| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42521698
Identifier: 42521698
GI number: 42521698
Start: 43882
End: 44325
Strand: Direct
Name: 42521698
Synonym: Bd0050
Alternate gene names: NA
Gene position: 43882-44325 (Clockwise)
Preceding gene: 42521697
Following gene: 42521699
Centisome position: 1.16
GC content: 52.03
Gene sequence:
>444_bases ATGATGAAGACCTTCGTCTGGGTATTCCTTCTTGCATCGACGCTTTTTTTTGCTGGTTGTCGCACCGGTGGGGTGATCTT GCGTGAAACCCCGCTCAACCTGAGTGAGACCCGTCGCGCGATTGTGGCTGTGATTGGTGAACCCAAATCCATCAGTCAGA ACGGGCGCGAGATGACGTCTCAGTACTACGACAAAAAAGGCAAGAATATCGACAAGATGGATATGGCCAGAGAACGTTTT TACACCCATGTCACTGTTCTTGGTGACCGCCGTCCTTACGATGTTCAGGTCCAGGTTCTGGTCGAAGGTCGTAATGAAGA TGGCGGTTTTGACCTGCTTGACCGCGACGACGACAAAGCCGCGCCCATCGCGGAAAAGATCCGCCAGTCCCTTAACCAAA GTCGCGACAGTCGTAACGTCATTGACGACTTCCGTTCCTTCTAA
Upstream 100 bases:
>100_bases CTATTCCGTTTAAAGTAATGCAATCCATGACTCACCATCCGTTAACTGACAAAGGTATCAAGATGTTCATGGATGACTGG AACAAGGCTCAGAAGAAATA
Downstream 100 bases:
>100_bases ATACGATAAAGGCTAGTCAGAAATGACTATTCTTCAAATGAGGTGACTGTTGCAAGGAATGCGACTGAAGCGGTTCATAT TACCGCTCCTGGTATTAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MMKTFVWVFLLASTLFFAGCRTGGVILRETPLNLSETRRAIVAVIGEPKSISQNGREMTSQYYDKKGKNIDKMDMARERF YTHVTVLGDRRPYDVQVQVLVEGRNEDGGFDLLDRDDDKAAPIAEKIRQSLNQSRDSRNVIDDFRSF
Sequences:
>Translated_147_residues MMKTFVWVFLLASTLFFAGCRTGGVILRETPLNLSETRRAIVAVIGEPKSISQNGREMTSQYYDKKGKNIDKMDMARERF YTHVTVLGDRRPYDVQVQVLVEGRNEDGGFDLLDRDDDKAAPIAEKIRQSLNQSRDSRNVIDDFRSF >Mature_147_residues MMKTFVWVFLLASTLFFAGCRTGGVILRETPLNLSETRRAIVAVIGEPKSISQNGREMTSQYYDKKGKNIDKMDMARERF YTHVTVLGDRRPYDVQVQVLVEGRNEDGGFDLLDRDDDKAAPIAEKIRQSLNQSRDSRNVIDDFRSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16856; Mature: 16856
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKTFVWVFLLASTLFFAGCRTGGVILRETPLNLSETRRAIVAVIGEPKSISQNGREMTS CCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHEECCCCCCHHHHHHHHH QYYDKKGKNIDKMDMARERFYTHVTVLGDRRPYDVQVQVLVEGRNEDGGFDLLDRDDDKA HHHHHCCCCCCHHHHHHHHHHHHEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC APIAEKIRQSLNQSRDSRNVIDDFRSF CHHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MMKTFVWVFLLASTLFFAGCRTGGVILRETPLNLSETRRAIVAVIGEPKSISQNGREMTS CCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHEECCCCCCHHHHHHHHH QYYDKKGKNIDKMDMARERFYTHVTVLGDRRPYDVQVQVLVEGRNEDGGFDLLDRDDDKA HHHHHCCCCCCHHHHHHHHHHHHEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCC APIAEKIRQSLNQSRDSRNVIDDFRSF CHHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA