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The map label for this gene is rpmE

Identifier: 42521714

GI number: 42521714

Start: 62139

End: 62384

Strand: Direct

Name: rpmE

Synonym: Bd0068

Alternate gene names: 42521714

Gene position: 62139-62384 (Clockwise)

Preceding gene: 42521712

Following gene: 42521715

Centisome position: 1.64

GC content: 38.62

Gene sequence:

>246_bases
ATGAAACAAAACCTACACCCAAAAGTAAATACTGTTGTATTTAAAGATATCTCTTGCGACTTCAGTTTCTTGGGAACATC
TACTCTGCACTCTTCCGAAACTGTTAAATGGGAAGATGGTAAAGAATATCCACTAATCAAAGTTGAGATCTCTTCTGCAT
CTCACCCGTTCTTCACTGGTAAGCAACGTGTGATGGATACTGAAGGTCGTATCGATCGTTTCAAAAAACGTTACGGCAAG
AAGTAA

Upstream 100 bases:

>100_bases
CTAAAAAAAGCAGCGATTTCTGCTCGACACGGGGTAGTCAGTATGTTACATCCTTACAGCTTAAGACCCATAGGTTAAAT
TATTTAGAAGGAATCAGGTC

Downstream 100 bases:

>100_bases
ATTTCAGACCTCCGTTCGGAGGACGTTCTTGTATGAAATGCGGTTCAATCTTCGAACCGCATTTTCGTTTTCAGCGATGG
TCCCAATCCCGATCAGCATG

Product: 50S ribosomal protein L31

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MKQNLHPKVNTVVFKDISCDFSFLGTSTLHSSETVKWEDGKEYPLIKVEISSASHPFFTGKQRVMDTEGRIDRFKKRYGK
K

Sequences:

>Translated_81_residues
MKQNLHPKVNTVVFKDISCDFSFLGTSTLHSSETVKWEDGKEYPLIKVEISSASHPFFTGKQRVMDTEGRIDRFKKRYGK
K
>Mature_81_residues
MKQNLHPKVNTVVFKDISCDFSFLGTSTLHSSETVKWEDGKEYPLIKVEISSASHPFFTGKQRVMDTEGRIDRFKKRYGK
K

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=80, Percent_Identity=43.75, Blast_Score=75, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_BDEBA (Q6MRL0)

Other databases:

- EMBL:   BX842646
- RefSeq:   NP_967094.1
- ProteinModelPortal:   Q6MRL0
- SMR:   Q6MRL0
- GeneID:   2733575
- GenomeReviews:   BX842601_GR
- KEGG:   bba:Bd0068
- NMPDR:   fig|264462.1.peg.64
- HOGENOM:   HBG610087
- OMA:   QFLTRST
- PhylomeDB:   Q6MRL0
- BioCyc:   BBAC264462:BD0068-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 9382; Mature: 9382

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQNLHPKVNTVVFKDISCDFSFLGTSTLHSSETVKWEDGKEYPLIKVEISSASHPFFTG
CCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCEECC
KQRVMDTEGRIDRFKKRYGKK
CCEEECCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKQNLHPKVNTVVFKDISCDFSFLGTSTLHSSETVKWEDGKEYPLIKVEISSASHPFFTG
CCCCCCCCCEEEEEECCCCCEEECCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCEECC
KQRVMDTEGRIDRFKKRYGKK
CCEEECCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA