Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522151

Identifier: 42522151

GI number: 42522151

Start: 513066

End: 513725

Strand: Direct

Name: 42522151

Synonym: Bd0552

Alternate gene names: NA

Gene position: 513066-513725 (Clockwise)

Preceding gene: 42522149

Following gene: 42522155

Centisome position: 13.56

GC content: 54.39

Gene sequence:

>660_bases
ATGAAACAGATTTTTCTTTTCGCACTGATGTTGGTTTCCGTTCCGGCCCATTCAATCCCCGTTCCGGATCCGATCCCGGG
GCTGCAGGCGGCGCTGCAGTTCTGTCTGATGATTGAGGATGAAAATGAAATCCCACAATGCGTGCGCCTGGAAAGCGGCG
CCAACTGGGTCACCAAAGAGGCTCTGCCAATCTGTCGCAACCAGAATTTCGATTCCGACCGTGTGAACTGTCTGGCGGGC
ATTGTGAACCGGGATATCCGCCCGGAGGAAGTGGACGTCTGTGAGTCTCTGACTTTCGACGATGAAAAGGCCCGCTGTCT
GGCCGGGATTCAAAGACCCTTCCCCTATCGCACGCGTCTGAAAGTGGATCCTCGCCCGGGTTTGCAGGCCGCCTCCCGTT
TGTGTCAGTCCTTCTTTCATGATGAAGACAAACGTCGTTGTCTGAACGAAATGTCCGCCGCGGAATTATTTACTGTGGAG
GCGGTGGGCTTCTGTGCGGATCGTTTTAGTGATGACGAAAAGATTCAGTGTTTGGGAAGACTGCGCAACAAGTTTATTGT
GCGCGAGGAAGTGCTGATGTGTGACCGGGTCTTTGATGAGGGCGGGAAGCTGGCGTGCCTTGAAGGCGTGCAGCGCAAGT
ATCAGTTACGCCGCCCTTAA

Upstream 100 bases:

>100_bases
TGACCAACTTTTGTCGGATGTAAGATTGCCGCATCAAACTGAGCTATAAGAGCTTGAGTCCCCTCATATTCAGGGGGATA
GTTGGGGGCGAGGTCTCGCT

Downstream 100 bases:

>100_bases
TATTTCAATTCTTATTTGGTTGGGCTGATTTTGCAGACTTCAACCAGGGTTCTTTCTTTCACTAGTGCGTAGATCTCTTC
GATTTCTTTGTTGGTCACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MKQIFLFALMLVSVPAHSIPVPDPIPGLQAALQFCLMIEDENEIPQCVRLESGANWVTKEALPICRNQNFDSDRVNCLAG
IVNRDIRPEEVDVCESLTFDDEKARCLAGIQRPFPYRTRLKVDPRPGLQAASRLCQSFFHDEDKRRCLNEMSAAELFTVE
AVGFCADRFSDDEKIQCLGRLRNKFIVREEVLMCDRVFDEGGKLACLEGVQRKYQLRRP

Sequences:

>Translated_219_residues
MKQIFLFALMLVSVPAHSIPVPDPIPGLQAALQFCLMIEDENEIPQCVRLESGANWVTKEALPICRNQNFDSDRVNCLAG
IVNRDIRPEEVDVCESLTFDDEKARCLAGIQRPFPYRTRLKVDPRPGLQAASRLCQSFFHDEDKRRCLNEMSAAELFTVE
AVGFCADRFSDDEKIQCLGRLRNKFIVREEVLMCDRVFDEGGKLACLEGVQRKYQLRRP
>Mature_219_residues
MKQIFLFALMLVSVPAHSIPVPDPIPGLQAALQFCLMIEDENEIPQCVRLESGANWVTKEALPICRNQNFDSDRVNCLAG
IVNRDIRPEEVDVCESLTFDDEKARCLAGIQRPFPYRTRLKVDPRPGLQAASRLCQSFFHDEDKRRCLNEMSAAELFTVE
AVGFCADRFSDDEKIQCLGRLRNKFIVREEVLMCDRVFDEGGKLACLEGVQRKYQLRRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25012; Mature: 25012

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
5.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIFLFALMLVSVPAHSIPVPDPIPGLQAALQFCLMIEDENEIPQCVRLESGANWVTKE
CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHEEECCCCCCHHHH
ALPICRNQNFDSDRVNCLAGIVNRDIRPEEVDVCESLTFDDEKARCLAGIQRPFPYRTRL
HHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEE
KVDPRPGLQAASRLCQSFFHDEDKRRCLNEMSAAELFTVEAVGFCADRFSDDEKIQCLGR
EECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LRNKFIVREEVLMCDRVFDEGGKLACLEGVQRKYQLRRP
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKQIFLFALMLVSVPAHSIPVPDPIPGLQAALQFCLMIEDENEIPQCVRLESGANWVTKE
CHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHEEECCCCCCHHHH
ALPICRNQNFDSDRVNCLAGIVNRDIRPEEVDVCESLTFDDEKARCLAGIQRPFPYRTRL
HHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCEE
KVDPRPGLQAASRLCQSFFHDEDKRRCLNEMSAAELFTVEAVGFCADRFSDDEKIQCLGR
EECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LRNKFIVREEVLMCDRVFDEGGKLACLEGVQRKYQLRRP
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA