Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521729

Identifier: 42521729

GI number: 42521729

Start: 79300

End: 80421

Strand: Direct

Name: 42521729

Synonym: Bd0084

Alternate gene names: NA

Gene position: 79300-80421 (Clockwise)

Preceding gene: 42521728

Following gene: 42521730

Centisome position: 2.1

GC content: 49.38

Gene sequence:

>1122_bases
ATGAAGAGACTGTTGGTGGCATTTTCAATTCTGTTCGGAGCCAGTACAACGCTGGCCGAATATGGAATGATCCCGCATTC
CCAAATAAAGTATGGAGAGGGCTACGCCTTAAAGGGTGAATCCACTGTGCAAGTGACTAATATGCCAAAGGTGAGATCTC
AGGACAGCTTCGGGATCTGTTATGCTGCGGTGGCGGCAGTGCTGGTGGATGAGGCAAACTGTGTGCAAAGTGGAAATGCC
AGCTGTGCCACTGCTCCGGATTCACAAAGGGTCTCGGCTTTGGATGTCACTCGGTACAGCCGCGCCCCTGAAGAAGGCGC
GGATGGGGAAATGTGGCGTGACTACAAGGGACTAAACGAGGGAGGTATGCCCGTCTTCACTCTTTTGAATATCAACAAAG
CCAAAGATGCCGTCAGTGAGCAGTGCGCTCCAACGGATCAGATCGTCGCCAGGGCTGGCAGCGAACAGGCGGCTCAGGAT
CTGGAAATCGCCATGTGGAAGTCGCTGAAAGATTCTTATGAGAGCTTCAGAAAGAAAAATGCCGAATGTACTGAGTGTGG
TCTTGAGTATGCCACTGCCAAAGCCAACGATATTAAACAGAATTACAATCTGAAAGCTTCGAACAAAGAGATTCTGGATG
CGTTTTCACAAGAGTCCTATTCTTTGTTCCTGGATAAACTTTTGATTCCTAAAGAATGCCGTAAGATGTCGGACATGATC
AGTCTTGAGGGTAAGTGGGCGGTAAAGTCCTTCCCTATGGAAGGTGAAAAAGGCGACTACAAGTCGTCCATCAACAAAGT
CAAAGAAGTCCTTACACAAAAAAGACCCTTGGCCCTTAGCTTCTGCGCTCAAGATCCTCTGTCGGTGAAATCCAACAAAG
CTTGTGGAGAAATCAAGGACGCTTCGGGGAACGTGTCCGGTGCGGGTCACGCGGTGGTGATCAAAGGCTATCGCGAAATC
TGTAATTCCAAAGGTGTCTGCCGTCAGGAACTTCAGGTGCAAAATTCCTGGGGTGAAGGCTGGCAGAAATCAAATGATGA
CGGCTGGGTGGATGCAAAAGAGCTTCTGGATCGCACCTTCTATGAGACCTACGCTTTAAACTGGTTGCAGCCTCGCAGCT
AA

Upstream 100 bases:

>100_bases
AAAAGCAGAGTACGATTACTGCGTTTTTCCGGACGGCTCGGTGATTGATTCGTGGACTCTTTATAACAAACACTTTTCCA
AGAAGCAGTAGGTTGAGGCA

Downstream 100 bases:

>100_bases
ACTTAAAATACAAGGGAAGCTCAACTTGACTAACTCCATGAGTCCCCATAAATTCGTCGGCCTATGAACAAAGAATTTAT
GTTAAGAGCCATCGAGCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MKRLLVAFSILFGASTTLAEYGMIPHSQIKYGEGYALKGESTVQVTNMPKVRSQDSFGICYAAVAAVLVDEANCVQSGNA
SCATAPDSQRVSALDVTRYSRAPEEGADGEMWRDYKGLNEGGMPVFTLLNINKAKDAVSEQCAPTDQIVARAGSEQAAQD
LEIAMWKSLKDSYESFRKKNAECTECGLEYATAKANDIKQNYNLKASNKEILDAFSQESYSLFLDKLLIPKECRKMSDMI
SLEGKWAVKSFPMEGEKGDYKSSINKVKEVLTQKRPLALSFCAQDPLSVKSNKACGEIKDASGNVSGAGHAVVIKGYREI
CNSKGVCRQELQVQNSWGEGWQKSNDDGWVDAKELLDRTFYETYALNWLQPRS

Sequences:

>Translated_373_residues
MKRLLVAFSILFGASTTLAEYGMIPHSQIKYGEGYALKGESTVQVTNMPKVRSQDSFGICYAAVAAVLVDEANCVQSGNA
SCATAPDSQRVSALDVTRYSRAPEEGADGEMWRDYKGLNEGGMPVFTLLNINKAKDAVSEQCAPTDQIVARAGSEQAAQD
LEIAMWKSLKDSYESFRKKNAECTECGLEYATAKANDIKQNYNLKASNKEILDAFSQESYSLFLDKLLIPKECRKMSDMI
SLEGKWAVKSFPMEGEKGDYKSSINKVKEVLTQKRPLALSFCAQDPLSVKSNKACGEIKDASGNVSGAGHAVVIKGYREI
CNSKGVCRQELQVQNSWGEGWQKSNDDGWVDAKELLDRTFYETYALNWLQPRS
>Mature_373_residues
MKRLLVAFSILFGASTTLAEYGMIPHSQIKYGEGYALKGESTVQVTNMPKVRSQDSFGICYAAVAAVLVDEANCVQSGNA
SCATAPDSQRVSALDVTRYSRAPEEGADGEMWRDYKGLNEGGMPVFTLLNINKAKDAVSEQCAPTDQIVARAGSEQAAQD
LEIAMWKSLKDSYESFRKKNAECTECGLEYATAKANDIKQNYNLKASNKEILDAFSQESYSLFLDKLLIPKECRKMSDMI
SLEGKWAVKSFPMEGEKGDYKSSINKVKEVLTQKRPLALSFCAQDPLSVKSNKACGEIKDASGNVSGAGHAVVIKGYREI
CNSKGVCRQELQVQNSWGEGWQKSNDDGWVDAKELLDRTFYETYALNWLQPRS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41135; Mature: 41135

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLVAFSILFGASTTLAEYGMIPHSQIKYGEGYALKGESTVQVTNMPKVRSQDSFGIC
CCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCHHH
YAAVAAVLVDEANCVQSGNASCATAPDSQRVSALDVTRYSRAPEEGADGEMWRDYKGLNE
HHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCC
GGMPVFTLLNINKAKDAVSEQCAPTDQIVARAGSEQAAQDLEIAMWKSLKDSYESFRKKN
CCCCEEEEEECCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
AECTECGLEYATAKANDIKQNYNLKASNKEILDAFSQESYSLFLDKLLIPKECRKMSDMI
CCHHHHCHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SLEGKWAVKSFPMEGEKGDYKSSINKVKEVLTQKRPLALSFCAQDPLSVKSNKACGEIKD
HCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCC
ASGNVSGAGHAVVIKGYREICNSKGVCRQELQVQNSWGEGWQKSNDDGWVDAKELLDRTF
CCCCCCCCCCEEEEECHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
YETYALNWLQPRS
HHHHHHCCCCCCC
>Mature Secondary Structure
MKRLLVAFSILFGASTTLAEYGMIPHSQIKYGEGYALKGESTVQVTNMPKVRSQDSFGIC
CCHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEECCCCEEEEECCCCCCCCCCCHHH
YAAVAAVLVDEANCVQSGNASCATAPDSQRVSALDVTRYSRAPEEGADGEMWRDYKGLNE
HHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCCCC
GGMPVFTLLNINKAKDAVSEQCAPTDQIVARAGSEQAAQDLEIAMWKSLKDSYESFRKKN
CCCCEEEEEECCHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
AECTECGLEYATAKANDIKQNYNLKASNKEILDAFSQESYSLFLDKLLIPKECRKMSDMI
CCHHHHCHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SLEGKWAVKSFPMEGEKGDYKSSINKVKEVLTQKRPLALSFCAQDPLSVKSNKACGEIKD
HCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCC
ASGNVSGAGHAVVIKGYREICNSKGVCRQELQVQNSWGEGWQKSNDDGWVDAKELLDRTF
CCCCCCCCCCEEEEECHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH
YETYALNWLQPRS
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA