| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37681377
Identifier: 37681377
GI number: 37681377
Start: 3282616
End: 3282876
Strand: Direct
Name: 37681377
Synonym: VV3193
Alternate gene names: NA
Gene position: 3282616-3282876 (Clockwise)
Preceding gene: 37681374
Following gene: 37681379
Centisome position: 97.86
GC content: 47.89
Gene sequence:
>261_bases ATGAAAAAATCAAATCTTGCTGTTACTGCTGTTGTTACCGGTTTAATCGCAATGGGTGGCACCATGCTGACTGCGGCACC TGCAATGGCGGCAGAAAAAGAGAAATGCTACGGCGTGGCCAAAGCGGGCAAAAATGACTGCGCCACCAAAACCAGCTCTT GCGCTGGTACGGCAAAAGAAGACAACCAAAAAGACGCTTTCGTGGTTGTTCCTAAAGGCTTATGCGGCAAATTGGCCGGT GGTAATACACAATCTTCTTAA
Upstream 100 bases:
>100_bases AAGTTTTTCCCGCAACTTGCTGTCCTTTTAACCAAGCAAGTGAATCCACTCGGAAGCACGAGCTCAATAAGTAAAGGAAA ATCAGTCTGAGGAAAGAACC
Downstream 100 bases:
>100_bases ACCCCTTATTGAGGTGAACACCACCGCAAAACAGCAGGAGCACAGAGGCTCAACCGTGCTCCTCCTTTCTCACCTCATGT CACACCATCCGCAAATTTTG
Product: putative signal peptide protein
Products: NA
Alternate protein names: Integral Membrane Protein
Number of amino acids: Translated: 86; Mature: 86
Protein sequence:
>86_residues MKKSNLAVTAVVTGLIAMGGTMLTAAPAMAAEKEKCYGVAKAGKNDCATKTSSCAGTAKEDNQKDAFVVVPKGLCGKLAG GNTQSS
Sequences:
>Translated_86_residues MKKSNLAVTAVVTGLIAMGGTMLTAAPAMAAEKEKCYGVAKAGKNDCATKTSSCAGTAKEDNQKDAFVVVPKGLCGKLAG GNTQSS >Mature_86_residues MKKSNLAVTAVVTGLIAMGGTMLTAAPAMAAEKEKCYGVAKAGKNDCATKTSSCAGTAKEDNQKDAFVVVPKGLCGKLAG GNTQSS
Specific function: Unknown
COG id: COG5572
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8569; Mature: 8569
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 9.3 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 4.7 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSNLAVTAVVTGLIAMGGTMLTAAPAMAAEKEKCYGVAKAGKNDCATKTSSCAGTAKE CCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCC DNQKDAFVVVPKGLCGKLAGGNTQSS CCCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MKKSNLAVTAVVTGLIAMGGTMLTAAPAMAAEKEKCYGVAKAGKNDCATKTSSCAGTAKE CCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHCHHHHHHHCCCCCCCCCCCCCCCCCCCCC DNQKDAFVVVPKGLCGKLAGGNTQSS CCCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA