| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42521728
Identifier: 42521728
GI number: 42521728
Start: 78886
End: 79290
Strand: Direct
Name: 42521728
Synonym: Bd0083
Alternate gene names: NA
Gene position: 78886-79290 (Clockwise)
Preceding gene: 42521725
Following gene: 42521729
Centisome position: 2.09
GC content: 45.43
Gene sequence:
>405_bases ATGAGACAAATTTTTACTTTGCTGGTGCTGTTTTTGGTTCTAATGACCGTAAATGCTGGAGCGGCGCCTGCGCGCAAGCT GAAGATGTTTACTCCCGAGACCAAAAAATACGTCGTTGTTTCTGTTTTGGATTATCAGGGACTGACGCTTTCTGAAAGCT GTTTAAAGAATGGCAAAATGAACTGCGACGCCTGGAAAGCGGCACAGACCAAGTTGGATGTGGCGAAGACTCCGAATGTG GGTGTGATCGGCAATCCAGCCGCTCGTTATTGCCTTTCACATAAGGCTTTGAATCGTATTCTTCTTGATGCCAAAAAAGC AGAGTACGATTACTGCGTTTTTCCGGACGGCTCGGTGATTGATTCGTGGACTCTTTATAACAAACACTTTTCCAAGAAGC AGTAG
Upstream 100 bases:
>100_bases AATGCCCGATTGGTTTACGGTACTTAGATCTGGCTGGTCTATGGCCCAGTTTTGAGTTGGCACCATTCCTTAAGATCTTC CGCTCTTTCATCATATCAAT
Downstream 100 bases:
>100_bases GTTGAGGCAATGAAGAGACTGTTGGTGGCATTTTCAATTCTGTTCGGAGCCAGTACAACGCTGGCCGAATATGGAATGAT CCCGCATTCCCAAATAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MRQIFTLLVLFLVLMTVNAGAAPARKLKMFTPETKKYVVVSVLDYQGLTLSESCLKNGKMNCDAWKAAQTKLDVAKTPNV GVIGNPAARYCLSHKALNRILLDAKKAEYDYCVFPDGSVIDSWTLYNKHFSKKQ
Sequences:
>Translated_134_residues MRQIFTLLVLFLVLMTVNAGAAPARKLKMFTPETKKYVVVSVLDYQGLTLSESCLKNGKMNCDAWKAAQTKLDVAKTPNV GVIGNPAARYCLSHKALNRILLDAKKAEYDYCVFPDGSVIDSWTLYNKHFSKKQ >Mature_134_residues MRQIFTLLVLFLVLMTVNAGAAPARKLKMFTPETKKYVVVSVLDYQGLTLSESCLKNGKMNCDAWKAAQTKLDVAKTPNV GVIGNPAARYCLSHKALNRILLDAKKAEYDYCVFPDGSVIDSWTLYNKHFSKKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14992; Mature: 14992
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQIFTLLVLFLVLMTVNAGAAPARKLKMFTPETKKYVVVSVLDYQGLTLSESCLKNGKM CHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCEECHHHHHCCCC NCDAWKAAQTKLDVAKTPNVGVIGNPAARYCLSHKALNRILLDAKKAEYDYCVFPDGSVI CCCHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEE DSWTLYNKHFSKKQ CCCHHHHHHCCCCC >Mature Secondary Structure MRQIFTLLVLFLVLMTVNAGAAPARKLKMFTPETKKYVVVSVLDYQGLTLSESCLKNGKM CHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCEECHHHHHCCCC NCDAWKAAQTKLDVAKTPNVGVIGNPAARYCLSHKALNRILLDAKKAEYDYCVFPDGSVI CCCHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEE DSWTLYNKHFSKKQ CCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA