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The map label for this gene is hoxV

Identifier: 38637679

GI number: 38637679

Start: 7381

End: 8532

Strand: Direct

Name: hoxV

Synonym: PHG011

Alternate gene names: 38637679

Gene position: 7381-8532 (Clockwise)

Preceding gene: 38637678

Following gene: 38637680

Centisome position: 1.63

GC content: 66.23

Gene sequence:

>1152_bases
ATGACTCGGGCCGTCGCGTTGACCGGTCGGCTGACATTTCGCCCAGGGCAGGTGCCAGGCATTGCGGGTGAGCGCCCCCA
ACTCGCCGAACGATTGCTGCGAGGCCGGCCCGGCGAGGCTGCACCGCACCTCCTGCCGAGGCTCTTTGCTCTGTGCGGCG
AGGCGCACGGCGTCACCGCGGCGCTCGCCGTGAACGCTGCGCTTGGTCGTGTCGCCGCGCCCGAACCGGCGCTGTTTCGA
AGGCTCGCCCATGAGACGGCATGTGAGCATATCCGCCGCATCTGGCTGGACTGGCCGCTGCATCTGGCCAGCGGGCCGGT
GCCGTCCACGTTTAATAGTCGAGTGCCGCAGCGCGAACTGATTGATTGCCCGATGTTGAAGGCGTCGCATTCGGAGTCGG
CCGCCATGCTCGCTTGGCTGGAGAGGGCGGTGCTGGGAACCGCACCCCGCCGCTGGCTGGCGCATTGGCATGAAGACCCG
GCCGGCTGCCTTTCCACATGGGCGACCAAGATCCACACCTGGCCTGCAATGGCAATGCGTCAGTGCATGCAGGTAGCGCA
GGCCATGGCGAGCATGCCTGCCCCCCTGCTGCCGCACGCGTCAACGGACGCCTTGCGCGAACTGGCGCAGTCCTTGGCCG
GGGAGGCGGACTTTCCTTGCCGCCCAAGCTGGCAAGGCCGGGTGTTCGAGACTGGCAGTTGGACACGACTGGGGCTGGCG
GATTGCAGCGCCTTCGGCAACATGTGGTTGCGGCTGGGCGCGCGCATCGCGGAGTTGGTGTTGCTGTCGCTGCGGGACGG
TATGCAGGCATCCGGGGAGGCACATGATTCACCTTGTCTGCAAATGGGCGCATTGGCGCTGGCTCCCGGCCAGGCGTTGG
CATGGAGCGAAATGGCCCGTGGCTTGCTGATGCACTGGGTACGTCTGGTGGATACGCCGCAAGGACCGGTGATCGGCGGC
TATCGGATCATTGCGCCGACTGAATGGAACTTCCATCCGGACGGGGCGGTGGCGCACATGCTCGCCCACCTCGCGCCGTT
CGACGCGGCCGATGTGCGGCGCAGCATCGGCATTCTGGTCGCGGCGTATGATCCTTGCGTCCCCTATACGGTGGAGTTCG
CGGAGTCTTTGGGAGATACTGTCCATGCATGA

Upstream 100 bases:

>100_bases
TACGGGCGTCGCCAGATGCGCCTTTACCGCCAACGTGCGCCCCGCACCGAGACAGGCGGGGGTTTCTGTTCGGTAGGCGT
CGAATTGAGGGGGAATCGTT

Downstream 100 bases:

>100_bases
GCTCAGCCTGGCGGGTGGCATCTTGCAGTTGCTCGAAGACGCTGCGCGGCGCGAACGATTTGCTCGGGTCACGCTCTTGC
GCCTCGAGGCAGGCAAGTTG

Product: HoxV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MTRAVALTGRLTFRPGQVPGIAGERPQLAERLLRGRPGEAAPHLLPRLFALCGEAHGVTAALAVNAALGRVAAPEPALFR
RLAHETACEHIRRIWLDWPLHLASGPVPSTFNSRVPQRELIDCPMLKASHSESAAMLAWLERAVLGTAPRRWLAHWHEDP
AGCLSTWATKIHTWPAMAMRQCMQVAQAMASMPAPLLPHASTDALRELAQSLAGEADFPCRPSWQGRVFETGSWTRLGLA
DCSAFGNMWLRLGARIAELVLLSLRDGMQASGEAHDSPCLQMGALALAPGQALAWSEMARGLLMHWVRLVDTPQGPVIGG
YRIIAPTEWNFHPDGAVAHMLAHLAPFDAADVRRSIGILVAAYDPCVPYTVEFAESLGDTVHA

Sequences:

>Translated_383_residues
MTRAVALTGRLTFRPGQVPGIAGERPQLAERLLRGRPGEAAPHLLPRLFALCGEAHGVTAALAVNAALGRVAAPEPALFR
RLAHETACEHIRRIWLDWPLHLASGPVPSTFNSRVPQRELIDCPMLKASHSESAAMLAWLERAVLGTAPRRWLAHWHEDP
AGCLSTWATKIHTWPAMAMRQCMQVAQAMASMPAPLLPHASTDALRELAQSLAGEADFPCRPSWQGRVFETGSWTRLGLA
DCSAFGNMWLRLGARIAELVLLSLRDGMQASGEAHDSPCLQMGALALAPGQALAWSEMARGLLMHWVRLVDTPQGPVIGG
YRIIAPTEWNFHPDGAVAHMLAHLAPFDAADVRRSIGILVAAYDPCVPYTVEFAESLGDTVHA
>Mature_382_residues
TRAVALTGRLTFRPGQVPGIAGERPQLAERLLRGRPGEAAPHLLPRLFALCGEAHGVTAALAVNAALGRVAAPEPALFRR
LAHETACEHIRRIWLDWPLHLASGPVPSTFNSRVPQRELIDCPMLKASHSESAAMLAWLERAVLGTAPRRWLAHWHEDPA
GCLSTWATKIHTWPAMAMRQCMQVAQAMASMPAPLLPHASTDALRELAQSLAGEADFPCRPSWQGRVFETGSWTRLGLAD
CSAFGNMWLRLGARIAELVLLSLRDGMQASGEAHDSPCLQMGALALAPGQALAWSEMARGLLMHWVRLVDTPQGPVIGGY
RIIAPTEWNFHPDGAVAHMLAHLAPFDAADVRRSIGILVAAYDPCVPYTVEFAESLGDTVHA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HOXV_CUPNH (P31914)

Other databases:

- EMBL:   M96433
- EMBL:   AY305378
- PIR:   B46447
- RefSeq:   NP_942653.1
- ProteinModelPortal:   P31914
- GeneID:   2656432
- GenomeReviews:   AY305378_GR
- KEGG:   reh:PHG011
- HOGENOM:   HBG376013
- OMA:   ECARGRL
- ProtClustDB:   CLSK923797
- BioCyc:   REUT381666:PHG011-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41539; Mature: 41408

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRAVALTGRLTFRPGQVPGIAGERPQLAERLLRGRPGEAAPHLLPRLFALCGEAHGVTA
CCCEEEEECEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHH
ALAVNAALGRVAAPEPALFRRLAHETACEHIRRIWLDWPLHLASGPVPSTFNSRVPQREL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHCCCCHHHH
IDCPMLKASHSESAAMLAWLERAVLGTAPRRWLAHWHEDPAGCLSTWATKIHTWPAMAMR
HCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH
QCMQVAQAMASMPAPLLPHASTDALRELAQSLAGEADFPCRPSWQGRVFETGSWTRLGLA
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHH
DCSAFGNMWLRLGARIAELVLLSLRDGMQASGEAHDSPCLQMGALALAPGQALAWSEMAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHCCCCCHHHHHHHHH
GLLMHWVRLVDTPQGPVIGGYRIIAPTEWNFHPDGAVAHMLAHLAPFDAADVRRSIGILV
HHHHHHHHHHCCCCCCEECCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCEEE
AAYDPCVPYTVEFAESLGDTVHA
EECCCCCCHHHHHHHHCCHHCCC
>Mature Secondary Structure 
TRAVALTGRLTFRPGQVPGIAGERPQLAERLLRGRPGEAAPHLLPRLFALCGEAHGVTA
CCEEEEECEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHHH
ALAVNAALGRVAAPEPALFRRLAHETACEHIRRIWLDWPLHLASGPVPSTFNSRVPQREL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCHHCCCCHHHH
IDCPMLKASHSESAAMLAWLERAVLGTAPRRWLAHWHEDPAGCLSTWATKIHTWPAMAMR
HCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHH
QCMQVAQAMASMPAPLLPHASTDALRELAQSLAGEADFPCRPSWQGRVFETGSWTRLGLA
HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHH
DCSAFGNMWLRLGARIAELVLLSLRDGMQASGEAHDSPCLQMGALALAPGQALAWSEMAR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCHHCCCCCHHHHHHHHH
GLLMHWVRLVDTPQGPVIGGYRIIAPTEWNFHPDGAVAHMLAHLAPFDAADVRRSIGILV
HHHHHHHHHHCCCCCCEECCEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCEEE
AAYDPCVPYTVEFAESLGDTVHA
EECCCCCCHHHHHHHHCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1383192; 12948488