| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522149
Identifier: 42522149
GI number: 42522149
Start: 510662
End: 510979
Strand: Direct
Name: 42522149
Synonym: Bd0550
Alternate gene names: NA
Gene position: 510662-510979 (Clockwise)
Preceding gene: 42522148
Following gene: 42522151
Centisome position: 13.5
GC content: 46.86
Gene sequence:
>318_bases ATGAAGCACGAAGAAAACCCCTGGTCCAAAGGCATCGTTCTGATCTGCACGAAATGCCATAAATCCATCAGCCCCAAACT GCTGGAAGAAGAAGGCAACAGTGCCGACAATCTGAAAATGTTCCTGAAAAAGTCTTTCAAGGAAAGTGGAGACGGCTCCA AGATCCGTGTGGTGACGACAAGCTGTCTGGATGTTTGTATCGACGACACTCAGGCGGTGACATTTGCCTCTACTGAAGGT GAAACAGAAACGTTCGCGATCCATCCAGAGAAGGACCGCGAAAAGCTTCTGAAACATCTGTATCAAAAGATCAAATAG
Upstream 100 bases:
>100_bases AAGTGCTTCCCTTTGAAAAAGCACGTAAAATTTATTATATGAACGAGATCCCACGCAGTGATTTGGGAAAAATTCTGTGG GCGGAGCTGAGGAGAAAACT
Downstream 100 bases:
>100_bases CTATTATTGGAAGGTTCCGTTGAAGGCGGAGCCTGACACTCCAGCGACTGCGGAAACAGTGAGGTCCAGCATCTTGCCGT TCAAGCCGGCGGTTTGTATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MKHEENPWSKGIVLICTKCHKSISPKLLEEEGNSADNLKMFLKKSFKESGDGSKIRVVTTSCLDVCIDDTQAVTFASTEG ETETFAIHPEKDREKLLKHLYQKIK
Sequences:
>Translated_105_residues MKHEENPWSKGIVLICTKCHKSISPKLLEEEGNSADNLKMFLKKSFKESGDGSKIRVVTTSCLDVCIDDTQAVTFASTEG ETETFAIHPEKDREKLLKHLYQKIK >Mature_105_residues MKHEENPWSKGIVLICTKCHKSISPKLLEEEGNSADNLKMFLKKSFKESGDGSKIRVVTTSCLDVCIDDTQAVTFASTEG ETETFAIHPEKDREKLLKHLYQKIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11884; Mature: 11884
Theoretical pI: Translated: 7.46; Mature: 7.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKHEENPWSKGIVLICTKCHKSISPKLLEEEGNSADNLKMFLKKSFKESGDGSKIRVVTT CCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEH SCLDVCIDDTQAVTFASTEGETETFAIHPEKDREKLLKHLYQKIK HHHHHHCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKHEENPWSKGIVLICTKCHKSISPKLLEEEGNSADNLKMFLKKSFKESGDGSKIRVVTT CCCCCCCCCCCEEEEEECCCCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCEEEEEEH SCLDVCIDDTQAVTFASTEGETETFAIHPEKDREKLLKHLYQKIK HHHHHHCCCCCEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA