| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42521831
Identifier: 42521831
GI number: 42521831
Start: 186743
End: 187702
Strand: Direct
Name: 42521831
Synonym: Bd0201
Alternate gene names: NA
Gene position: 186743-187702 (Clockwise)
Preceding gene: 42521830
Following gene: 42521832
Centisome position: 4.94
GC content: 53.54
Gene sequence:
>960_bases TTGTTCCTGTTTCTGGCAAGCTGTCAGAACTTAAGAACCCGTGAAGACATCCGCAAAACTCCGCAGCCGACTCCCAGCCG TCCGGGGGTGACGCAACCGCGTCCTCCGGAAAATGTCGGCACTCCTCCGCCGATGGAATCAGATGAAGAAGACGTGGCTG AGACGCCACCGCCTCCTCCGGCGCCGGTGATCCCGACAATGCCCAAGATCGGCGTGATCCTGGGTGGCGGCGGGGCCAAG ACCTACGCGCATATTGGGTTCTTGCATGAACTGCAAAGAGCCAAGGTTCCGGTTTACGCTATTGGTGGAGTTGAGTTTGC AGCTCCGATGGCGGCCCTTTACGCCAACAAGGAACTGGCCAACGATGTAGAGTGGCAGATGTTCAAGCTGAAGGATGAAG AGGTTTTGAAAAAATCTCTTCTGGGTGGCGTGAACAAGAATAACGAAGTGACGGTGTTGAAGGACTTTGTCGGTGTGGCT TTCAACCGCACCAAGGTGGAAGACTTTAAGATTCCTTTTGCCTGTCCGTCCTACAACTTGAAAAAGAATCAGGTTTACCT GATGAACCGCGGTGGCATCGATCAGTTGATGTACCTGTGCATGGCGTATCCGCCGTTCTTCAAGCCCCACCAAAACAGTG TGGCGGGGGTTCGCGACATCACGGCTTTGGCCAATTACCTGCGCCAAAAAGGGGCTAACTATATCGTGATGGTCAATGTG TTGCAGGCTCCGGGGGGTTCAAAACCCTTCACGCTGGAGTCCAGTGCCACCGACAACGTCTTATGGAGTGAAATCGCGGG ACTGTATAATAAGCCTTTGCCAGGAGTTGACACTGTCATCTCGCTTGATACATCCAGCTATGGTATTATGGATTTCGACA AGCGTCGTGAGATCATGAACAAGGGCGCAGACTCAGCTGCCCGTCAGTTGAAGGGTCTGACCCGCAAGTGGGGACTTTAG
Upstream 100 bases:
>100_bases AATGGATTTAAGGTTCTCGACTACTTCCCATCTCCGATTCAGGGAAAGGACGGAAATAATGAGTTCTTTGTTTTTGCCAA AAAAATCTAGTTGGATTGTC
Downstream 100 bases:
>100_bases GAGAATTTATGAGCAGAAAACCCATCTATGACATGAACATCTTTTCCGAGAGAAGGAAAAAAGCCGGGGAGCAGATCCCA GGTGGTGCTTTGGTTGTGGC
Product: alpha-beta hydrolase superfamily protein
Products: NA
Alternate protein names: Patatin-Like Phospholipase; Esterase Of Alpha-Beta Hydrolase Superfamily; Alpha-Beta Hydrolase Superfamily Esterase; Alpha-Beta Hydrolase Superfamily Protein
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MFLFLASCQNLRTREDIRKTPQPTPSRPGVTQPRPPENVGTPPPMESDEEDVAETPPPPPAPVIPTMPKIGVILGGGGAK TYAHIGFLHELQRAKVPVYAIGGVEFAAPMAALYANKELANDVEWQMFKLKDEEVLKKSLLGGVNKNNEVTVLKDFVGVA FNRTKVEDFKIPFACPSYNLKKNQVYLMNRGGIDQLMYLCMAYPPFFKPHQNSVAGVRDITALANYLRQKGANYIVMVNV LQAPGGSKPFTLESSATDNVLWSEIAGLYNKPLPGVDTVISLDTSSYGIMDFDKRREIMNKGADSAARQLKGLTRKWGL
Sequences:
>Translated_319_residues MFLFLASCQNLRTREDIRKTPQPTPSRPGVTQPRPPENVGTPPPMESDEEDVAETPPPPPAPVIPTMPKIGVILGGGGAK TYAHIGFLHELQRAKVPVYAIGGVEFAAPMAALYANKELANDVEWQMFKLKDEEVLKKSLLGGVNKNNEVTVLKDFVGVA FNRTKVEDFKIPFACPSYNLKKNQVYLMNRGGIDQLMYLCMAYPPFFKPHQNSVAGVRDITALANYLRQKGANYIVMVNV LQAPGGSKPFTLESSATDNVLWSEIAGLYNKPLPGVDTVISLDTSSYGIMDFDKRREIMNKGADSAARQLKGLTRKWGL >Mature_319_residues MFLFLASCQNLRTREDIRKTPQPTPSRPGVTQPRPPENVGTPPPMESDEEDVAETPPPPPAPVIPTMPKIGVILGGGGAK TYAHIGFLHELQRAKVPVYAIGGVEFAAPMAALYANKELANDVEWQMFKLKDEEVLKKSLLGGVNKNNEVTVLKDFVGVA FNRTKVEDFKIPFACPSYNLKKNQVYLMNRGGIDQLMYLCMAYPPFFKPHQNSVAGVRDITALANYLRQKGANYIVMVNV LQAPGGSKPFTLESSATDNVLWSEIAGLYNKPLPGVDTVISLDTSSYGIMDFDKRREIMNKGADSAARQLKGLTRKWGL
Specific function: Unknown
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35127; Mature: 35127
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLFLASCQNLRTREDIRKTPQPTPSRPGVTQPRPPENVGTPPPMESDEEDVAETPPPPP CEEEEECHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC APVIPTMPKIGVILGGGGAKTYAHIGFLHELQRAKVPVYAIGGVEFAAPMAALYANKELA CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCHHHH NDVEWQMFKLKDEEVLKKSLLGGVNKNNEVTVLKDFVGVAFNRTKVEDFKIPFACPSYNL CCCCEEEEECCHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCCCHHHEECCEECCCCCC KKNQVYLMNRGGIDQLMYLCMAYPPFFKPHQNSVAGVRDITALANYLRQKGANYIVMVNV CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEE LQAPGGSKPFTLESSATDNVLWSEIAGLYNKPLPGVDTVISLDTSSYGIMDFDKRREIMN EECCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH KGADSAARQLKGLTRKWGL CCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MFLFLASCQNLRTREDIRKTPQPTPSRPGVTQPRPPENVGTPPPMESDEEDVAETPPPPP CEEEEECHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCC APVIPTMPKIGVILGGGGAKTYAHIGFLHELQRAKVPVYAIGGVEFAAPMAALYANKELA CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCHHHH NDVEWQMFKLKDEEVLKKSLLGGVNKNNEVTVLKDFVGVAFNRTKVEDFKIPFACPSYNL CCCCEEEEECCHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCCCHHHEECCEECCCCCC KKNQVYLMNRGGIDQLMYLCMAYPPFFKPHQNSVAGVRDITALANYLRQKGANYIVMVNV CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEE LQAPGGSKPFTLESSATDNVLWSEIAGLYNKPLPGVDTVISLDTSSYGIMDFDKRREIMN EECCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH KGADSAARQLKGLTRKWGL CCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA