Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521728

Identifier: 42521728

GI number: 42521728

Start: 78886

End: 79290

Strand: Direct

Name: 42521728

Synonym: Bd0083

Alternate gene names: NA

Gene position: 78886-79290 (Clockwise)

Preceding gene: 42521725

Following gene: 42521729

Centisome position: 2.09

GC content: 45.43

Gene sequence:

>405_bases
ATGAGACAAATTTTTACTTTGCTGGTGCTGTTTTTGGTTCTAATGACCGTAAATGCTGGAGCGGCGCCTGCGCGCAAGCT
GAAGATGTTTACTCCCGAGACCAAAAAATACGTCGTTGTTTCTGTTTTGGATTATCAGGGACTGACGCTTTCTGAAAGCT
GTTTAAAGAATGGCAAAATGAACTGCGACGCCTGGAAAGCGGCACAGACCAAGTTGGATGTGGCGAAGACTCCGAATGTG
GGTGTGATCGGCAATCCAGCCGCTCGTTATTGCCTTTCACATAAGGCTTTGAATCGTATTCTTCTTGATGCCAAAAAAGC
AGAGTACGATTACTGCGTTTTTCCGGACGGCTCGGTGATTGATTCGTGGACTCTTTATAACAAACACTTTTCCAAGAAGC
AGTAG

Upstream 100 bases:

>100_bases
AATGCCCGATTGGTTTACGGTACTTAGATCTGGCTGGTCTATGGCCCAGTTTTGAGTTGGCACCATTCCTTAAGATCTTC
CGCTCTTTCATCATATCAAT

Downstream 100 bases:

>100_bases
GTTGAGGCAATGAAGAGACTGTTGGTGGCATTTTCAATTCTGTTCGGAGCCAGTACAACGCTGGCCGAATATGGAATGAT
CCCGCATTCCCAAATAAAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MRQIFTLLVLFLVLMTVNAGAAPARKLKMFTPETKKYVVVSVLDYQGLTLSESCLKNGKMNCDAWKAAQTKLDVAKTPNV
GVIGNPAARYCLSHKALNRILLDAKKAEYDYCVFPDGSVIDSWTLYNKHFSKKQ

Sequences:

>Translated_134_residues
MRQIFTLLVLFLVLMTVNAGAAPARKLKMFTPETKKYVVVSVLDYQGLTLSESCLKNGKMNCDAWKAAQTKLDVAKTPNV
GVIGNPAARYCLSHKALNRILLDAKKAEYDYCVFPDGSVIDSWTLYNKHFSKKQ
>Mature_134_residues
MRQIFTLLVLFLVLMTVNAGAAPARKLKMFTPETKKYVVVSVLDYQGLTLSESCLKNGKMNCDAWKAAQTKLDVAKTPNV
GVIGNPAARYCLSHKALNRILLDAKKAEYDYCVFPDGSVIDSWTLYNKHFSKKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14992; Mature: 14992

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQIFTLLVLFLVLMTVNAGAAPARKLKMFTPETKKYVVVSVLDYQGLTLSESCLKNGKM
CHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCEECHHHHHCCCC
NCDAWKAAQTKLDVAKTPNVGVIGNPAARYCLSHKALNRILLDAKKAEYDYCVFPDGSVI
CCCHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEE
DSWTLYNKHFSKKQ
CCCHHHHHHCCCCC
>Mature Secondary Structure
MRQIFTLLVLFLVLMTVNAGAAPARKLKMFTPETKKYVVVSVLDYQGLTLSESCLKNGKM
CHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCEECHHHHHCCCC
NCDAWKAAQTKLDVAKTPNVGVIGNPAARYCLSHKALNRILLDAKKAEYDYCVFPDGSVI
CCCHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEE
DSWTLYNKHFSKKQ
CCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA