Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521739

Identifier: 42521739

GI number: 42521739

Start: 88127

End: 88582

Strand: Direct

Name: 42521739

Synonym: Bd0094

Alternate gene names: NA

Gene position: 88127-88582 (Clockwise)

Preceding gene: 42521738

Following gene: 42521740

Centisome position: 2.33

GC content: 52.85

Gene sequence:

>456_bases
ATGAAAAGCACGTTTTATCTTAAAATCGGCATGATGGTTCTGGCTCTGGTGGGTGTTTTCTATGGCATGAAGGCCCTGGA
TGGCGGCGCTTTAGAGGACAAGGCCTCGGACCCGCAAAGTGCGCTGGGTCTTCTGATCGGCAGCGACTATCGCCCCTTGA
ACTGGTGCCCGGAAAAAACCCAAAAGGTGGAGCTTTTTGACCCAGCCGGCGCCGTGACTAAAACCCTGGAAAAGCCTGAA
GACATCAGCTCCGTCTGTGAAATCATGATGGGGGCCTTTTCCATGGAAGGGATTGAGGAAAGCTCATTTAAAAAGAGCCT
GGCAGCCCATGGACCCTCGGGCGGACCGATTGTGATCCTGGAACAGGTTCCGGGAAAGCCTGTTTTCCGGGTCAAAGGCA
TGCCTTTTAGCTCTCCGATGCTTTCCAAGGCTTTGGATAGGCTTGCAGTTCCTTAA

Upstream 100 bases:

>100_bases
GGCCGCCTTTTTCCTTGAGGACTTGCTGCAGCCTCAAACAGCGGAATAGCCGGTCATGTTATAGCTAGCCAGTTTCAACT
CGCCGAGTTACGTTTGAGCG

Downstream 100 bases:

>100_bases
GATTATTTCTGTTTGACAACAGCCGCCCAAAGCCGCTAATTTAGCCCTTCACCGAGTTCAGAAGTAGCTCAGTCGGTAGA
GCAAGCGGCTGTTAACCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKSTFYLKIGMMVLALVGVFYGMKALDGGALEDKASDPQSALGLLIGSDYRPLNWCPEKTQKVELFDPAGAVTKTLEKPE
DISSVCEIMMGAFSMEGIEESSFKKSLAAHGPSGGPIVILEQVPGKPVFRVKGMPFSSPMLSKALDRLAVP

Sequences:

>Translated_151_residues
MKSTFYLKIGMMVLALVGVFYGMKALDGGALEDKASDPQSALGLLIGSDYRPLNWCPEKTQKVELFDPAGAVTKTLEKPE
DISSVCEIMMGAFSMEGIEESSFKKSLAAHGPSGGPIVILEQVPGKPVFRVKGMPFSSPMLSKALDRLAVP
>Mature_151_residues
MKSTFYLKIGMMVLALVGVFYGMKALDGGALEDKASDPQSALGLLIGSDYRPLNWCPEKTQKVELFDPAGAVTKTLEKPE
DISSVCEIMMGAFSMEGIEESSFKKSLAAHGPSGGPIVILEQVPGKPVFRVKGMPFSSPMLSKALDRLAVP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16169; Mature: 16169

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSTFYLKIGMMVLALVGVFYGMKALDGGALEDKASDPQSALGLLIGSDYRPLNWCPEKT
CCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
QKVELFDPAGAVTKTLEKPEDISSVCEIMMGAFSMEGIEESSFKKSLAAHGPSGGPIVIL
CEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEE
EQVPGKPVFRVKGMPFSSPMLSKALDRLAVP
ECCCCCCEEEECCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKSTFYLKIGMMVLALVGVFYGMKALDGGALEDKASDPQSALGLLIGSDYRPLNWCPEKT
CCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
QKVELFDPAGAVTKTLEKPEDISSVCEIMMGAFSMEGIEESSFKKSLAAHGPSGGPIVIL
CEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEE
EQVPGKPVFRVKGMPFSSPMLSKALDRLAVP
ECCCCCCEEEECCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA