Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

Click here to switch to the map view.

The map label for this gene is 42522319

Identifier: 42522319

GI number: 42522319

Start: 696188

End: 697093

Strand: Direct

Name: 42522319

Synonym: Bd0735

Alternate gene names: NA

Gene position: 696188-697093 (Clockwise)

Preceding gene: 42522318

Following gene: 42522322

Centisome position: 18.4

GC content: 46.8

Gene sequence:

>906_bases
ATGAAAACAGCTATATATTTACTTTTAGCGTTCTTGTTTTTGGCGGCTTCGGTCATTTCCTGCTCGGAAGAGCCCAAAGC
ATTGATCCCGACGGATTTGCCCAGCACTGAAGAGCCGGAAACTCCAACTAACCCGGTGAACTCAGATCCAACAGTTGCGG
CGGATACGGCGCTGTATTTCCGTCTTGGTTTGCAATGGGAGTCTGCTGTGGATGGAACTTTCGTGGATTGGCCGACTTCC
ACTAGTTTGGGAGGTGATAGGTGCAATATTTCAGTGGCATCACCTTTGGCGCAAAGAAATATCACTTGTGCATTTTCAAT
TCCGGAAGCGCGACTTTTCTACAGTCACGTCAATTTCAAAATGGGTACTTCCGTGGCTTCGGCGTGCCCCATTCTGAAAT
TCCGACCTTATTACTATGTTCGATCGAATTTGGATGTCGTGGCGCCGGATCCGGCGGCGATGCCTCCAATTTTAGGTTCA
CCGGGTTACACCCCTCCTGGCAGTGATACTGCAATTTCGTGCGGTGATGGGAAAGATAAGTCCTGCTATGGTGGCGCTGC
CCCCACTTTGGTTCCTGAATTTCCAAAGAACGGTGGCCTCTATTTCTTAACGCATATCAATTCTGAAAGTGCTTATAAGC
TCGGTTCAGAAAACAGCTTACGATACTACGGGAATGGTGGTGTATTGGTAAACTATTTGGTAACCAATAACCTGGATCCG
GTAGGGCGTGGGATCACCGTTGCGACGAATTCCAACAAAAATGAACGCGTTGAGGATACCTTTTTTGACTATCATATTTC
TTGCGTGAACTACTGGGGTGAAACATTGTATGAAATTAACCTGTTTATCTCCGATGAAAACTTTGATGATAGTGGCGGTG
TCGACAACTACATCGACTGGAACTAG

Upstream 100 bases:

>100_bases
TGAAAAATGTTTGTTATTGAAAGTCCGGTTTTTAGACAAGAAGCAAACAATTGTTGTTTAGTCCTCTTTTGGGAAGATCT
GCGATTCCGATGCGTAGAGT

Downstream 100 bases:

>100_bases
TCTGCTGTTGTTAGAAAATTGAAAACGAAAGAAGAGACCTAGGCTTCCTGGGTCTCTTTGCTTTTGTGGGTGATCTTTGC
CGGGATTTGCTCCGCGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MKTAIYLLLAFLFLAASVISCSEEPKALIPTDLPSTEEPETPTNPVNSDPTVAADTALYFRLGLQWESAVDGTFVDWPTS
TSLGGDRCNISVASPLAQRNITCAFSIPEARLFYSHVNFKMGTSVASACPILKFRPYYYVRSNLDVVAPDPAAMPPILGS
PGYTPPGSDTAISCGDGKDKSCYGGAAPTLVPEFPKNGGLYFLTHINSESAYKLGSENSLRYYGNGGVLVNYLVTNNLDP
VGRGITVATNSNKNERVEDTFFDYHISCVNYWGETLYEINLFISDENFDDSGGVDNYIDWN

Sequences:

>Translated_301_residues
MKTAIYLLLAFLFLAASVISCSEEPKALIPTDLPSTEEPETPTNPVNSDPTVAADTALYFRLGLQWESAVDGTFVDWPTS
TSLGGDRCNISVASPLAQRNITCAFSIPEARLFYSHVNFKMGTSVASACPILKFRPYYYVRSNLDVVAPDPAAMPPILGS
PGYTPPGSDTAISCGDGKDKSCYGGAAPTLVPEFPKNGGLYFLTHINSESAYKLGSENSLRYYGNGGVLVNYLVTNNLDP
VGRGITVATNSNKNERVEDTFFDYHISCVNYWGETLYEINLFISDENFDDSGGVDNYIDWN
>Mature_301_residues
MKTAIYLLLAFLFLAASVISCSEEPKALIPTDLPSTEEPETPTNPVNSDPTVAADTALYFRLGLQWESAVDGTFVDWPTS
TSLGGDRCNISVASPLAQRNITCAFSIPEARLFYSHVNFKMGTSVASACPILKFRPYYYVRSNLDVVAPDPAAMPPILGS
PGYTPPGSDTAISCGDGKDKSCYGGAAPTLVPEFPKNGGLYFLTHINSESAYKLGSENSLRYYGNGGVLVNYLVTNNLDP
VGRGITVATNSNKNERVEDTFFDYHISCVNYWGETLYEINLFISDENFDDSGGVDNYIDWN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32737; Mature: 32737

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTAIYLLLAFLFLAASVISCSEEPKALIPTDLPSTEEPETPTNPVNSDPTVAADTALYF
CCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEECEEEEE
RLGLQWESAVDGTFVDWPTSTSLGGDRCNISVASPLAQRNITCAFSIPEARLFYSHVNFK
EECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHHCCEEEEEECCCCEEEEEECCEE
MGTSVASACPILKFRPYYYVRSNLDVVAPDPAAMPPILGSPGYTPPGSDTAISCGDGKDK
ECCCHHHHCCEEEECCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
SCYGGAAPTLVPEFPKNGGLYFLTHINSESAYKLGSENSLRYYGNGGVLVNYLVTNNLDP
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCEEEEECCCEEEEEEEECCCCC
VGRGITVATNSNKNERVEDTFFDYHISCVNYWGETLYEINLFISDENFDDSGGVDNYIDW
CCCCEEEEECCCCCCCHHHHHHHEEEHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCC
N
C
>Mature Secondary Structure
MKTAIYLLLAFLFLAASVISCSEEPKALIPTDLPSTEEPETPTNPVNSDPTVAADTALYF
CCHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEECEEEEE
RLGLQWESAVDGTFVDWPTSTSLGGDRCNISVASPLAQRNITCAFSIPEARLFYSHVNFK
EECCCCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHHCCEEEEEECCCCEEEEEECCEE
MGTSVASACPILKFRPYYYVRSNLDVVAPDPAAMPPILGSPGYTPPGSDTAISCGDGKDK
ECCCHHHHCCEEEECCEEEEECCCEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
SCYGGAAPTLVPEFPKNGGLYFLTHINSESAYKLGSENSLRYYGNGGVLVNYLVTNNLDP
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCEEEEECCCEEEEEEEECCCCC
VGRGITVATNSNKNERVEDTFFDYHISCVNYWGETLYEINLFISDENFDDSGGVDNYIDW
CCCCEEEEECCCCCCCHHHHHHHEEEHHHHHCCCEEEEEEEEEECCCCCCCCCCCCCCCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA