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The map label for this gene is hoxT

Identifier: 38637678

GI number: 38637678

Start: 6845

End: 7384

Strand: Direct

Name: hoxT

Synonym: PHG010

Alternate gene names: 38637678

Gene position: 6845-7384 (Clockwise)

Preceding gene: 38637677

Following gene: 38637679

Centisome position: 1.51

GC content: 58.33

Gene sequence:

>540_bases
ATGTTGCTGGCCAACTATGGAGCCTGTGAAGTGGACCGGGTGCGCCATCTGGAAGAGGCTTTCTGCTGCATTGCGGCAAC
TCGCATGGCCGATATCCCCGTGGTGAACCGCGCGTTGTCGGTGGAAGCATTGGGGTTCGAGCAGTGTGCCGAATCAGCGG
GCGGCTCGGATGGCGAAATGGGGATTCTCATTACTCCCTGGTTCATGAACCTGATTTGGCTAGCGCCATACGGCCCATGC
CTCGGAGAGCGGGATGCGTCGACGCTGCCGGTGGGAAAGACCTGTATGCGACGATTTGGAAGCCACGACTTCGAATTCAT
CGGTGCCTCGGAGCCACAGTTTGGTCCCTACCAATTTTGCTCATTATTTTCGCCGATGTTTGAATTCGCCAACCAGGCTA
GTGCGCGCGCAACCGCGACGGAAGTATTGCGTCTGTTACGGGCGTCGCCAGATGCGCCTTTACCGCCAACGTGCGCCCCG
CACCGAGACAGGCGGGGGTTTCTGTTCGGTAGGCGTCGAATTGAGGGGGAATCGTTATGA

Upstream 100 bases:

>100_bases
TTCATTTTCGGCGCTCCCGGCGCACTGGCGGTGTCCGAATTGCGACGGTGAAGCCGAGCAATTTATGGTGCTCGGTCCGC
AGGCGTGAGAGACTGCAACG

Downstream 100 bases:

>100_bases
CTCGGGCCGTCGCGTTGACCGGTCGGCTGACATTTCGCCCAGGGCAGGTGCCAGGCATTGCGGGTGAGCGCCCCCAACTC
GCCGAACGATTGCTGCGAGG

Product: HoxT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MLLANYGACEVDRVRHLEEAFCCIAATRMADIPVVNRALSVEALGFEQCAESAGGSDGEMGILITPWFMNLIWLAPYGPC
LGERDASTLPVGKTCMRRFGSHDFEFIGASEPQFGPYQFCSLFSPMFEFANQASARATATEVLRLLRASPDAPLPPTCAP
HRDRRGFLFGRRRIEGESL

Sequences:

>Translated_179_residues
MLLANYGACEVDRVRHLEEAFCCIAATRMADIPVVNRALSVEALGFEQCAESAGGSDGEMGILITPWFMNLIWLAPYGPC
LGERDASTLPVGKTCMRRFGSHDFEFIGASEPQFGPYQFCSLFSPMFEFANQASARATATEVLRLLRASPDAPLPPTCAP
HRDRRGFLFGRRRIEGESL
>Mature_179_residues
MLLANYGACEVDRVRHLEEAFCCIAATRMADIPVVNRALSVEALGFEQCAESAGGSDGEMGILITPWFMNLIWLAPYGPC
LGERDASTLPVGKTCMRRFGSHDFEFIGASEPQFGPYQFCSLFSPMFEFANQASARATATEVLRLLRASPDAPLPPTCAP
HRDRRGFLFGRRRIEGESL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HOXT_CUPNH (P31913)

Other databases:

- EMBL:   M96433
- EMBL:   AY305378
- RefSeq:   NP_942652.1
- GeneID:   2656431
- GenomeReviews:   AY305378_GR
- KEGG:   reh:PHG010
- HOGENOM:   HBG376012
- OMA:   ANQASAR
- ProtClustDB:   CLSK923796
- BioCyc:   REUT381666:PHG010-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19713; Mature: 19713

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLANYGACEVDRVRHLEEAFCCIAATRMADIPVVNRALSVEALGFEQCAESAGGSDGEM
CEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCCCCE
GILITPWFMNLIWLAPYGPCLGERDASTLPVGKTCMRRFGSHDFEFIGASEPQFGPYQFC
EEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCHHHHH
SLFSPMFEFANQASARATATEVLRLLRASPDAPLPPTCAPHRDRRGFLFGRRRIEGESL
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MLLANYGACEVDRVRHLEEAFCCIAATRMADIPVVNRALSVEALGFEQCAESAGGSDGEM
CEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHCCCCCCCE
GILITPWFMNLIWLAPYGPCLGERDASTLPVGKTCMRRFGSHDFEFIGASEPQFGPYQFC
EEEECHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCHHHHH
SLFSPMFEFANQASARATATEVLRLLRASPDAPLPPTCAPHRDRRGFLFGRRRIEGESL
HHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1383192; 12948488