Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521905

Identifier: 42521905

GI number: 42521905

Start: 268268

End: 269248

Strand: Direct

Name: 42521905

Synonym: Bd0282

Alternate gene names: NA

Gene position: 268268-269248 (Clockwise)

Preceding gene: 42521904

Following gene: 42521906

Centisome position: 7.09

GC content: 50.36

Gene sequence:

>981_bases
TTGAGTGTCTTGGTATCAGGTTTCTTTGTGTCCTTGGAATCTTTGGCAAAGGCTGAAGCGTTCAAAGGCTTCGTTCAGGT
TGCTCCGCAAAAAGAGTTGTTTGTGGATTATGTTCCGGCCAAAGAAAAACAGCCCACCGTTGTTTTGGTCAATGGTCTGA
CTTACAGCACCCGCCAGTGGGATTCTTTCGTGAATGCACTGCTGGCAAAAGGTGTCGGCGTTTTGCGCTATGATCCGATC
GGGCAGGGGCAGACTTTGTTGAAGTATGCTCCGGTGGTGGCACCGATTCCGGTTCAGGATCAGGTTGTTGATCTGAAGTC
GCTGTTAGATAAAATGAATTTAAAAGGTCCTTACAATATTGCAGGACTGTCTTATGGCGGTGGTGTGGCTGCAGGCTTCA
CCGCCGCTTATCCATCCCTGGTGAAAAATCTGATCATGATGGCGCCGTTCACGCGCCCGCTGGATGGTCAGGATCAGTGG
ATTCGTGCGCAGATCTGGGCGACTCGTCAGATTTTCCCGTTCAACAAAATGTCCGATGATGATCTGTATGATTATTATCT
GCACCAGATCATCTATGCGACCTACCCGCAGGCAGAACCCATCGTGCTTGAAAATCCATTCAAGCTGGAAGCCACCTTCC
GTCTGGTTCAGGGGATTCGCAAATACCGCCCGATAGATCTGACCAGCTCCATTCCGGCGAAGTCCTTGCATTTGTTGATT
GCGCGTCAGGATCAGTACATCAACACCAGCGTGCTGGATGAATACTGGGATGCAGTTCCGGAACAATCCCGCGCCAGCCG
TTTGTATATCAACGGTTCTGAACACAAGATGGTGGAAGCGGTTCCGAATTTCACGGCGGCCTGGGTTTATCAGATTCTTT
CCGGCAACAAAAAGCTTTCTGAGGGCCGTGACTTTGAAGGATATCCTTTCCGCGGTGAAGTTCGCAGCGGTCAGGAAGAA
ATTCAGGTGGGTCGCGAATGA

Upstream 100 bases:

>100_bases
TCAACGGCGCTGTGATCAGCGTTGATGGTGGTTTGGTTCTATAAATGATCTGACAACTTTTTTATAAGGAGTGACTTCGA
TGAGATTTCTGTTCTTGGCT

Downstream 100 bases:

>100_bases
TTCATCACGAGGTTGTCGACGGGCTGGTTCCGGAAAGTGTTTTCTTTATCCATGGGAACCTGGCTTCCAACCGCTGGTGG
TATCCGGCGCAGGAATTCTG

Product: putative lysophospholipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MSVLVSGFFVSLESLAKAEAFKGFVQVAPQKELFVDYVPAKEKQPTVVLVNGLTYSTRQWDSFVNALLAKGVGVLRYDPI
GQGQTLLKYAPVVAPIPVQDQVVDLKSLLDKMNLKGPYNIAGLSYGGGVAAGFTAAYPSLVKNLIMMAPFTRPLDGQDQW
IRAQIWATRQIFPFNKMSDDDLYDYYLHQIIYATYPQAEPIVLENPFKLEATFRLVQGIRKYRPIDLTSSIPAKSLHLLI
ARQDQYINTSVLDEYWDAVPEQSRASRLYINGSEHKMVEAVPNFTAAWVYQILSGNKKLSEGRDFEGYPFRGEVRSGQEE
IQVGRE

Sequences:

>Translated_326_residues
MSVLVSGFFVSLESLAKAEAFKGFVQVAPQKELFVDYVPAKEKQPTVVLVNGLTYSTRQWDSFVNALLAKGVGVLRYDPI
GQGQTLLKYAPVVAPIPVQDQVVDLKSLLDKMNLKGPYNIAGLSYGGGVAAGFTAAYPSLVKNLIMMAPFTRPLDGQDQW
IRAQIWATRQIFPFNKMSDDDLYDYYLHQIIYATYPQAEPIVLENPFKLEATFRLVQGIRKYRPIDLTSSIPAKSLHLLI
ARQDQYINTSVLDEYWDAVPEQSRASRLYINGSEHKMVEAVPNFTAAWVYQILSGNKKLSEGRDFEGYPFRGEVRSGQEE
IQVGRE
>Mature_325_residues
SVLVSGFFVSLESLAKAEAFKGFVQVAPQKELFVDYVPAKEKQPTVVLVNGLTYSTRQWDSFVNALLAKGVGVLRYDPIG
QGQTLLKYAPVVAPIPVQDQVVDLKSLLDKMNLKGPYNIAGLSYGGGVAAGFTAAYPSLVKNLIMMAPFTRPLDGQDQWI
RAQIWATRQIFPFNKMSDDDLYDYYLHQIIYATYPQAEPIVLENPFKLEATFRLVQGIRKYRPIDLTSSIPAKSLHLLIA
RQDQYINTSVLDEYWDAVPEQSRASRLYINGSEHKMVEAVPNFTAAWVYQILSGNKKLSEGRDFEGYPFRGEVRSGQEEI
QVGRE

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36644; Mature: 36513

Theoretical pI: Translated: 6.82; Mature: 6.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVLVSGFFVSLESLAKAEAFKGFVQVAPQKELFVDYVPAKEKQPTVVLVNGLTYSTRQW
CCEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCEEEEECCCCCHHHH
DSFVNALLAKGVGVLRYDPIGQGQTLLKYAPVVAPIPVQDQVVDLKSLLDKMNLKGPYNI
HHHHHHHHHCCCCEEEECCCCCCCHHHHHCCEECCCCCCHHHHHHHHHHHHHCCCCCCCE
AGLSYGGGVAAGFTAAYPSLVKNLIMMAPFTRPLDGQDQWIRAQIWATRQIFPFNKMSDD
EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCC
DLYDYYLHQIIYATYPQAEPIVLENPFKLEATFRLVQGIRKYRPIDLTSSIPAKSLHLLI
HHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
ARQDQYINTSVLDEYWDAVPEQSRASRLYINGSEHKMVEAVPNFTAAWVYQILSGNKKLS
ECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHCCCHHHHHHHHHHCCCCCCC
EGRDFEGYPFRGEVRSGQEEIQVGRE
CCCCCCCCCCCCCCCCCHHHHHCCCC
>Mature Secondary Structure 
SVLVSGFFVSLESLAKAEAFKGFVQVAPQKELFVDYVPAKEKQPTVVLVNGLTYSTRQW
CEEHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCEEEEECCCCCHHHH
DSFVNALLAKGVGVLRYDPIGQGQTLLKYAPVVAPIPVQDQVVDLKSLLDKMNLKGPYNI
HHHHHHHHHCCCCEEEECCCCCCCHHHHHCCEECCCCCCHHHHHHHHHHHHHCCCCCCCE
AGLSYGGGVAAGFTAAYPSLVKNLIMMAPFTRPLDGQDQWIRAQIWATRQIFPFNKMSDD
EEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCC
DLYDYYLHQIIYATYPQAEPIVLENPFKLEATFRLVQGIRKYRPIDLTSSIPAKSLHLLI
HHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE
ARQDQYINTSVLDEYWDAVPEQSRASRLYINGSEHKMVEAVPNFTAAWVYQILSGNKKLS
ECCCCCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHCCCHHHHHHHHHHCCCCCCC
EGRDFEGYPFRGEVRSGQEEIQVGRE
CCCCCCCCCCCCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA