| Definition | Vibrio vulnificus YJ016 chromosome I, complete sequence. |
|---|---|
| Accession | NC_005139 |
| Length | 3,354,505 |
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The map label for this gene is 37681154
Identifier: 37681154
GI number: 37681154
Start: 3049014
End: 3049403
Strand: Direct
Name: 37681154
Synonym: VV2970
Alternate gene names: NA
Gene position: 3049014-3049403 (Clockwise)
Preceding gene: 37681145
Following gene: 37681157
Centisome position: 90.89
GC content: 40.77
Gene sequence:
>390_bases TTGGATGAGCTGAGCGGGGATCCTATCACAATCTCAGCTCGCACACTCAACAAAATCCGCTCCAATTACGATTTGTATCT GGGCTGCGCGACCACATGCTTAAAAAACCAGATAGCCACGGCGATAACAATTAACCAAGGCAATAACTTCAAAACAAACC CGAGCATGCCGAGCAAAATCATCACCACCAGCGCAATACCTGTAGCAGCAAACACTGTCATCATTGTAATCCCCGTCACC AACAAGGTTGCTGCGAAAACCAAAATAAAAATCAACTCTAACATCATCTATCTCCTTTGTTTTCTTGTAAGGAGCAGAAT CTGTACCAACTTTTCAAATTCAAATAACCATTTAAAAAATAAAGAAAAAGCCCTTAAACACAAAAGCTAA
Upstream 100 bases:
>100_bases TGGCAGGTCGCAGAAAACAGGCCTAATGGCGCCAATAGTGCACAAATGGTGGCGATTTTATTACGCATGAGAGTAATACT CCGATTTTACTGAGTTAACC
Downstream 100 bases:
>100_bases GGGCTTCAAGACAAAGCGTAACTTGGTGATTTTTACCACCTAATGGTGAAATTTACACATCCAATTCTTGCGGTATTTTG GCTAAAGCCTGCTGCAACAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 129; Mature: 129
Protein sequence:
>129_residues MDELSGDPITISARTLNKIRSNYDLYLGCATTCLKNQIATAITINQGNNFKTNPSMPSKIITTSAIPVAANTVIIVIPVT NKVAAKTKIKINSNIIYLLCFLVRSRICTNFSNSNNHLKNKEKALKHKS
Sequences:
>Translated_129_residues MDELSGDPITISARTLNKIRSNYDLYLGCATTCLKNQIATAITINQGNNFKTNPSMPSKIITTSAIPVAANTVIIVIPVT NKVAAKTKIKINSNIIYLLCFLVRSRICTNFSNSNNHLKNKEKALKHKS >Mature_129_residues MDELSGDPITISARTLNKIRSNYDLYLGCATTCLKNQIATAITINQGNNFKTNPSMPSKIITTSAIPVAANTVIIVIPVT NKVAAKTKIKINSNIIYLLCFLVRSRICTNFSNSNNHLKNKEKALKHKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14165; Mature: 14165
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDELSGDPITISARTLNKIRSNYDLYLGCATTCLKNQIATAITINQGNNFKTNPSMPSKI CCCCCCCCEEEEHHHHHHHHCCCEEEEEHHHHHHHHCCEEEEEEECCCCEECCCCCCCEE ITTSAIPVAANTVIIVIPVTNKVAAKTKIKINSNIIYLLCFLVRSRICTNFSNSNNHLKN EEECCCCEECCEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCC KEKALKHKS HHHHHCCCC >Mature Secondary Structure MDELSGDPITISARTLNKIRSNYDLYLGCATTCLKNQIATAITINQGNNFKTNPSMPSKI CCCCCCCCEEEEHHHHHHHHCCCEEEEEHHHHHHHHCCEEEEEEECCCCEECCCCCCCEE ITTSAIPVAANTVIIVIPVTNKVAAKTKIKINSNIIYLLCFLVRSRICTNFSNSNNHLKN EEECCCCEECCEEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCC KEKALKHKS HHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA