVLKIKQHYPHVDKIRPFGKMVRWAFLN ETGTMVRAFFMAMGYFLKSILVKDPRRHWPLKRIIQVIAESAIFPDLSESARKILGDDRVHTVIFGHTHVYQYRQWSENK EYFNTGTWTEITSLDIVSLGKITKLTYVLIEYPEDGGRPRGRLKEWKGYHKIEEDVAIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43580; Mature: 43580
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: PS00012 PHOSPHOPANTETHEINE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESASQVESSEGTAVAKPAPVKKIKIIVSDLHLGKGRLLEKGGINSLEEFYYGEKLVEFI CCCHHHCCCCCCCEECCCCCHHHEEEEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHHH HFYSTGVYRDYEVELIINGDFLNFLQCDYKGHFLSVITESVTLEILKDCVNGHKAVFTAL HHHHCCCEECEEEEEEEECCCEEHHEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AEFAAKPGNTITYIVGNHDQGMLWPACRAYLNQVIGTPIRFKNIVYFFDGVHIEHGHMHE HHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHEEEEEECCEEEECCCHHH AANRMDPKKFFLKKDLVEPILNLPFGSHFFLEVVLKIKQHYPHVDKIRPFGKMVRWAFLN HHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHC ETGTMVRAFFMAMGYFLKSILVKDPRRHWPLKRIIQVIAESAIFPDLSESARKILGDDRV CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCE HTVIFGHTHVYQYRQWSENKEYFNTGTWTEITSLDIVSLGKITKLTYVLIEYPEDGGRPR EEEEECCHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHCHHHEEEEEEEECCCCCCCCC GRLKEWKGYHKIEEDVAIS CHHHHHCCHHHHHHHHCCC >Mature Secondary Structure MESASQVESSEGTAVAKPAPVKKIKIIVSDLHLGKGRLLEKGGINSLEEFYYGEKLVEFI CCCHHHCCCCCCCEECCCCCHHHEEEEEECCCCCCCCEECCCCCCHHHHHHHHHHHHHHH HFYSTGVYRDYEVELIINGDFLNFLQCDYKGHFLSVITESVTLEILKDCVNGHKAVFTAL HHHHCCCEECEEEEEEEECCCEEHHEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AEFAAKPGNTITYIVGNHDQGMLWPACRAYLNQVIGTPIRFKNIVYFFDGVHIEHGHMHE HHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCHHHEEEEEECCEEEECCCHHH AANRMDPKKFFLKKDLVEPILNLPFGSHFFLEVVLKIKQHYPHVDKIRPFGKMVRWAFLN HHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHC ETGTMVRAFFMAMGYFLKSILVKDPRRHWPLKRIIQVIAESAIFPDLSESARKILGDDRV CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCE HTVIFGHTHVYQYRQWSENKEYFNTGTWTEITSLDIVSLGKITKLTYVLIEYPEDGGRPR EEEEECCHHHHHHHHHCCCCCCCCCCCCCEECCCCHHHHCHHHEEEEEEEECCCCCCCCC GRLKEWKGYHKIEEDVAIS CHHHHHCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA