Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521741

Identifier: 42521741

GI number: 42521741

Start: 89941

End: 90636

Strand: Direct

Name: 42521741

Synonym: Bd0096

Alternate gene names: NA

Gene position: 89941-90636 (Clockwise)

Preceding gene: 42521740

Following gene: 42521742

Centisome position: 2.38

GC content: 51.72

Gene sequence:

>696_bases
ATGGCCCGGGGGCCCAATCCGGGCCCGCCTTTGTATCAATTTCCTGTAAAGCCTATTTTGTCTCAAAGTGACCCAAAAGG
GCCTCTTTTCGGGGTCCAAATCGTTTATATTGCAAATGAGCCATCTTTCGCCGGGCATAGCCTTTGTATTATGGGGACTT
GGAATTATCGGACGTCTGCTGGAGGACTCATGCGCCTTATTAAATATCTGCCCCTTATCGCCTTTTGGAGTCTGACGACT
TTCACTATGAAAGCGGGCGCCGAAGTAAAGAGCTATCGGGAGTGGAAAACCGAAAGAGTTCAACAGGCTCAGGTCAAAGT
CACAACTTTGAAGTCCCAGATCGATGCCCGTAAAGGTATCCGCCTGGCTGCGGGCGGAACGGACCCCAATATGGCTCACC
GCGCGGGTTTGGAGGCGGTGGCTTCTCAGGATATCTCTGTGGAAAAGCTGGAACGCGAACTTCGTGAGGAAATCTATGAC
CTTGAGGTCGCTAAAGACCTGTCCGTGACGGACTATTTCGTGGGTTATCTTACGAAGGTTCAGGATAAAAAGACCGCCTT
CAATGAAGTGGCCGGCAAACTGTCCCCTGAAGAGGTGGCGGAGCTGATGACGGCCTATGCGAACTCTGTGTTCGGGGCGC
ATTCTTCGGACCTTCCGGCCAGTGCGAATAACTTCGGAAAAGACGGCGTTAAATAA

Upstream 100 bases:

>100_bases
TTCAAACGGACGACGCCGAACTTTTCCAGATCCATCGATAAAAAAGCGCATTCCCTGCACAAGGATCTGATCCGACTCAG
CAAGCCTTTGTAAGTCTCGA

Downstream 100 bases:

>100_bases
GCCCTCGAAAATTCTAAATAAGTCTTAATCTTTATTCGGCGCGCCAAAGTGTTTCATTCAGGAAAATTGGGCGCCCGACC
TTGACTCTTTCCACAGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 230

Protein sequence:

>231_residues
MARGPNPGPPLYQFPVKPILSQSDPKGPLFGVQIVYIANEPSFAGHSLCIMGTWNYRTSAGGLMRLIKYLPLIAFWSLTT
FTMKAGAEVKSYREWKTERVQQAQVKVTTLKSQIDARKGIRLAAGGTDPNMAHRAGLEAVASQDISVEKLERELREEIYD
LEVAKDLSVTDYFVGYLTKVQDKKTAFNEVAGKLSPEEVAELMTAYANSVFGAHSSDLPASANNFGKDGVK

Sequences:

>Translated_231_residues
MARGPNPGPPLYQFPVKPILSQSDPKGPLFGVQIVYIANEPSFAGHSLCIMGTWNYRTSAGGLMRLIKYLPLIAFWSLTT
FTMKAGAEVKSYREWKTERVQQAQVKVTTLKSQIDARKGIRLAAGGTDPNMAHRAGLEAVASQDISVEKLERELREEIYD
LEVAKDLSVTDYFVGYLTKVQDKKTAFNEVAGKLSPEEVAELMTAYANSVFGAHSSDLPASANNFGKDGVK
>Mature_230_residues
ARGPNPGPPLYQFPVKPILSQSDPKGPLFGVQIVYIANEPSFAGHSLCIMGTWNYRTSAGGLMRLIKYLPLIAFWSLTTF
TMKAGAEVKSYREWKTERVQQAQVKVTTLKSQIDARKGIRLAAGGTDPNMAHRAGLEAVASQDISVEKLERELREEIYDL
EVAKDLSVTDYFVGYLTKVQDKKTAFNEVAGKLSPEEVAELMTAYANSVFGAHSSDLPASANNFGKDGVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25349; Mature: 25218

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARGPNPGPPLYQFPVKPILSQSDPKGPLFGVQIVYIANEPSFAGHSLCIMGTWNYRTSA
CCCCCCCCCCCEECCCCHHHCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCCH
GGLMRLIKYLPLIAFWSLTTFTMKAGAEVKSYREWKTERVQQAQVKVTTLKSQIDARKGI
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
RLAAGGTDPNMAHRAGLEAVASQDISVEKLERELREEIYDLEVAKDLSVTDYFVGYLTKV
EEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QDKKTAFNEVAGKLSPEEVAELMTAYANSVFGAHSSDLPASANNFGKDGVK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARGPNPGPPLYQFPVKPILSQSDPKGPLFGVQIVYIANEPSFAGHSLCIMGTWNYRTSA
CCCCCCCCCCEECCCCHHHCCCCCCCCEEEEEEEEEECCCCCCCCCEEEEECCCCCCCH
GGLMRLIKYLPLIAFWSLTTFTMKAGAEVKSYREWKTERVQQAQVKVTTLKSQIDARKGI
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE
RLAAGGTDPNMAHRAGLEAVASQDISVEKLERELREEIYDLEVAKDLSVTDYFVGYLTKV
EEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
QDKKTAFNEVAGKLSPEEVAELMTAYANSVFGAHSSDLPASANNFGKDGVK
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA