| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is pfkB [C]
Identifier: 42522318
GI number: 42522318
Start: 695109
End: 696017
Strand: Direct
Name: pfkB [C]
Synonym: Bd0734
Alternate gene names: 42522318
Gene position: 695109-696017 (Clockwise)
Preceding gene: 42522317
Following gene: 42522319
Centisome position: 18.37
GC content: 50.39
Gene sequence:
>909_bases ATGTCTGAAATTCTTGTTGTCGGCAGTCTGGCTTACGATTCCATTGAAACTCCATCCGGTAAAGTGGACCGCGCTTTGGG TGGTTCCGCGAACTACTTCTCTTTGGCAGCGTCTTTGTTCTCCAAAGTGCGTGTTGTCGGTGTTGTTGGTGAGGACTATG ACCAGAAGGACTATGATCTTCTGAACAATCGGGGTGTGGATCTGGCGGGTCTTTCCAAAGTTCCGGGTAAGACATTCCAC TGGGCGGGTTCCTATGAAGGTGACCTGAATGAAGCTAAAACTTTAAAAACCGATCTGAACGTGTTTGCGGACTTCAATCC GCAGTTGCCAGAGCATTTCAAAGATTCCTCTTTCGTGTTCCTGGCAAATATCGCCCCTGAACTGCAATTGCAGGTACTGG AGCAGGTGAAATCCCCTAAGTTTGTTGGCATGGACACCATGAACTTCTGGATCTCCATCAAAAAGGACAAGCTGATTGAT GTCCTGAAAAAGGTGGATCTGGTTCTGATCAATGAAGGGGAAGCGAAGATGCTGACGGGCGCAGCCAATGCGATCTCGGC GGCGCCTTTGATCACGGCCATGGGCCCTAAGGCCGTTGTGATCAAACGCGGTGAGTACGGCTTTGCAATGTACACCAAGG ACGAAGGTTACTTCATCCTGCCAGCCATGCCGATTCCGACTGTTGTCGATCCAACCGGTGCGGGTGACACGTTTGCTGGC GGTTTCTTCGGTTACCTGGCTGCGCAGAAGGAAGTTCCGACGATTGCGAACCTGAAGCAAGCCTGCATCATGGGATCCAT GATGGCCTCCCACACAATCCAGGATTTCTCTGTGAAAGCTCTGGCGAAAGTGACTTTGGGCGATCTTGAAAAACGCCTGA CTGAGTACAAGAAAGTCATCACTGTTTAA
Upstream 100 bases:
>100_bases GATATTTCCAACTCTCGTCTGGCGGGTCTTCCTAAATACAAACGTGAACTTTTGGCTGCGCAAGAAGCAGAACAAAACAA TCAACACTAGAGGTAACATT
Downstream 100 bases:
>100_bases ATTCCTGTCAAAGGCCTCCACTCTGGAGGCTTTTTTCTTTGTTAAGATGTCTTGTGATTTGAAGATAAATTGAAAAATGT TTGTTATTGAAAGTCCGGTT
Product: carbohydrate kinase
Products: NA
Alternate protein names: Carbohydrate Kinase; Ribokinase-Like Domain-Containing Protein; PfkB Domain-Containing Protein; PfkB Family Carbohydrate Kinase; Carbohydrate Kinase PfkB Family Protein; Pfkb Domain Protein; Carbohydrate Kinase PfkB Family; Kinase Pfkb Family; Ribokinase Family Sugar Kinase; Ribokinase; PfkB Family Kinase; PfkB Family Protein; Ribokinase Family; Carbohydrate/Purine Kinase; Ribokinase-Like Protein; Kinase PfkB Family; Sugar Kinases Ribokinase Family; Carbohydrate Kinase PfkB; ATP-Dependent Phosphofructokinase
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSEILVVGSLAYDSIETPSGKVDRALGGSANYFSLAASLFSKVRVVGVVGEDYDQKDYDLLNNRGVDLAGLSKVPGKTFH WAGSYEGDLNEAKTLKTDLNVFADFNPQLPEHFKDSSFVFLANIAPELQLQVLEQVKSPKFVGMDTMNFWISIKKDKLID VLKKVDLVLINEGEAKMLTGAANAISAAPLITAMGPKAVVIKRGEYGFAMYTKDEGYFILPAMPIPTVVDPTGAGDTFAG GFFGYLAAQKEVPTIANLKQACIMGSMMASHTIQDFSVKALAKVTLGDLEKRLTEYKKVITV
Sequences:
>Translated_302_residues MSEILVVGSLAYDSIETPSGKVDRALGGSANYFSLAASLFSKVRVVGVVGEDYDQKDYDLLNNRGVDLAGLSKVPGKTFH WAGSYEGDLNEAKTLKTDLNVFADFNPQLPEHFKDSSFVFLANIAPELQLQVLEQVKSPKFVGMDTMNFWISIKKDKLID VLKKVDLVLINEGEAKMLTGAANAISAAPLITAMGPKAVVIKRGEYGFAMYTKDEGYFILPAMPIPTVVDPTGAGDTFAG GFFGYLAAQKEVPTIANLKQACIMGSMMASHTIQDFSVKALAKVTLGDLEKRLTEYKKVITV >Mature_301_residues SEILVVGSLAYDSIETPSGKVDRALGGSANYFSLAASLFSKVRVVGVVGEDYDQKDYDLLNNRGVDLAGLSKVPGKTFHW AGSYEGDLNEAKTLKTDLNVFADFNPQLPEHFKDSSFVFLANIAPELQLQVLEQVKSPKFVGMDTMNFWISIKKDKLIDV LKKVDLVLINEGEAKMLTGAANAISAAPLITAMGPKAVVIKRGEYGFAMYTKDEGYFILPAMPIPTVVDPTGAGDTFAGG FFGYLAAQKEVPTIANLKQACIMGSMMASHTIQDFSVKALAKVTLGDLEKRLTEYKKVITV
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32724; Mature: 32593
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEILVVGSLAYDSIETPSGKVDRALGGSANYFSLAASLFSKVRVVGVVGEDYDQKDYDL CCCEEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCHHH LNNRGVDLAGLSKVPGKTFHWAGSYEGDLNEAKTLKTDLNVFADFNPQLPEHFKDSSFVF HHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHEEECCCCCCHHHCCCCCEEE LANIAPELQLQVLEQVKSPKFVGMDTMNFWISIKKDKLIDVLKKVDLVLINEGEAKMLTG EECCCCHHHHHHHHHHCCCCEECEECEEEEEEECHHHHHHHHHHCCEEEECCCCCEEEEC AANAISAAPLITAMGPKAVVIKRGEYGFAMYTKDEGYFILPAMPIPTVVDPTGAGDTFAG CCHHHHHCCCEEECCCCEEEEECCCCCEEEEECCCCEEEEECCCCCCEECCCCCCCCCCC GFFGYLAAQKEVPTIANLKQACIMGSMMASHTIQDFSVKALAKVTLGDLEKRLTEYKKVI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TV CC >Mature Secondary Structure SEILVVGSLAYDSIETPSGKVDRALGGSANYFSLAASLFSKVRVVGVVGEDYDQKDYDL CCEEEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCHHH LNNRGVDLAGLSKVPGKTFHWAGSYEGDLNEAKTLKTDLNVFADFNPQLPEHFKDSSFVF HHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHEEECCCCCCHHHCCCCCEEE LANIAPELQLQVLEQVKSPKFVGMDTMNFWISIKKDKLIDVLKKVDLVLINEGEAKMLTG EECCCCHHHHHHHHHHCCCCEECEECEEEEEEECHHHHHHHHHHCCEEEECCCCCEEEEC AANAISAAPLITAMGPKAVVIKRGEYGFAMYTKDEGYFILPAMPIPTVVDPTGAGDTFAG CCHHHHHCCCEEECCCCEEEEECCCCCEEEEECCCCEEEEECCCCCCEECCCCCCCCCCC GFFGYLAAQKEVPTIANLKQACIMGSMMASHTIQDFSVKALAKVTLGDLEKRLTEYKKVI HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TV CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA