| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42521906
Identifier: 42521906
GI number: 42521906
Start: 269245
End: 270021
Strand: Direct
Name: 42521906
Synonym: Bd0283
Alternate gene names: NA
Gene position: 269245-270021 (Clockwise)
Preceding gene: 42521905
Following gene: 42521907
Centisome position: 7.12
GC content: 50.97
Gene sequence:
>777_bases ATGATTCATCACGAGGTTGTCGACGGGCTGGTTCCGGAAAGTGTTTTCTTTATCCATGGGAACCTGGCTTCCAACCGCTG GTGGTATCCGGCGCAGGAATTCTGGGAAAAACATGCGGCAGGGAAAAACTATTCCGGTTCTTTGATTTACGCTGAATTCC GCGGGTGCGGTAAAAGTGCCGCTCCTAAAGACAGTAGCGAAGTCGACATGCACCTGTTTGCCGAGGATTTCATCGCGTTG CTCAAGAAGTTGAATAAGGGTCCGTATCACCTTGTGGGGCATTCCACCGGGGGGCTGATTGCGGCACTGATGTTGTCAAA AGCACCCACTCTTTTTAAAAAGGCTGTCCTGCTTGATCCTGTCGGGGCACAAGGCGTCACATTTGATGCTTCGATGATCA CCGCGTTTGAGCAGATGAAACAAGATCGGGCGCTGACGGCGGCGGTGATTGGATCCACGATTCATAATAATAATCCTCAA TCCCAATACTTCCAGGAAGTGGTGGTGGCGGACGCCTATAAGGCCGTGCAAACCATCGGTCACTGGGTGCTTAAAGCCCT TGATGGGCTTGATGTTCGCGAGGATTTGAAGTCCGTGGAACACGAAGTTTTGGTGCTTCACGGGGAGCACGACAAGCTGC TTTCTGAGGTTGATTCTCAAGCTCTGGCGGCACTGTTTTCGCGCGGTAAATTCGCGCAAATCCCTGACTTGGGACATTGC CCAAATATCGAGAATCCCGAAGTCTTTGTGAACATCACTCGGAGTTATCTGTTTTAG
Upstream 100 bases:
>100_bases TTTCCGGCAACAAAAAGCTTTCTGAGGGCCGTGACTTTGAAGGATATCCTTTCCGCGGTGAAGTTCGCAGCGGTCAGGAA GAAATTCAGGTGGGTCGCGA
Downstream 100 bases:
>100_bases TGGTTGCGTGGCGCATTGCGCCGCGCAAAATCAACTCGACCGGGTCGGCGTAATAGGTTGCCCATCTGCCTGTTTTCGGT TAGTTATCGTTTAATATATT
Product: putative carboxylesterase
Products: NA
Alternate protein names: Carboxylesterase; Alpha/Beta Hydrolase Fold Protein
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MIHHEVVDGLVPESVFFIHGNLASNRWWYPAQEFWEKHAAGKNYSGSLIYAEFRGCGKSAAPKDSSEVDMHLFAEDFIAL LKKLNKGPYHLVGHSTGGLIAALMLSKAPTLFKKAVLLDPVGAQGVTFDASMITAFEQMKQDRALTAAVIGSTIHNNNPQ SQYFQEVVVADAYKAVQTIGHWVLKALDGLDVREDLKSVEHEVLVLHGEHDKLLSEVDSQALAALFSRGKFAQIPDLGHC PNIENPEVFVNITRSYLF
Sequences:
>Translated_258_residues MIHHEVVDGLVPESVFFIHGNLASNRWWYPAQEFWEKHAAGKNYSGSLIYAEFRGCGKSAAPKDSSEVDMHLFAEDFIAL LKKLNKGPYHLVGHSTGGLIAALMLSKAPTLFKKAVLLDPVGAQGVTFDASMITAFEQMKQDRALTAAVIGSTIHNNNPQ SQYFQEVVVADAYKAVQTIGHWVLKALDGLDVREDLKSVEHEVLVLHGEHDKLLSEVDSQALAALFSRGKFAQIPDLGHC PNIENPEVFVNITRSYLF >Mature_258_residues MIHHEVVDGLVPESVFFIHGNLASNRWWYPAQEFWEKHAAGKNYSGSLIYAEFRGCGKSAAPKDSSEVDMHLFAEDFIAL LKKLNKGPYHLVGHSTGGLIAALMLSKAPTLFKKAVLLDPVGAQGVTFDASMITAFEQMKQDRALTAAVIGSTIHNNNPQ SQYFQEVVVADAYKAVQTIGHWVLKALDGLDVREDLKSVEHEVLVLHGEHDKLLSEVDSQALAALFSRGKFAQIPDLGHC PNIENPEVFVNITRSYLF
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28499; Mature: 28499
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHHEVVDGLVPESVFFIHGNLASNRWWYPAQEFWEKHAAGKNYSGSLIYAEFRGCGKSA CCCHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCC APKDSSEVDMHLFAEDFIALLKKLNKGPYHLVGHSTGGLIAALMLSKAPTLFKKAVLLDP CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCC VGAQGVTFDASMITAFEQMKQDRALTAAVIGSTIHNNNPQSQYFQEVVVADAYKAVQTIG CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH HWVLKALDGLDVREDLKSVEHEVLVLHGEHDKLLSEVDSQALAALFSRGKFAQIPDLGHC HHHHHHHCCCCHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PNIENPEVFVNITRSYLF CCCCCCEEEEEEHHHHCC >Mature Secondary Structure MIHHEVVDGLVPESVFFIHGNLASNRWWYPAQEFWEKHAAGKNYSGSLIYAEFRGCGKSA CCCHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEEECCCCCCC APKDSSEVDMHLFAEDFIALLKKLNKGPYHLVGHSTGGLIAALMLSKAPTLFKKAVLLDP CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCC VGAQGVTFDASMITAFEQMKQDRALTAAVIGSTIHNNNPQSQYFQEVVVADAYKAVQTIG CCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH HWVLKALDGLDVREDLKSVEHEVLVLHGEHDKLLSEVDSQALAALFSRGKFAQIPDLGHC HHHHHHHCCCCHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC PNIENPEVFVNITRSYLF CCCCCCEEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA