Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42521710

Identifier: 42521710

GI number: 42521710

Start: 57326

End: 58705

Strand: Direct

Name: 42521710

Synonym: Bd0063

Alternate gene names: NA

Gene position: 57326-58705 (Clockwise)

Preceding gene: 42521709

Following gene: 42521712

Centisome position: 1.52

GC content: 53.33

Gene sequence:

>1380_bases
GTGGCATCAATCAAGGATGAATACATGATGAAAAAACTCGTTATCTTACTAGCGTGCCTAGGTCTGGCATTCCAAGTAAC
AAGCTGTACGTCTAAAGATAGCCAAGCAGATGCGGAAGTTGCTTCCGACTTCGATTCCGCAGACCTTGAAAAACTAGAAG
GTGATGACGCCCTTGAAATTGCTGGTGACGACTCTTTGGCCAGCGACCAACTTCCAGAAGATGCTCTGGGTGAAACCACC
ACGACCACCGAAACAACCACAACAACTGCTGAAACGACTCTAGGTGATGATCAGGCGACAACCGAACAGACCGACGTCGC
AACAACCACCGAAACATTGCCAGCAGATCCGTTTGCAGAAGCACCGGCGGCGGACGTTCCGGCTCCGACAACGACTGTGG
CTGAAACAACGACCGCGACAGACACTTCTTCCAACTCTGTTTTTGAAAGCTCTACGGTGACTGAATCCTCCACAACAGTG
GTTGATTCCTCTTCTGAGGCTCCGAAGAAGGCCAGCGCGCCTTTGCAGAAGGTGGCAACGACTCCTTGGAAAGCCGGCGG
CACTTGGTTCAACACCGTTTACTTCGCTCGTCCGGGTGACACTCTGAAGGGTATCAGTCAGATGATCTATGGCGCTGACA
AGCGCAAAGAACTGAAAAAAGGCAATCCGACCTTCCATTCCCGTGATGTTCGTGCCGGTGACAAGGTTTATTACAACTCT
CCCAACCGTCCGGACGATTCTGCCCGCATGATCACTTACTACGAAGACAACGGCATTGCGCCAGAGACTTACGTGGCTAA
ATCCGGAGACAATATCAGAACTGTTTCCAAAAACCTTCTGGGTTATGACAATGCCTGGAAAGAAGTTTGGTCATCCAACT
CTGTAGATTCCAAAGGCAACATCGCAGAAGGCACTGAGCTTCGATTCTGGAGAGGCGGCGCTGTCGCTGCAGCTCCGGCT
CCGGCGCAACCTGCGATGGAACAACCGCACCAGGAAGTGGCTGGCAACATGGCACAGGCTCCGGCAGAAGAGATCCCGGC
TCCACCAATGCCGGAAGATCCAATGGCTCAGCAACAGGCTCAGATGGACATCCCGCCTCCGCCGATGGAGCCCGCGGGTG
ATATGGCTCCGCCTCCTCCGCCGCCAGACATGGCTCAGGACATGGCGCCACCTCCACCACCACCAGTGGAAGCAATCAAC
CCTCCAGCTCCGCAAGTGGCTGAAGAAGCTCCGACCGGCATGGACAACGACACAACAATGGCTTTGGCAGTTGTTGGTCT
GGCAGCCGCAGGTTTGGCAGTCCTGATTGTGATGAGAAAGAAAAGAAAACAGAAAGAGCTTGAACAACAGGCGATGGACA
ACACTCACGTAGGAACATAA

Upstream 100 bases:

>100_bases
AGATCCACTAGATCAAAAGTCCAGTGATTTTCTTAGTGTTTGCATGACTTCGATCTTGTGCTTAGATTGTTAATAACGCT
TAACTGAAACAGTATGTTTC

Downstream 100 bases:

>100_bases
TCAGTTCCCGGGTTCTCCAAAAAAGAAAAGAGCGAGTTTTCACTCGCTCTTTTTGTTTTTGCGGATCTTATCCGACTTTT
TTAAAGATCGTGTCCATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MASIKDEYMMKKLVILLACLGLAFQVTSCTSKDSQADAEVASDFDSADLEKLEGDDALEIAGDDSLASDQLPEDALGETT
TTTETTTTTAETTLGDDQATTEQTDVATTTETLPADPFAEAPAADVPAPTTTVAETTTATDTSSNSVFESSTVTESSTTV
VDSSSEAPKKASAPLQKVATTPWKAGGTWFNTVYFARPGDTLKGISQMIYGADKRKELKKGNPTFHSRDVRAGDKVYYNS
PNRPDDSARMITYYEDNGIAPETYVAKSGDNIRTVSKNLLGYDNAWKEVWSSNSVDSKGNIAEGTELRFWRGGAVAAAPA
PAQPAMEQPHQEVAGNMAQAPAEEIPAPPMPEDPMAQQQAQMDIPPPPMEPAGDMAPPPPPPDMAQDMAPPPPPPVEAIN
PPAPQVAEEAPTGMDNDTTMALAVVGLAAAGLAVLIVMRKKRKQKELEQQAMDNTHVGT

Sequences:

>Translated_459_residues
MASIKDEYMMKKLVILLACLGLAFQVTSCTSKDSQADAEVASDFDSADLEKLEGDDALEIAGDDSLASDQLPEDALGETT
TTTETTTTTAETTLGDDQATTEQTDVATTTETLPADPFAEAPAADVPAPTTTVAETTTATDTSSNSVFESSTVTESSTTV
VDSSSEAPKKASAPLQKVATTPWKAGGTWFNTVYFARPGDTLKGISQMIYGADKRKELKKGNPTFHSRDVRAGDKVYYNS
PNRPDDSARMITYYEDNGIAPETYVAKSGDNIRTVSKNLLGYDNAWKEVWSSNSVDSKGNIAEGTELRFWRGGAVAAAPA
PAQPAMEQPHQEVAGNMAQAPAEEIPAPPMPEDPMAQQQAQMDIPPPPMEPAGDMAPPPPPPDMAQDMAPPPPPPVEAIN
PPAPQVAEEAPTGMDNDTTMALAVVGLAAAGLAVLIVMRKKRKQKELEQQAMDNTHVGT
>Mature_458_residues
ASIKDEYMMKKLVILLACLGLAFQVTSCTSKDSQADAEVASDFDSADLEKLEGDDALEIAGDDSLASDQLPEDALGETTT
TTETTTTTAETTLGDDQATTEQTDVATTTETLPADPFAEAPAADVPAPTTTVAETTTATDTSSNSVFESSTVTESSTTVV
DSSSEAPKKASAPLQKVATTPWKAGGTWFNTVYFARPGDTLKGISQMIYGADKRKELKKGNPTFHSRDVRAGDKVYYNSP
NRPDDSARMITYYEDNGIAPETYVAKSGDNIRTVSKNLLGYDNAWKEVWSSNSVDSKGNIAEGTELRFWRGGAVAAAPAP
AQPAMEQPHQEVAGNMAQAPAEEIPAPPMPEDPMAQQQAQMDIPPPPMEPAGDMAPPPPPPDMAQDMAPPPPPPVEAINP
PAPQVAEEAPTGMDNDTTMALAVVGLAAAGLAVLIVMRKKRKQKELEQQAMDNTHVGT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48621; Mature: 48490

Theoretical pI: Translated: 4.05; Mature: 4.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASIKDEYMMKKLVILLACLGLAFQVTSCTSKDSQADAEVASDFDSADLEKLEGDDALEI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCCCEEE
AGDDSLASDQLPEDALGETTTTTETTTTTAETTLGDDQATTEQTDVATTTETLPADPFAE
CCCCCCCCCCCCHHHCCCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APAADVPAPTTTVAETTTATDTSSNSVFESSTVTESSTTVVDSSSEAPKKASAPLQKVAT
CCCCCCCCCCCHHCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCHHHCCHHHHHC
TPWKAGGTWFNTVYFARPGDTLKGISQMIYGADKRKELKKGNPTFHSRDVRAGDKVYYNS
CCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCEEEECC
PNRPDDSARMITYYEDNGIAPETYVAKSGDNIRTVSKNLLGYDNAWKEVWSSNSVDSKGN
CCCCCCCCEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCC
IAEGTELRFWRGGAVAAAPAPAQPAMEQPHQEVAGNMAQAPAEEIPAPPMPEDPMAQQQA
CCCCCEEEEECCCEEECCCCCCCHHHHCCHHHHHCHHHHCCHHHCCCCCCCCCHHHHHHH
QMDIPPPPMEPAGDMAPPPPPPDMAQDMAPPPPPPVEAINPPAPQVAEEAPTGMDNDTTM
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHH
ALAVVGLAAAGLAVLIVMRKKRKQKELEQQAMDNTHVGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ASIKDEYMMKKLVILLACLGLAFQVTSCTSKDSQADAEVASDFDSADLEKLEGDDALEI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCCCEEE
AGDDSLASDQLPEDALGETTTTTETTTTTAETTLGDDQATTEQTDVATTTETLPADPFAE
CCCCCCCCCCCCHHHCCCCCCCCCCEECCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APAADVPAPTTTVAETTTATDTSSNSVFESSTVTESSTTVVDSSSEAPKKASAPLQKVAT
CCCCCCCCCCCHHCCCCCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCHHHCCHHHHHC
TPWKAGGTWFNTVYFARPGDTLKGISQMIYGADKRKELKKGNPTFHSRDVRAGDKVYYNS
CCCCCCCCEEEEEEEECCCHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCEEEECC
PNRPDDSARMITYYEDNGIAPETYVAKSGDNIRTVSKNLLGYDNAWKEVWSSNSVDSKGN
CCCCCCCCEEEEEECCCCCCCCCEEECCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCC
IAEGTELRFWRGGAVAAAPAPAQPAMEQPHQEVAGNMAQAPAEEIPAPPMPEDPMAQQQA
CCCCCEEEEECCCEEECCCCCCCHHHHCCHHHHHCHHHHCCHHHCCCCCCCCCHHHHHHH
QMDIPPPPMEPAGDMAPPPPPPDMAQDMAPPPPPPVEAINPPAPQVAEEAPTGMDNDTTM
CCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHH
ALAVVGLAAAGLAVLIVMRKKRKQKELEQQAMDNTHVGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA