| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37681379
Identifier: 37681379
GI number: 37681379
Start: 3282994
End: 3283869
Strand: Direct
Name: 37681379
Synonym: VV3194
Alternate gene names: NA
Gene position: 3282994-3283869 (Clockwise)
Preceding gene: 37681377
Following gene: 37681380
Centisome position: 97.87
GC content: 48.06
Gene sequence:
>876_bases ATGTCGAACACTGAGTTTCATCCCCATATTGGTGTTGGGCTTAGACTGCCCCATCATGATCATTTTCATCACCATCGACC AGCGTTGTCTTGGTTGGAGATCCACAGCGAAAATTACTTCCAACCCAATTCTTTCCACCGCCAGCAACTCAACCAAATGG CGGAGCATTACCAAATCAGTTGCCACGGGATTGGTTTGTCACTCGGCTCTGTGACTGGGGTTAATCCACAACATTTATTA CGCTTAAAACAGTTGGTTGATGACTTACAACCGTTTTTGGTTTCGGATCATCTCAGCTGGAGCGAAAACGGTGGTCACTA CTTTAATGATTTGCTGCCTTTGCCCTACACAGAGGAAGCACTCGAGGTTTTTTGCCGTAACGTGCTGCATGTGCAAGACG CACTAAAACGGCCGATCTTGATCGAGAATCCTTCCAGCTATCTCAAGTACCAACATTCCACCATCAGTGAATGGCAGTTT TTGACTGAGGTGCAGCGTCGTACCGACTGCCGCTTGTTGCTCGATCTGAACAATGTCTATGTTTCTGCGTTTAACCATGG TTTTGATTGCCAAACCTACCTTGAGGCGATACCAGCAGCGTGCGTTGACGAAATTCACCTTGCCGGCTTCACTATTAAAT CGTTAGAGCAAGGCGAGATCTGGATTGATACCCATAGCCAGCCGGTGTCTGCCGAAGTTTGGCAATTGTATCAGCAGTGG ATTGCCCAGCACGGTAGCCGACACACCTTGATTGAGTGGGATTTGGATTTGCCCCCCGTCGATGTGCTGCTCAACGAAGC GAAAAAAGCCGAAACTCTGTTGCGAGCGTCTCTGCTTCATAACAACCCAATGCACCCTTCATTAGCGTTAGGTTAA
Upstream 100 bases:
>100_bases ACACCACCGCAAAACAGCAGGAGCACAGAGGCTCAACCGTGCTCCTCCTTTCTCACCTCATGTCACACCATCCGCAAATT TTGCCGCAGGGAGTCTAACG
Downstream 100 bases:
>100_bases CAGGAGGCCAAATGCAACTCGCCGAGTTTCAACATCAGTTTCGCCAAGCACTGCATTATCAAGCCAGTGGTGAATCCTGC GGCATTGTCAGTGACCAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MSNTEFHPHIGVGLRLPHHDHFHHHRPALSWLEIHSENYFQPNSFHRQQLNQMAEHYQISCHGIGLSLGSVTGVNPQHLL RLKQLVDDLQPFLVSDHLSWSENGGHYFNDLLPLPYTEEALEVFCRNVLHVQDALKRPILIENPSSYLKYQHSTISEWQF LTEVQRRTDCRLLLDLNNVYVSAFNHGFDCQTYLEAIPAACVDEIHLAGFTIKSLEQGEIWIDTHSQPVSAEVWQLYQQW IAQHGSRHTLIEWDLDLPPVDVLLNEAKKAETLLRASLLHNNPMHPSLALG
Sequences:
>Translated_291_residues MSNTEFHPHIGVGLRLPHHDHFHHHRPALSWLEIHSENYFQPNSFHRQQLNQMAEHYQISCHGIGLSLGSVTGVNPQHLL RLKQLVDDLQPFLVSDHLSWSENGGHYFNDLLPLPYTEEALEVFCRNVLHVQDALKRPILIENPSSYLKYQHSTISEWQF LTEVQRRTDCRLLLDLNNVYVSAFNHGFDCQTYLEAIPAACVDEIHLAGFTIKSLEQGEIWIDTHSQPVSAEVWQLYQQW IAQHGSRHTLIEWDLDLPPVDVLLNEAKKAETLLRASLLHNNPMHPSLALG >Mature_290_residues SNTEFHPHIGVGLRLPHHDHFHHHRPALSWLEIHSENYFQPNSFHRQQLNQMAEHYQISCHGIGLSLGSVTGVNPQHLLR LKQLVDDLQPFLVSDHLSWSENGGHYFNDLLPLPYTEEALEVFCRNVLHVQDALKRPILIENPSSYLKYQHSTISEWQFL TEVQRRTDCRLLLDLNNVYVSAFNHGFDCQTYLEAIPAACVDEIHLAGFTIKSLEQGEIWIDTHSQPVSAEVWQLYQQWI AQHGSRHTLIEWDLDLPPVDVLLNEAKKAETLLRASLLHNNPMHPSLALG
Specific function: Unknown
COG id: COG3220
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0276 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y3194_VIBVY (Q7MGN5)
Other databases:
- EMBL: BA000037 - RefSeq: NP_935988.1 - ProteinModelPortal: Q7MGN5 - SMR: Q7MGN5 - STRING: Q7MGN5 - GeneID: 2626066 - GenomeReviews: BA000037_GR - KEGG: vvy:VV3194 - NMPDR: fig|196600.1.peg.3261 - eggNOG: COG3220 - HOGENOM: HBG306331 - OMA: PLLIDSH - ProtClustDB: PRK05409 - BioCyc: VVUL196600:VV3194-MONOMER - HAMAP: MF_00697 - InterPro: IPR007801 - InterPro: IPR013022 - Gene3D: G3DSA:3.20.20.150
Pfam domain/function: PF05114 DUF692
EC number: NA
Molecular weight: Translated: 33533; Mature: 33402
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTEFHPHIGVGLRLPHHDHFHHHRPALSWLEIHSENYFQPNSFHRQQLNQMAEHYQIS CCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEE CHGIGLSLGSVTGVNPQHLLRLKQLVDDLQPFLVSDHLSWSENGGHYFNDLLPLPYTEEA EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHH LEVFCRNVLHVQDALKRPILIENPSSYLKYQHSTISEWQFLTEVQRRTDCRLLLDLNNVY HHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCEE VSAFNHGFDCQTYLEAIPAACVDEIHLAGFTIKSLEQGEIWIDTHSQPVSAEVWQLYQQW EEECCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCCHHHHHHHHHH IAQHGSRHTLIEWDLDLPPVDVLLNEAKKAETLLRASLLHNNPMHPSLALG HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SNTEFHPHIGVGLRLPHHDHFHHHRPALSWLEIHSENYFQPNSFHRQQLNQMAEHYQIS CCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHEEE CHGIGLSLGSVTGVNPQHLLRLKQLVDDLQPFLVSDHLSWSENGGHYFNDLLPLPYTEEA EEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHH LEVFCRNVLHVQDALKRPILIENPSSYLKYQHSTISEWQFLTEVQRRTDCRLLLDLNNVY HHHHHHHHHHHHHHHCCCEEEECCHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEEECCEE VSAFNHGFDCQTYLEAIPAACVDEIHLAGFTIKSLEQGEIWIDTHSQPVSAEVWQLYQQW EEECCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCCHHHHHHHHHH IAQHGSRHTLIEWDLDLPPVDVLLNEAKKAETLLRASLLHNNPMHPSLALG HHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA