Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521740

Identifier: 42521740

GI number: 42521740

Start: 88821

End: 89933

Strand: Direct

Name: 42521740

Synonym: Bd0095

Alternate gene names: NA

Gene position: 88821-89933 (Clockwise)

Preceding gene: 42521739

Following gene: 42521741

Centisome position: 2.35

GC content: 48.97

Gene sequence:

>1113_bases
ATGAAGCTTTGGATTTTCAGCGCGTTGATTCTTCCCGTTCAAGTTCTGGCTTCGGCCCCGGCTTTTCAAGAGTCCATTTC
TGGCATCAATCCTCACCTAAAAAAATCCCCGAAATTTGAAATCCCTGTCGCCAACGACAAGGACCTGTACCTGCGCATGG
AAAAGGCACTGACCTCGGAACATCCCGAGCAGTCTTTGCGCATTTTGGCCGAAGAAGGTGACTTCACCACATGCTCAGCC
TTTCAGGCCACGGCACCTTCCGGTTTGCTGCCGATGACGGGGCTTTTGGACATTTCAAAAAAACTCAATGACGAGGCGAT
CGCCGCAAAATCCTGGGAACAAAGTCTGAAGCTGGCGAATCTGTGGTGGCACTTTGGCAATTGTGAAATGCCGGTGATCA
CCGGACAGATCGGCATGGCACTTTTGAAGGATTCCCTGACGGAAATGGCGAAACTTTCCAAAGAAAATATGAGTGATGAA
GATCGCACAAAGTTGTCTGAGTTAAAACGCAACATCAAGGATTGGAATCCTTCCGCCCACTTGGAAAAAGAACTTCGTTT
TGAGATGGTCTTAACCCCCGCTTTGCTGCTGCCCGAGCTGAAATCGGGAAAGTTTGAATTTAACAAAGAAGAGCTTGAAG
AAGAAAGTTCGGAAGAAACCGCGTTGGTTGGATTTCCGGGCCTGATCAAACTTTTGTATCCGGATGGTTATGGCACCTTT
GACTGGAGTGAAGGGGCAAAACCCGTGGCGGCGGCGGTGGATCAAATCAAGGGCGCGAAAAATCCAGCGGCCGCGATGGG
AAAGGCCGTTGATGAGCAGGAAGCAAAATATTTGAAATCCTTCTATGAACAACTGAGCCTGCGCGATCAGGGGGTGAAGT
CTGTGAAGGATCTATTGAAAGATGCGAAAGCCACCGCGCTGATTGAAACTTTGCAAAAAGACGAAGAGCTGCTGAAGGCA
AAACGCGAGCTGGCGCAAATCTATAAAGACAAATCCGCCTTCATGATGGCAGTGCTGGTTTTCAAACGGACGACGCCGAA
CTTTTCCAGATCCATCGATAAAAAAGCGCATTCCCTGCACAAGGATCTGATCCGACTCAGCAAGCCTTTGTAA

Upstream 100 bases:

>100_bases
TTTAGATTGTGATTAAGAAAACCAAGTCCATAAGACTTGGTTTTTTTATTTTTACCCCCTGTAAAATTCGATAGCATGGA
ATCTCCAAAAGGAGTTTGCC

Downstream 100 bases:

>100_bases
GTCTCGAATGGCCCGGGGGCCCAATCCGGGCCCGCCTTTGTATCAATTTCCTGTAAAGCCTATTTTGTCTCAAAGTGACC
CAAAAGGGCCTCTTTTCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 370

Protein sequence:

>370_residues
MKLWIFSALILPVQVLASAPAFQESISGINPHLKKSPKFEIPVANDKDLYLRMEKALTSEHPEQSLRILAEEGDFTTCSA
FQATAPSGLLPMTGLLDISKKLNDEAIAAKSWEQSLKLANLWWHFGNCEMPVITGQIGMALLKDSLTEMAKLSKENMSDE
DRTKLSELKRNIKDWNPSAHLEKELRFEMVLTPALLLPELKSGKFEFNKEELEEESSEETALVGFPGLIKLLYPDGYGTF
DWSEGAKPVAAAVDQIKGAKNPAAAMGKAVDEQEAKYLKSFYEQLSLRDQGVKSVKDLLKDAKATALIETLQKDEELLKA
KRELAQIYKDKSAFMMAVLVFKRTTPNFSRSIDKKAHSLHKDLIRLSKPL

Sequences:

>Translated_370_residues
MKLWIFSALILPVQVLASAPAFQESISGINPHLKKSPKFEIPVANDKDLYLRMEKALTSEHPEQSLRILAEEGDFTTCSA
FQATAPSGLLPMTGLLDISKKLNDEAIAAKSWEQSLKLANLWWHFGNCEMPVITGQIGMALLKDSLTEMAKLSKENMSDE
DRTKLSELKRNIKDWNPSAHLEKELRFEMVLTPALLLPELKSGKFEFNKEELEEESSEETALVGFPGLIKLLYPDGYGTF
DWSEGAKPVAAAVDQIKGAKNPAAAMGKAVDEQEAKYLKSFYEQLSLRDQGVKSVKDLLKDAKATALIETLQKDEELLKA
KRELAQIYKDKSAFMMAVLVFKRTTPNFSRSIDKKAHSLHKDLIRLSKPL
>Mature_370_residues
MKLWIFSALILPVQVLASAPAFQESISGINPHLKKSPKFEIPVANDKDLYLRMEKALTSEHPEQSLRILAEEGDFTTCSA
FQATAPSGLLPMTGLLDISKKLNDEAIAAKSWEQSLKLANLWWHFGNCEMPVITGQIGMALLKDSLTEMAKLSKENMSDE
DRTKLSELKRNIKDWNPSAHLEKELRFEMVLTPALLLPELKSGKFEFNKEELEEESSEETALVGFPGLIKLLYPDGYGTF
DWSEGAKPVAAAVDQIKGAKNPAAAMGKAVDEQEAKYLKSFYEQLSLRDQGVKSVKDLLKDAKATALIETLQKDEELLKA
KRELAQIYKDKSAFMMAVLVFKRTTPNFSRSIDKKAHSLHKDLIRLSKPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41412; Mature: 41412

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLWIFSALILPVQVLASAPAFQESISGINPHLKKSPKFEIPVANDKDLYLRMEKALTSE
CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCC
HPEQSLRILAEEGDFTTCSAFQATAPSGLLPMTGLLDISKKLNDEAIAAKSWEQSLKLAN
CCHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LWWHFGNCEMPVITGQIGMALLKDSLTEMAKLSKENMSDEDRTKLSELKRNIKDWNPSAH
HHEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHH
LEKELRFEMVLTPALLLPELKSGKFEFNKEELEEESSEETALVGFPGLIKLLYPDGYGTF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEECHHHHHEEECCCCCCC
DWSEGAKPVAAAVDQIKGAKNPAAAMGKAVDEQEAKYLKSFYEQLSLRDQGVKSVKDLLK
CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAKATALIETLQKDEELLKAKRELAQIYKDKSAFMMAVLVFKRTTPNFSRSIDKKAHSLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KDLIRLSKPL
HHHHHHCCCC
>Mature Secondary Structure
MKLWIFSALILPVQVLASAPAFQESISGINPHLKKSPKFEIPVANDKDLYLRMEKALTSE
CCHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCC
HPEQSLRILAEEGDFTTCSAFQATAPSGLLPMTGLLDISKKLNDEAIAAKSWEQSLKLAN
CCHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
LWWHFGNCEMPVITGQIGMALLKDSLTEMAKLSKENMSDEDRTKLSELKRNIKDWNPSAH
HHEECCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHH
LEKELRFEMVLTPALLLPELKSGKFEFNKEELEEESSEETALVGFPGLIKLLYPDGYGTF
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCEEEEECHHHHHEEECCCCCCC
DWSEGAKPVAAAVDQIKGAKNPAAAMGKAVDEQEAKYLKSFYEQLSLRDQGVKSVKDLLK
CCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DAKATALIETLQKDEELLKAKRELAQIYKDKSAFMMAVLVFKRTTPNFSRSIDKKAHSLH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KDLIRLSKPL
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA