Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521907

Identifier: 42521907

GI number: 42521907

Start: 270170

End: 270706

Strand: Direct

Name: 42521907

Synonym: Bd0284

Alternate gene names: NA

Gene position: 270170-270706 (Clockwise)

Preceding gene: 42521906

Following gene: 42521908

Centisome position: 7.14

GC content: 46.55

Gene sequence:

>537_bases
ATGTCTGAGCCTAGAGATGAGTATAACCGTAGTGGTCTGCTGGCGTTTGCCTTTTCAATGGTATTCGTCTGTGCATTCTT
CGTTTACATCGTTGCGATCAATAAAGGTGTTGATCTTGGCGAGAACGTTGTAGATCCAAATGCCCCTGCAGTAGAGGGCG
CTGTTCCTGTCTTTGATATCACCAAAGTTCCAGATCCTTGGGTTTCCACTCCGGAAATGGTTGCTTACGGTAAAAAGTTC
TACGCTACAAACTGCGCTATGTGCCACGGTAACGAAGGCAAAGGCGACGGTGCTGCGGGTGCAGCTTTGAATCCAAAACC
ACGCAACTTGGTTGAGGGTAAATGGACTCAAGGTGAAGGCGTTATTGCTCACTTTAAAGTTCTGCAAAATGGTATCAAAG
GTTCCTCTATGGCGGCGTACTCTCATTTCAAGCCTGCTGACCGCTGGGCCGTGATCCATTTCATCGATTCTATCACTGAA
AATAAATCTAAAGACGATCCTGCTGCAGTTGCTGAGTTTGCAAAAACCGCACAATAA

Upstream 100 bases:

>100_bases
CGTAATAGGTTGCCCATCTGCCTGTTTTCGGTTAGTTATCGTTTAATATATTACAATACTGTGACAAAACTACTTTGCGT
CCCCCAGGGAGTGCCAACCT

Downstream 100 bases:

>100_bases
TTAAGGATTTAATTAATGCTTGCCAATGAGCTGGTATTGAAAACAAAGACAATGGGAGCGGTACTGACAACGGCCGTTCT
TGTTTTGTTTTCAGCAAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome C Class I; High-Affinity Fe2+/Pb2+ Permease; PbrT Protein

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MSEPRDEYNRSGLLAFAFSMVFVCAFFVYIVAINKGVDLGENVVDPNAPAVEGAVPVFDITKVPDPWVSTPEMVAYGKKF
YATNCAMCHGNEGKGDGAAGAALNPKPRNLVEGKWTQGEGVIAHFKVLQNGIKGSSMAAYSHFKPADRWAVIHFIDSITE
NKSKDDPAAVAEFAKTAQ

Sequences:

>Translated_178_residues
MSEPRDEYNRSGLLAFAFSMVFVCAFFVYIVAINKGVDLGENVVDPNAPAVEGAVPVFDITKVPDPWVSTPEMVAYGKKF
YATNCAMCHGNEGKGDGAAGAALNPKPRNLVEGKWTQGEGVIAHFKVLQNGIKGSSMAAYSHFKPADRWAVIHFIDSITE
NKSKDDPAAVAEFAKTAQ
>Mature_177_residues
SEPRDEYNRSGLLAFAFSMVFVCAFFVYIVAINKGVDLGENVVDPNAPAVEGAVPVFDITKVPDPWVSTPEMVAYGKKFY
ATNCAMCHGNEGKGDGAAGAALNPKPRNLVEGKWTQGEGVIAHFKVLQNGIKGSSMAAYSHFKPADRWAVIHFIDSITEN
KSKDDPAAVAEFAKTAQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19173; Mature: 19042

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEPRDEYNRSGLLAFAFSMVFVCAFFVYIVAINKGVDLGENVVDPNAPAVEGAVPVFDI
CCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEC
TKVPDPWVSTPEMVAYGKKFYATNCAMCHGNEGKGDGAAGAALNPKPRNLVEGKWTQGEG
CCCCCCCCCCHHHHHHCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VIAHFKVLQNGIKGSSMAAYSHFKPADRWAVIHFIDSITENKSKDDPAAVAEFAKTAQ
HHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SEPRDEYNRSGLLAFAFSMVFVCAFFVYIVAINKGVDLGENVVDPNAPAVEGAVPVFDI
CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEC
TKVPDPWVSTPEMVAYGKKFYATNCAMCHGNEGKGDGAAGAALNPKPRNLVEGKWTQGEG
CCCCCCCCCCHHHHHHCCHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
VIAHFKVLQNGIKGSSMAAYSHFKPADRWAVIHFIDSITENKSKDDPAAVAEFAKTAQ
HHHHHHHHHCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA