| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42521912
Identifier: 42521912
GI number: 42521912
Start: 274837
End: 275172
Strand: Direct
Name: 42521912
Synonym: Bd0289
Alternate gene names: NA
Gene position: 274837-275172 (Clockwise)
Preceding gene: 42521911
Following gene: 42521913
Centisome position: 7.27
GC content: 50.3
Gene sequence:
>336_bases ATGGCTCAACATAACGACAGTAATTCGAATGTTCTTCATCCGCACATCACGCCACTGGCAACTTACTTCAAAGTTGCCCT GGCTTTGTTCGGTCTGACCTTCCTGACAATCATCGCCCACAACTTCAGAGCTGAATTGGGTGCTTTGGCTGCGCCAGTGG CGTTCCTGATTGCTTTGGTTAAGGCTACATTGGTCTGCCTTTGGTTCATGCACTTGAAAGACGACACCAAGATGAATCGC TTTGTCTTTGCATCTGGTTTCTTCTTCCTGGCGTTGCTGTTCGCGATCTGCGCGATCGACTTCGCGACTCGCGTTCACGA AGTCAGCCCGCTGTAA
Upstream 100 bases:
>100_bases TCAGTACTGGATCGTGGTAGAGGGTGTTGGTTTGTTCTGGCACATCGTCGACTTGATCTGGATCTTCCTATTCCCTCTTC TGTATTTGGTGGGGTAACAA
Downstream 100 bases:
>100_bases GATTATCGTGCTACGAATCTACGCAGATCTTACCAAGTTTGGCATAGTCGTTTTCTCAGTCCTAGCGGGACTGGCCGGCT ATGCCACTGGTTTTCAGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MAQHNDSNSNVLHPHITPLATYFKVALALFGLTFLTIIAHNFRAELGALAAPVAFLIALVKATLVCLWFMHLKDDTKMNR FVFASGFFFLALLFAICAIDFATRVHEVSPL
Sequences:
>Translated_111_residues MAQHNDSNSNVLHPHITPLATYFKVALALFGLTFLTIIAHNFRAELGALAAPVAFLIALVKATLVCLWFMHLKDDTKMNR FVFASGFFFLALLFAICAIDFATRVHEVSPL >Mature_110_residues AQHNDSNSNVLHPHITPLATYFKVALALFGLTFLTIIAHNFRAELGALAAPVAFLIALVKATLVCLWFMHLKDDTKMNRF VFASGFFFLALLFAICAIDFATRVHEVSPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12322; Mature: 12191
Theoretical pI: Translated: 8.27; Mature: 8.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQHNDSNSNVLHPHITPLATYFKVALALFGLTFLTIIAHNFRAELGALAAPVAFLIALV CCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KATLVCLWFMHLKDDTKMNRFVFASGFFFLALLFAICAIDFATRVHEVSPL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AQHNDSNSNVLHPHITPLATYFKVALALFGLTFLTIIAHNFRAELGALAAPVAFLIALV CCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KATLVCLWFMHLKDDTKMNRFVFASGFFFLALLFAICAIDFATRVHEVSPL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA